RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 DNAJC10Q8IXB1 793 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 TMEM192Q8IY95 271 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 IFNL3Q8IZI9 196 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 ARHGEF39Q8N4T4 335 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 CNTD1Q8N815 330 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 RNF214Q8ND24 703 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 SLC7A14Q8TBB6 771 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 SLC7A3Q8WY07 619 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 PPM1EQ8WY54 764 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 TTC17Q96AE7 1141 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 MPHOSPH6Q99547 160 aaKnown RBP3.95□□□□□ -1.78
SORT1-202ENST00000466471 RTFDC1Q9BY42 306 aaPredicted RBP3.95□□□□□ -1.78
SORT1-202ENST00000466471 RHOBTB2Q9BYZ6 727 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 RNF208Q9H0X6 261 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 ALDH8A1Q9H2A2 487 aaPredicted RBP3.95□□□□□ -1.78
SORT1-202ENST00000466471 L2HGDHQ9H9P8 463 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 LUC7LQ9NQ29 371 aaKnown RBP3.95□□□□□ -1.78
SORT1-202ENST00000466471 KCNK4Q9NYG8 393 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 CALCOCO1Q9P1Z2 691 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 TJP2Q9UDY2 1190 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 TRHDEQ9UKU6 1024 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 DIS3Q9Y2L1 958 aaKnown RBP3.95□□□□□ -1.78
SORT1-202ENST00000466471 HIF3AQ9Y2N7 669 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 ELP1O95163 1332 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 ADGRA2Q96PE1 1338 aa3.95□□□□□ -1.78
SORT1-202ENST00000466471 ANKRD17O75179 2603 aaKnown RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 SPEGQ15772 3267 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 PRAMEF22A3QJZ6 481 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 PRAMEF27A3QJZ7 478 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 YDJCA8MPS7 323 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 GOLGA6L6A8MZA4 724 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 KIF2AO00139 706 aaPredicted RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 GABRDO14764 452 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 FSCN2O14926 492 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 DHX15O43143 795 aaKnown RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 ADAMTS4O75173 837 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 RAD17O75943 681 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 ADCY5O95622 1261 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 JMJD7P0C870 316 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 H2AFXP16104 143 aaPredicted RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 CD247P20963 164 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 RPS12P25398 132 aaKnown RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 CYP2C19P33261 490 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 GFRA1P56159 465 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 GNAI1P63096 354 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 ID3Q02535 119 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 POU5F1BQ06416 359 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 TCIRG1Q13488 830 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 RAPGEF1Q13905 1077 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 KRT72Q14CN4 511 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 LRRC41Q15345 812 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 TESK1Q15569 626 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 SEPT7Q16181 437 aaKnown RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 SYCP2LQ5T4T6 812 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 ZCCHC8Q6NZY4 707 aaKnown RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 CASC1Q6TDU7 716 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 ACAD11Q709F0 780 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 C14orf80Q86SX3 495 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 DDX53Q86TM3 631 aaKnown RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 PLA2G4DQ86XP0 818 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 CCDC144CPQ8IYA2 1237 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 KRT222Q8N1A0 295 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 ARMC10Q8N2F6 343 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 ZGPATQ8N5A5 531 aaKnown RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 IQUBQ8NA54 791 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 KIF18AQ8NI77 898 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 PI4K2BQ8TCG2 481 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 DIS3LQ8TF46 1054 aaKnown RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 PAWRQ96IZ0 340 aaKnown RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 TIGD1Q96MW7 591 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 AIFM3Q96NN9 605 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 SARGQ9BW04 601 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 SLC12A5Q9H2X9 1139 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 KCNF1Q9H3M0 494 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 ATXN3LQ9H3M9 355 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 FBRSQ9HAH7 460 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.94□□□□□ -1.78
SORT1-202ENST00000466471 SH2B1Q9NRF2 756 aaPredicted RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 PSD3Q9NYI0 1048 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 NDOR1Q9UHB4 597 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 ZHX1Q9UKY1 873 aaPredicted RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 ANKRD6Q9Y2G4 727 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 ZSCAN21Q9Y5A6 473 aaPredicted RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 ATP6V1DQ9Y5K8 247 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 TNPO3Q9Y5L0 923 aaKnown RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 TEP1Q99973 2627 aaKnown RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 EP300Q09472 2414 aaPredicted RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 ASTN2O75129 1339 aaPredicted RBP3.94□□□□□ -1.78
SORT1-202ENST00000466471 PTPRCP08575 1304 aa3.94□□□□□ -1.78
SORT1-202ENST00000466471 SMG1Q96Q15 3661 aaKnown RBP3.93□□□□□ -1.78
SORT1-202ENST00000466471 FRYQ5TBA9 3013 aa3.93□□□□□ -1.78
SORT1-202ENST00000466471 A0A0G2JMZ2 1700 aa3.93□□□□□ -1.78
SORT1-202ENST00000466471 KMT2EQ8IZD2 1858 aa3.93□□□□□ -1.78
SORT1-202ENST00000466471 TCRBV16S1A1N1A0A5B0 115 aa3.93□□□□□ -1.78
SORT1-202ENST00000466471 MED19A0JLT2 244 aaPredicted RBP3.93□□□□□ -1.78
SORT1-202ENST00000466471 HMX2A2RU54 273 aa3.93□□□□□ -1.78
SORT1-202ENST00000466471 KIAA1324LA8MWY0 1029 aaPredicted RBP3.93□□□□□ -1.78
SORT1-202ENST00000466471 DCDC2CA8MYV0 355 aa3.93□□□□□ -1.78
SORT1-202ENST00000466471 GSC2O15499 205 aa3.93□□□□□ -1.78
SORT1-202ENST00000466471 DDX3YO15523 660 aaKnown RBP3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms