RNA–Protein interactions for RNA: ENST00000466508.5

PPP1R3F-203, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 1,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-203ENST00000466508 GBP6Q6ZN66 633 aa23.08■■□□□ 1.29
PPP1R3F-203ENST00000466508 INTS8Q75QN2 995 aaKnown RBP23.08■■□□□ 1.29
PPP1R3F-203ENST00000466508 CCDC170Q8IYT3 715 aa23.08■■□□□ 1.29
PPP1R3F-203ENST00000466508 KIF18AQ8NI77 898 aa23.08■■□□□ 1.29
PPP1R3F-203ENST00000466508 ATP8B4Q8TF62 1192 aa23.08■■□□□ 1.29
PPP1R3F-203ENST00000466508 MAML3Q96JK9 1138 aa23.08■■□□□ 1.29
PPP1R3F-203ENST00000466508 GANQ9H2C0 597 aa23.08■■□□□ 1.29
PPP1R3F-203ENST00000466508 CPA4Q9UI42 421 aa23.08■■□□□ 1.29
PPP1R3F-203ENST00000466508 MAFO75444 373 aaPredicted RBP23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 GLRA2P23416 452 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 PON1P27169 355 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 MARK3P27448 753 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 NAMPTP43490 491 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 POLR2FP61218 127 aaKnown RBP23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 GRM1Q13255 1194 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 LAMC2Q13753 1193 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 CYP4F22Q6NT55 531 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 CAPNS2Q96L46 248 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 SMARCAD1Q9H4L7 1026 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 NHEJ1Q9H9Q4 299 aaPredicted RBP23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 NLRC4Q9NPP4 1024 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 GCNT4Q9P109 453 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 SLC15A5A6NIM6 579 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 SNAI1O95863 264 aaPredicted RBP23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 KRT13P13646 458 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 SLC9A1P19634 815 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 ADSSP30520 456 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 CYLC1P35663 651 aaPredicted RBP23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 FMO5P49326 533 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 DPY19L2P1Q6NXN4 242 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 RDH13Q8NBN7 331 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 ASAP3Q8TDY4 903 aa23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 SYN2Q92777 582 aaPredicted RBP23.07■■□□□ 1.28
PPP1R3F-203ENST00000466508 ANKRD63C9JTQ0 380 aa23.06■■□□□ 1.28
PPP1R3F-203ENST00000466508 APBA1Q02410 837 aa23.06■■□□□ 1.28
PPP1R3F-203ENST00000466508 TAF1CQ15572 869 aaPredicted RBP23.06■■□□□ 1.28
PPP1R3F-203ENST00000466508 BRDTQ58F21 947 aaPredicted RBP23.06■■□□□ 1.28
PPP1R3F-203ENST00000466508 SYT10Q6XYQ8 523 aa23.06■■□□□ 1.28
PPP1R3F-203ENST00000466508 TAS1R3Q7RTX0 852 aa23.06■■□□□ 1.28
PPP1R3F-203ENST00000466508 EMID1Q96A84 441 aaPredicted RBP23.06■■□□□ 1.28
PPP1R3F-203ENST00000466508 HNRNPDLO14979 420 aaKnown RBP23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 GH1P01241 217 aa23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 SLC10A3P09131 477 aa23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 TRIM49P0CI25 452 aa23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 TRIM49CP0CI26 452 aa23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 PLCB4Q15147 1175 aa23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 SLC39A4Q6P5W5 647 aa23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 EXOC8Q8IYI6 725 aa23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 ARHGAP20Q9P2F6 1191 aa23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 FBXL5Q9UKA1 691 aa23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 PHLPP2Q6ZVD8 1323 aa23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 ZBTB42B2RXF5 422 aa23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 GAS2O43903 313 aaKnown RBP23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 UCHL3P15374 230 aa23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 KLHDC7AQ5VTJ3 777 aa23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 TINF2Q9BSI4 451 aa23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 SLC5A4Q9NY91 659 aa23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 REXO2Q9Y3B8 237 aaKnown RBP23.05■■□□□ 1.28
PPP1R3F-203ENST00000466508 ACTN1P12814 892 aa23.04■■□□□ 1.28
PPP1R3F-203ENST00000466508 ADCYAP1R1P41586 468 aa23.04■■□□□ 1.28
PPP1R3F-203ENST00000466508 VAMP7P51809 220 aa23.04■■□□□ 1.28
PPP1R3F-203ENST00000466508 CBWD6Q4V339 395 aa23.04■■□□□ 1.28
PPP1R3F-203ENST00000466508 CBWD3Q5JTY5 395 aa23.04■■□□□ 1.28
PPP1R3F-203ENST00000466508 CBWD5Q5RIA9 395 aa23.04■■□□□ 1.28
PPP1R3F-203ENST00000466508 GJC2Q5T442 439 aaPredicted RBP23.04■■□□□ 1.28
PPP1R3F-203ENST00000466508 PPTC7Q8NI37 304 aa23.04■■□□□ 1.28
PPP1R3F-203ENST00000466508 DEPTORQ8TB45 409 aa23.04■■□□□ 1.28
PPP1R3F-203ENST00000466508 CCDC42Q96M95 316 aa23.04■■□□□ 1.28
PPP1R3F-203ENST00000466508 ABHD16BQ9H3Z7 469 aa23.04■■□□□ 1.28
PPP1R3F-203ENST00000466508 LZTFL1Q9NQ48 299 aa23.04■■□□□ 1.28
PPP1R3F-203ENST00000466508 A0A0U1RQJ8 604 aa23.03■■□□□ 1.28
PPP1R3F-203ENST00000466508 LRRIQ4A6NIV6 560 aa23.03■■□□□ 1.28
PPP1R3F-203ENST00000466508 EIF3CLB5ME19 914 aaKnown RBP23.03■■□□□ 1.28
PPP1R3F-203ENST00000466508 INHBEP58166 350 aa23.03■■□□□ 1.28
PPP1R3F-203ENST00000466508 KRT83P78385 493 aa23.03■■□□□ 1.28
PPP1R3F-203ENST00000466508 SFMBT2Q5VUG0 894 aa23.03■■□□□ 1.28
PPP1R3F-203ENST00000466508 IFNL1Q8IU54 200 aa23.03■■□□□ 1.28
PPP1R3F-203ENST00000466508 MSL3Q8N5Y2 521 aaKnown RBP23.03■■□□□ 1.28
PPP1R3F-203ENST00000466508 ZSWIM2Q8NEG5 633 aa23.03■■□□□ 1.28
PPP1R3F-203ENST00000466508 NPLOC4Q8TAT6 608 aa23.03■■□□□ 1.28
PPP1R3F-203ENST00000466508 ATRIPQ8WXE1 791 aa23.03■■□□□ 1.28
PPP1R3F-203ENST00000466508 EIF3CQ99613 913 aaKnown RBP23.03■■□□□ 1.28
PPP1R3F-203ENST00000466508 SIX2Q9NPC8 291 aa23.03■■□□□ 1.28
PPP1R3F-203ENST00000466508 ERAP1Q9NZ08 941 aa23.03■■□□□ 1.28
PPP1R3F-203ENST00000466508 IPO7O95373 1038 aaKnown RBP23.02■■□□□ 1.28
PPP1R3F-203ENST00000466508 PLEKP08567 350 aaPredicted RBP23.02■■□□□ 1.28
PPP1R3F-203ENST00000466508 MCCD1P59942 119 aaPredicted RBP23.02■■□□□ 1.28
PPP1R3F-203ENST00000466508 STRN3Q13033 797 aa23.02■■□□□ 1.28
PPP1R3F-203ENST00000466508 SNRNP35Q16560 246 aaKnown RBP23.02■■□□□ 1.28
PPP1R3F-203ENST00000466508 ARHGAP29Q52LW3 1261 aa23.02■■□□□ 1.28
PPP1R3F-203ENST00000466508 MYRIPQ8NFW9 859 aa23.02■■□□□ 1.28
PPP1R3F-203ENST00000466508 POMGNT1Q8WZA1 660 aa23.02■■□□□ 1.28
PPP1R3F-203ENST00000466508 BICD1Q96G01 975 aa23.02■■□□□ 1.28
PPP1R3F-203ENST00000466508 DNAI1Q9UI46 699 aa23.02■■□□□ 1.28
PPP1R3F-203ENST00000466508 TRPC6Q9Y210 931 aa23.02■■□□□ 1.28
PPP1R3F-203ENST00000466508 IGKV6-21A0A0C4DH24 114 aa23.02■■□□□ 1.28
PPP1R3F-203ENST00000466508 RIOK3O14730 519 aaKnown RBP23.02■■□□□ 1.28
PPP1R3F-203ENST00000466508 HBP1O60381 514 aa23.02■■□□□ 1.28
PPP1R3F-203ENST00000466508 GARTP22102 1010 aa23.02■■□□□ 1.28
PPP1R3F-203ENST00000466508 MYL7Q01449 175 aa23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms