RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 V9GY48 417 aaPredicted RBP9.65□□□□□ -0.86
DDR1-242ENST00000465966 ZDBF2Q9HCK1 2354 aa9.65□□□□□ -0.87
DDR1-242ENST00000465966 BAZ2BQ9UIF8 2168 aaKnown RBP9.64□□□□□ -0.87
DDR1-242ENST00000465966 A0A0U1RQF3 1178 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 GOLGA6L22H0YM25 854 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 STK25O00506 426 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 C22orf31O95567 290 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 CCNE2O96020 404 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 NCLP19338 710 aaKnown RBP9.64□□□□□ -0.87
DDR1-242ENST00000465966 RFX1P22670 979 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 EIF4BP23588 611 aaKnown RBP9.64□□□□□ -0.87
DDR1-242ENST00000465966 ADCY7P51828 1080 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 BCAR1P56945 870 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 NLRP11P59045 1033 aaKnown RBP9.64□□□□□ -0.87
DDR1-242ENST00000465966 TDGQ13569 410 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 TRIM29Q14134 588 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 ANGPT1Q15389 498 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 PFKFB3Q16875 520 aaPredicted RBP9.64□□□□□ -0.87
DDR1-242ENST00000465966 PPP1R18Q6NYC8 613 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 NIPA1Q7RTP0 329 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 TRMT1LQ7Z2T5 733 aaKnown RBP9.64□□□□□ -0.87
DDR1-242ENST00000465966 CCDC60Q8IWA6 550 aaPredicted RBP9.64□□□□□ -0.87
DDR1-242ENST00000465966 CCDC105Q8IYK2 499 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 C12orf76Q8N812 135 aaPredicted RBP9.64□□□□□ -0.87
DDR1-242ENST00000465966 DTWD2Q8NBA8 298 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 ANO3Q9BYT9 981 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 RIC8AQ9NPQ8 531 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 STK39Q9UEW8 545 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 USP34Q70CQ2 3546 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 KMT2EQ8IZD2 1858 aa9.64□□□□□ -0.87
DDR1-242ENST00000465966 C5orf42Q9H799 3197 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 ZBTB42B2RXF5 422 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 hCG_1984214I3L0E3 225 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 IPO5O00410 1097 aaKnown RBP9.63□□□□□ -0.87
DDR1-242ENST00000465966 LMNAP02545 664 aaKnown RBP9.63□□□□□ -0.87
DDR1-242ENST00000465966 PSAPP07602 524 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 PTMSP20962 102 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 SREBF1P36956 1147 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 POLGP54098 1239 aaPredicted RBP9.63□□□□□ -0.87
DDR1-242ENST00000465966 KRT85P78386 507 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 AP3B2Q13367 1082 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 NONOQ15233 471 aaKnown RBP eCLIP9.63□□□□□ -0.87
DDR1-242ENST00000465966 NPY5RQ15761 445 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 CWF19L1Q69YN2 538 aaKnown RBP9.63□□□□□ -0.87
DDR1-242ENST00000465966 WWC2Q6AWC2 1192 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 TYW1BQ6NUM6 668 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 EFCAB12Q6NXP0 572 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 TMC5Q6UXY8 1006 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 CCDC149Q6ZUS6 474 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 DGLUCYQ7Z3D6 616 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 BRAPQ7Z569 592 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 PLA2G4DQ86XP0 818 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 SMAP1Q8IYB5 467 aaPredicted RBP9.63□□□□□ -0.87
DDR1-242ENST00000465966 DIS3L2Q8IYB7 885 aaKnown RBP9.63□□□□□ -0.87
DDR1-242ENST00000465966 SIX5Q8N196 739 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 ZNF713Q8N859 430 aaPredicted RBP9.63□□□□□ -0.87
DDR1-242ENST00000465966 HELQQ8TDG4 1101 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 OXER1Q8TDS5 423 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 PGBD1Q96JS3 809 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 FAM167AQ96KS9 214 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 ZNF577Q9BSK1 485 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 PHF20Q9BVI0 1012 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 EMILIN2Q9BXX0 1053 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 SFXN1Q9H9B4 322 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 NRBP2Q9NSY0 501 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 TBC1D22BQ9NU19 505 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 RNF19AQ9NV58 838 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 DUSP12Q9UNI6 340 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 MAFBQ9Y5Q3 323 aaPredicted RBP9.63□□□□□ -0.87
DDR1-242ENST00000465966 IRAK3Q9Y616 596 aa9.63□□□□□ -0.87
DDR1-242ENST00000465966 ATG2AQ2TAZ0 1938 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 SMCO2A6NFE2 343 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 NT5C1B-RDH14C9J2C7 533 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 ADAMTS3O15072 1205 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 PI15O43692 258 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 TRAK2O60296 914 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 ZC3H11AO75152 810 aaKnown RBP eCLIP9.62□□□□□ -0.87
DDR1-242ENST00000465966 GADD45BO75293 160 aaPredicted RBP9.62□□□□□ -0.87
DDR1-242ENST00000465966 PRPF40AO75400 957 aaKnown RBP9.62□□□□□ -0.87
DDR1-242ENST00000465966 CTSAP10619 480 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 SKIP12755 728 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 EPCAMP16422 314 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 ATP4AP20648 1035 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 U2AF2P26368 475 aaKnown RBP eCLIP9.62□□□□□ -0.87
DDR1-242ENST00000465966 CLCN3P51790 818 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 CDC42EP1Q00587 391 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 NR5A1Q13285 461 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 CLLU1OSQ5K130 101 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 ZNF746Q6NUN9 644 aaPredicted RBP9.62□□□□□ -0.87
DDR1-242ENST00000465966 ELMSAN1Q6PJG2 1045 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 ZC3H14Q6PJT7 736 aaKnown RBP9.62□□□□□ -0.87
DDR1-242ENST00000465966 GPR149Q86SP6 731 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 DDX53Q86TM3 631 aaKnown RBP9.62□□□□□ -0.87
DDR1-242ENST00000465966 LEO1Q8WVC0 666 aaPredicted RBP9.62□□□□□ -0.87
DDR1-242ENST00000465966 TNFRSF25Q93038 417 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 USP28Q96RU2 1077 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 HINFPQ9BQA5 517 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 ZBP1Q9H171 429 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 ADAMTS10Q9H324 1103 aa9.62□□□□□ -0.87
DDR1-242ENST00000465966 KCNK12Q9HB15 430 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 175.6 ms