RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 C1GALT1C1Q96EU7 318 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 ZSWIM3Q96MP5 696 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 WDR92Q96MX6 357 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 ADI1Q9BV57 179 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 KCNK12Q9HB15 430 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 ARNT2Q9HBZ2 717 aa5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 RBM12Q9NTZ6 932 aaKnown RBP5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.64□□□□□ -1.51
CDC42BPA-211ENST00000466538 A0A1W2PR48 441 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 ETV2O00321 342 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 DAPK3O43293 454 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 PHF2O75151 1096 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 KLHL18O94889 574 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 MAP4K4O95819 1239 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 RPLP2P05387 115 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 ZNF28P17035 718 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 LIMS1P48059 325 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 TOP3AQ13472 1001 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 SMAD4Q13485 552 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 UAP1L1Q3KQV9 507 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 C19orf54Q5BKX5 351 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 TRIM68Q6AZZ1 485 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 TRMT10BQ6PF06 316 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 LILRA6Q6PI73 481 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 KLHDC10Q6PID8 442 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 FAM129CQ86XR2 697 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 GLB1L3Q8NCI6 653 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 GPR156Q8NFN8 814 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 NKD2Q969F2 451 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 HDAC10Q969S8 669 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 FAM84AQ96KN4 292 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 LRGUKQ96M69 825 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 TAAR9Q96RI9 348 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 MAP3K14Q99558 947 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 GTPBP4Q9BZE4 634 aaKnown RBP5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 SPATA6Q9NWH7 488 aaPredicted RBP5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 RPTORQ8N122 1335 aa5.63□□□□□ -1.51
CDC42BPA-211ENST00000466538 FAM171A2A8MVW0 826 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 HTRA2O43464 458 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 PLIN1O60240 522 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 PLA2G1BP04054 148 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 ADCY8P40145 1251 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 ETV4P43268 484 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 CCT2P78371 535 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 PURAQ00577 322 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 MGAT5Q09328 741 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 MGAT2Q10469 447 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 MAP9Q49MG5 647 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 PPP4R3AQ6IN85 833 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 CNKSR3Q6P9H4 555 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 SLC4A10Q6U841 1118 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 CHST15Q7LFX5 561 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 SAPCD2Q86UD0 394 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 REXO1L1PQ8IX06 675 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 UNC5BQ8IZJ1 945 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 DIS3LQ8TF46 1054 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 NRG4Q8WWG1 115 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 ZCCHC14Q8WYQ9 949 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 LPPQ93052 612 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 TTC17Q96AE7 1141 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 MVB12AQ96EY5 273 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 FAM193BQ96PV7 902 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 FDXACB1Q9BRP7 624 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 KATNBL1Q9H079 304 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 L2HGDHQ9H9P8 463 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 MAN1C1Q9NR34 630 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 SERPINB13Q9UIV8 391 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 DNM3Q9UQ16 869 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 IPPQ9Y573 584 aa5.62□□□□□ -1.51
CDC42BPA-211ENST00000466538 CCDC154A6NI56 674 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 FARP2O94887 1054 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 LY86O95711 162 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 LTA4HP09960 611 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 TRIM27P14373 513 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 EDNRBP24530 442 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 CD69Q07108 199 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 MESP2Q0VG99 397 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 HDAC1Q13547 482 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 PGS1Q32NB8 556 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 SYDE1Q6ZW31 735 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 TAS1R1Q7RTX1 841 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 SRGAP1Q7Z6B7 1085 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 FAM43AQ8N2R8 423 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 BHLHE22Q8NFJ8 381 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 RIN2Q8WYP3 895 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 AJUBAQ96IF1 538 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 PWWP2AQ96N64 755 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 PPP1R16BQ96T49 567 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 CARD11Q9BXL7 1154 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 ZNF700Q9H0M5 742 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 MAGEL2Q9UJ55 1249 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 CDC42EP3Q9UKI2 254 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 INTUQ9ULD6 942 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 LIMCH1Q9UPQ0 1083 aa5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 CFAP20Q9Y6A4 193 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-211ENST00000466538 FRMPD2Q68DX3 1309 aaPredicted RBP5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 SH3D21A4FU49 640 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 H3BML4 177 aa5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 DDX3XO00571 662 aaKnown RBP eCLIP5.6□□□□□ -1.51
CDC42BPA-211ENST00000466538 HMGCRP04035 888 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms