RNA–Protein interactions for RNA: ENST00000466438.1

HMGXB4-206, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-206ENST00000466438 ADH1AP07327 375 aa16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 RETP07949 1114 aa16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 SLC11A1P49279 550 aa16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 NLRP11P59045 1033 aaKnown RBP16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 TROAPQ12815 778 aa16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 SLC44A4Q53GD3 710 aa16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 ZBTB41Q5SVQ8 909 aa16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 N4BP2L1Q5TBK1 243 aaPredicted RBP16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 PRR23CQ6ZRP0 262 aa16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 ZNF710Q8N1W2 664 aa16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 CLDN23Q96B33 292 aa16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 MXRA8Q9BRK3 442 aa16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 ADAMTS10Q9H324 1103 aa16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 PSTPIP2Q9H939 334 aa16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 SEMA4GQ9NTN9 838 aa16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 DNAJB4Q9UDY4 337 aa16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 ZFP37Q9Y6Q3 630 aaPredicted RBP16.71■□□□□ 0.27
HMGXB4-206ENST00000466438 CNOT1A5YKK6 2376 aaKnown RBP16.71■□□□□ 0.26
HMGXB4-206ENST00000466438 SPDYE3A6NKU9 549 aa16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 GLUD1P00367 558 aa16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 RPS9P46781 194 aaKnown RBP16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 CLCN3P51790 818 aa16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 NUCB1Q02818 461 aa16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 RNASELQ05823 741 aaKnown RBP16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 ITGB3BPQ13352 177 aaPredicted RBP16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 LPAL2Q16609 132 aa16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 NOMO2Q5JPE7 1267 aa16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 PDXDC2PQ6P474 469 aa16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 GLB1LQ6UWU2 654 aa16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 ABHD15Q6UXT9 468 aa16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 CYB5R4Q7L1T6 521 aa16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 CCDC60Q8IWA6 550 aaPredicted RBP16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 CELF5Q8N6W0 485 aaKnown RBP16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 ST13P5Q8NFI4 369 aaPredicted RBP16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 PHKBQ93100 1093 aa16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 RRP36Q96EU6 259 aaKnown RBP16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 MAP7D2Q96T17 732 aa16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 RPP25Q9BUL9 199 aaKnown RBP16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 PIDD1Q9HB75 910 aa16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 AKT3Q9Y243 479 aa16.7■□□□□ 0.26
HMGXB4-206ENST00000466438 SOBPA7XYQ1 873 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 NCAM2O15394 837 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 FOXD2O60548 495 aaPredicted RBP16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 URODP06132 367 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 PDE1AP54750 535 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 PFKPQ01813 784 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 CSRP2Q16527 193 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 HDAC7Q8WUI4 952 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 FGF14Q92915 247 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 RPS6KC1Q96S38 1066 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 MYL10Q9BUA6 226 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 SPZ1Q9BXG8 430 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 ZNF302Q9NR11 478 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 SEC63Q9UGP8 760 aaKnown RBP16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 ZMIZ1Q9ULJ6 1067 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 PCDHA6Q9UN73 950 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 SSX2IPQ9Y2D8 614 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 PCDHA8Q9Y5H6 950 aa16.69■□□□□ 0.26
HMGXB4-206ENST00000466438 C2CD2LO14523 706 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 TEX28O15482 410 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 GDF9O60383 454 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 CCNE2O96020 404 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 DARSP14868 501 aaKnown RBP16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 ATP4AP20648 1035 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 TARSP26639 723 aaKnown RBP16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 PHKA2P46019 1235 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 AK2P54819 239 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 NRLP54845 237 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 UBE2SQ16763 222 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 ANKRD45Q5TZF3 282 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 IL31Q6EBC2 164 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 PARM1Q6UWI2 310 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 CHD1LQ86WJ1 897 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 NELL2Q99435 816 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 DSCC1Q9BVC3 393 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 TRAIPQ9BWF2 469 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 NT5C3AQ9H0P0 336 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 GBP3Q9H0R5 595 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 AGO4Q9HCK5 861 aaKnown RBP16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 ZDHHC7Q9NXF8 308 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 INPP5FQ9Y2H2 1132 aa16.68■□□□□ 0.26
HMGXB4-206ENST00000466438 MAGEB2O15479 319 aa16.67■□□□□ 0.26
HMGXB4-206ENST00000466438 B4GALT3O60512 393 aa16.67■□□□□ 0.26
HMGXB4-206ENST00000466438 SOD2P04179 222 aa16.67■□□□□ 0.26
HMGXB4-206ENST00000466438 MYBP10242 640 aa16.67■□□□□ 0.26
HMGXB4-206ENST00000466438 SKIP12755 728 aa16.67■□□□□ 0.26
HMGXB4-206ENST00000466438 CD72P21854 359 aa16.67■□□□□ 0.26
HMGXB4-206ENST00000466438 FGFR4P22455 802 aa16.67■□□□□ 0.26
HMGXB4-206ENST00000466438 TMOD1P28289 359 aa16.67■□□□□ 0.26
HMGXB4-206ENST00000466438 KIF5BP33176 963 aa16.67■□□□□ 0.26
HMGXB4-206ENST00000466438 CKAP2LQ8IYA6 745 aa16.67■□□□□ 0.26
HMGXB4-206ENST00000466438 LINC01465Q8N7H1 131 aa16.67■□□□□ 0.26
HMGXB4-206ENST00000466438 LPPQ93052 612 aa16.67■□□□□ 0.26
HMGXB4-206ENST00000466438 PLEKHA4Q9H4M7 779 aa16.67■□□□□ 0.26
HMGXB4-206ENST00000466438 CHST12Q9NRB3 414 aa16.67■□□□□ 0.26
HMGXB4-206ENST00000466438 CEP131Q9UPN4 1083 aa16.67■□□□□ 0.26
HMGXB4-206ENST00000466438 OFD1O75665 1012 aa16.66■□□□□ 0.26
HMGXB4-206ENST00000466438 TDGF1P13385 188 aa16.66■□□□□ 0.26
HMGXB4-206ENST00000466438 SDSP20132 328 aa16.66■□□□□ 0.26
HMGXB4-206ENST00000466438 GPC3P51654 580 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms