RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 USP20Q9Y2K6 914 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 PCNTO95613 3336 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 ATP9AO75110 1047 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 YWHABP31946 246 aaKnown RBP17.72■□□□□ 0.43
SLX4-202ENST00000466154 FLT3P36888 993 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 RPS6P62753 249 aaKnown RBP17.72■□□□□ 0.43
SLX4-202ENST00000466154 MESDQ14696 234 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 TKFCQ3LXA3 575 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 NT5DC3Q86UY8 548 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 CAVIN3Q969G5 261 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 NEUROG2Q9H2A3 272 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 ODF2LQ9ULJ1 636 aa17.72■□□□□ 0.43
SLX4-202ENST00000466154 BACH1O14867 736 aa17.71■□□□□ 0.43
SLX4-202ENST00000466154 FTLP02792 175 aaPredicted RBP17.71■□□□□ 0.43
SLX4-202ENST00000466154 DLATP10515 647 aaKnown RBP17.71■□□□□ 0.43
SLX4-202ENST00000466154 HMGB2P26583 209 aaKnown RBP17.71■□□□□ 0.43
SLX4-202ENST00000466154 CTNNA1P35221 906 aaKnown RBP17.71■□□□□ 0.43
SLX4-202ENST00000466154 MAPK7Q13164 816 aa17.71■□□□□ 0.43
SLX4-202ENST00000466154 HAUS6Q7Z4H7 955 aa17.71■□□□□ 0.43
SLX4-202ENST00000466154 RPUSD2Q8IZ73 545 aaKnown RBP17.71■□□□□ 0.43
SLX4-202ENST00000466154 SYCE1Q8N0S2 351 aa17.71■□□□□ 0.43
SLX4-202ENST00000466154 BTBD6Q96KE9 485 aa17.71■□□□□ 0.43
SLX4-202ENST00000466154 SEL1LQ9UBV2 794 aa17.71■□□□□ 0.43
SLX4-202ENST00000466154 SMIM23A6NLE4 172 aa17.71■□□□□ 0.43
SLX4-202ENST00000466154 MTMR2Q13614 643 aa17.71■□□□□ 0.43
SLX4-202ENST00000466154 PRPF38AQ8NAV1 312 aaKnown RBP17.71■□□□□ 0.43
SLX4-202ENST00000466154 RMDN3Q96TC7 470 aa17.71■□□□□ 0.43
SLX4-202ENST00000466154 HSPBP1Q9NZL4 362 aa17.71■□□□□ 0.43
SLX4-202ENST00000466154 ICAM1P05362 532 aa17.7■□□□□ 0.42
SLX4-202ENST00000466154 BCRP11274 1271 aa17.7■□□□□ 0.42
SLX4-202ENST00000466154 QARSP47897 775 aaKnown RBP17.7■□□□□ 0.42
SLX4-202ENST00000466154 RARRES1P49788 294 aa17.7■□□□□ 0.42
SLX4-202ENST00000466154 SF3A3Q12874 501 aaKnown RBP eCLIP17.7■□□□□ 0.42
SLX4-202ENST00000466154 GLG1Q92896 1179 aa17.7■□□□□ 0.42
SLX4-202ENST00000466154 MRPS9P82933 396 aaKnown RBP17.7■□□□□ 0.42
SLX4-202ENST00000466154 SPP2Q13103 211 aa17.7■□□□□ 0.42
SLX4-202ENST00000466154 ARHGEF16Q5VV41 709 aa17.7■□□□□ 0.42
SLX4-202ENST00000466154 UHMK1Q8TAS1 419 aaKnown RBP17.7■□□□□ 0.42
SLX4-202ENST00000466154 RFFLQ8WZ73 363 aa17.7■□□□□ 0.42
SLX4-202ENST00000466154 TOPORSQ9NS56 1045 aaPredicted RBP17.7■□□□□ 0.42
SLX4-202ENST00000466154 CXCL9Q07325 125 aa17.7■□□□□ 0.42
SLX4-202ENST00000466154 CBWD2Q8IUF1 395 aa17.7■□□□□ 0.42
SLX4-202ENST00000466154 ACCSQ96QU6 501 aa17.7■□□□□ 0.42
SLX4-202ENST00000466154 ASTN2O75129 1339 aaPredicted RBP17.69■□□□□ 0.42
SLX4-202ENST00000466154 GTPBP10A4D1E9 387 aaKnown RBP17.69■□□□□ 0.42
SLX4-202ENST00000466154 CYP26A1O43174 497 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 PPFIA4O75335 1185 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 CCDC172P0C7W6 258 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 ZNF131P52739 623 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 PRKG1Q13976 671 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 AGPAT1Q99943 283 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 GPR88Q9GZN0 384 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 GJA3Q9Y6H8 435 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 ZNF536O15090 1300 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 NDUFAB1O14561 156 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 SGPL1O95470 568 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 MXI1P50539 228 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 XXYLT1Q8NBI6 393 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 WNK4Q96J92 1243 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 RNPC3Q96LT9 517 aaKnown RBP17.69■□□□□ 0.42
SLX4-202ENST00000466154 MKNK1Q9BUB5 465 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 FBXL5Q9UKA1 691 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 COG5Q9UP83 839 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 ATP8A1Q9Y2Q0 1164 aa17.69■□□□□ 0.42
SLX4-202ENST00000466154 UTP11Q9Y3A2 253 aaKnown RBP17.69■□□□□ 0.42
SLX4-202ENST00000466154 GUCY2CP25092 1073 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 EPC2Q52LR7 807 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 LMBRD2Q68DH5 695 aaPredicted RBP17.68■□□□□ 0.42
SLX4-202ENST00000466154 RTKN2Q8IZC4 609 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 CCDC26Q8TAB7 109 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 ACTRT1Q8TDG2 376 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 BICD1Q96G01 975 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 RIT2Q99578 217 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 AGO4Q9HCK5 861 aaKnown RBP17.68■□□□□ 0.42
SLX4-202ENST00000466154 RXRBP28702 533 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 HSD17B3P37058 310 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 MARCKSL1P49006 195 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 SAMD7Q7Z3H4 446 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 CPNE8Q86YQ8 564 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 SYTL5Q8TDW5 730 aaPredicted RBP17.68■□□□□ 0.42
SLX4-202ENST00000466154 WHAMMQ8TF30 809 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 SCFD2Q8WU76 684 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 FEZ2Q9UHY8 353 aaPredicted RBP17.68■□□□□ 0.42
SLX4-202ENST00000466154 IFFO1Q0D2I5 559 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 INTS8Q75QN2 995 aaKnown RBP17.68■□□□□ 0.42
SLX4-202ENST00000466154 SLC30A5Q8TAD4 765 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 PIK3R5Q8WYR1 880 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 ISCUQ9H1K1 167 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 PPANQ9NQ55 473 aaKnown RBP17.68■□□□□ 0.42
SLX4-202ENST00000466154 DMAC2Q9NW81 257 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 SUCLA2Q9P2R7 463 aaPredicted RBP17.68■□□□□ 0.42
SLX4-202ENST00000466154 PTPN22Q9Y2R2 807 aa17.68■□□□□ 0.42
SLX4-202ENST00000466154 KRT5P13647 590 aa17.67■□□□□ 0.42
SLX4-202ENST00000466154 PLS3P13797 630 aa17.67■□□□□ 0.42
SLX4-202ENST00000466154 NR1D1P20393 614 aa17.67■□□□□ 0.42
SLX4-202ENST00000466154 SSTR3P32745 418 aaPredicted RBP17.67■□□□□ 0.42
SLX4-202ENST00000466154 DHX9Q08211 1270 aaKnown RBP17.67■□□□□ 0.42
SLX4-202ENST00000466154 PPP2R5AQ15172 486 aa17.67■□□□□ 0.42
SLX4-202ENST00000466154 IQCKQ8N0W5 287 aa17.67■□□□□ 0.42
SLX4-202ENST00000466154 CLEC4DQ8WXI8 215 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms