RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 CMTR2Q8IYT2 770 aaKnown RBP28.71■■■□□ 2.19
SMC4-206ENST00000465903 FIBCD1Q8N539 461 aa28.71■■■□□ 2.19
SMC4-206ENST00000465903 LINC00301Q8NCQ3 95 aa28.71■■■□□ 2.19
SMC4-206ENST00000465903 CDK5RAP3Q96JB5 506 aa28.71■■■□□ 2.19
SMC4-206ENST00000465903 COL6A3P12111 3177 aa28.7■■■□□ 2.19
SMC4-206ENST00000465903 PRRC2BQ5JSZ5 2229 aaKnown RBP28.7■■■□□ 2.19
SMC4-206ENST00000465903 FOSL2P15408 326 aa28.7■■■□□ 2.18
SMC4-206ENST00000465903 ATF7P17544 494 aaPredicted RBP28.7■■■□□ 2.18
SMC4-206ENST00000465903 SLC12A3P55017 1021 aa28.7■■■□□ 2.18
SMC4-206ENST00000465903 BTG3Q14201 252 aaPredicted RBP28.7■■■□□ 2.18
SMC4-206ENST00000465903 KARSQ15046 597 aaKnown RBP28.7■■■□□ 2.18
SMC4-206ENST00000465903 AMHR2Q16671 573 aa28.7■■■□□ 2.18
SMC4-206ENST00000465903 ZNF598Q86UK7 904 aaKnown RBP28.7■■■□□ 2.18
SMC4-206ENST00000465903 CALML4Q96GE6 196 aa28.7■■■□□ 2.18
SMC4-206ENST00000465903 ZNF396Q96N95 335 aaPredicted RBP28.7■■■□□ 2.18
SMC4-206ENST00000465903 BLOC1S4Q9NUP1 217 aa28.7■■■□□ 2.18
SMC4-206ENST00000465903 RNF216Q9NWF9 866 aaPredicted RBP28.7■■■□□ 2.18
SMC4-206ENST00000465903 MTUS1Q9ULD2 1270 aa28.7■■■□□ 2.18
SMC4-206ENST00000465903 ZDHHC9Q9Y397 364 aa28.7■■■□□ 2.18
SMC4-206ENST00000465903 TCHHQ07283 1943 aa28.7■■■□□ 2.18
SMC4-206ENST00000465903 LRRIQ4A6NIV6 560 aa28.69■■■□□ 2.18
SMC4-206ENST00000465903 LPXNO60711 386 aa28.69■■■□□ 2.18
SMC4-206ENST00000465903 PLA2G4BP0C869 781 aa28.69■■■□□ 2.18
SMC4-206ENST00000465903 CDCA2Q69YH5 1023 aaPredicted RBP28.69■■■□□ 2.18
SMC4-206ENST00000465903 TWF2Q6IBS0 349 aaKnown RBP28.69■■■□□ 2.18
SMC4-206ENST00000465903 DAW1Q8N136 415 aa28.69■■■□□ 2.18
SMC4-206ENST00000465903 KIFAP3Q92845 792 aa28.69■■■□□ 2.18
SMC4-206ENST00000465903 GAS2L1Q99501 681 aaPredicted RBP28.69■■■□□ 2.18
SMC4-206ENST00000465903 INO80B-WBP1J3KQ70 363 aa28.68■■■□□ 2.18
SMC4-206ENST00000465903 TSPAN1O60635 241 aa28.68■■■□□ 2.18
SMC4-206ENST00000465903 BRD1O95696 1058 aa28.68■■■□□ 2.18
SMC4-206ENST00000465903 FGFR1P11362 822 aa28.68■■■□□ 2.18
SMC4-206ENST00000465903 MAPK7Q13164 816 aa28.68■■■□□ 2.18
SMC4-206ENST00000465903 STK38Q15208 465 aa28.68■■■□□ 2.18
SMC4-206ENST00000465903 PCBP1Q15365 356 aaKnown RBP eCLIP28.68■■■□□ 2.186e-13■■□□□ 12.1
SMC4-206ENST00000465903 FOXD4L6Q3SYB3 417 aaPredicted RBP28.68■■■□□ 2.18
SMC4-206ENST00000465903 PAN2Q504Q3 1202 aaKnown RBP28.68■■■□□ 2.18
SMC4-206ENST00000465903 UBXN11Q5T124 520 aa28.68■■■□□ 2.18
SMC4-206ENST00000465903 FOXD4L3Q6VB84 417 aaPredicted RBP28.68■■■□□ 2.18
SMC4-206ENST00000465903 TMEM192Q8IY95 271 aa28.68■■■□□ 2.18
SMC4-206ENST00000465903 CLP1Q92989 425 aaKnown RBP28.68■■■□□ 2.18
SMC4-206ENST00000465903 EOMESO95936 686 aa28.67■■■□□ 2.18
SMC4-206ENST00000465903 PLCG1P19174 1290 aa28.67■■■□□ 2.18
SMC4-206ENST00000465903 NAMPTP43490 491 aa28.67■■■□□ 2.18
SMC4-206ENST00000465903 BECN1Q14457 450 aa28.67■■■□□ 2.18
SMC4-206ENST00000465903 EPC2Q52LR7 807 aa28.67■■■□□ 2.18
SMC4-206ENST00000465903 KRI1Q8N9T8 703 aaKnown RBP28.67■■■□□ 2.18
SMC4-206ENST00000465903 SYMPKQ92797 1274 aaKnown RBP28.67■■■□□ 2.18
SMC4-206ENST00000465903 SAMD11Q96NU1 681 aa28.67■■■□□ 2.18
SMC4-206ENST00000465903 FAM105AQ9NUU6 356 aa28.67■■■□□ 2.18
SMC4-206ENST00000465903 MRPL42Q9Y6G3 142 aaKnown RBP28.67■■■□□ 2.18
SMC4-206ENST00000465903 ZNF623O75123 536 aa28.66■■■□□ 2.18
SMC4-206ENST00000465903 HIP1RO75146 1068 aa28.66■■■□□ 2.18
SMC4-206ENST00000465903 SSBP05455 408 aaKnown RBP eCLIP28.66■■■□□ 2.18
SMC4-206ENST00000465903 POU3F3P20264 500 aaPredicted RBP28.66■■■□□ 2.18
SMC4-206ENST00000465903 GUCY2CP25092 1073 aa28.66■■■□□ 2.18
SMC4-206ENST00000465903 CASD1Q96PB1 797 aa28.66■■■□□ 2.18
SMC4-206ENST00000465903 FZD8Q9H461 694 aa28.66■■■□□ 2.18
SMC4-206ENST00000465903 TBKBP1A7MCY6 615 aa28.65■■■□□ 2.18
SMC4-206ENST00000465903 SPTLC2O15270 562 aa28.65■■■□□ 2.18
SMC4-206ENST00000465903 PPP6R2O75170 966 aa28.65■■■□□ 2.18
SMC4-206ENST00000465903 ERLIN2O94905 339 aa28.65■■■□□ 2.18
SMC4-206ENST00000465903 YEATS4O95619 227 aa28.65■■■□□ 2.18
SMC4-206ENST00000465903 ARF4P18085 180 aaPredicted RBP28.65■■■□□ 2.18
SMC4-206ENST00000465903 AXLP30530 894 aa28.65■■■□□ 2.18
SMC4-206ENST00000465903 PPP2R5AQ15172 486 aa28.65■■■□□ 2.18
SMC4-206ENST00000465903 ARSHQ5FYA8 562 aa28.65■■■□□ 2.18
SMC4-206ENST00000465903 CLLU1OSQ5K130 101 aa28.65■■■□□ 2.18
SMC4-206ENST00000465903 FBXO22Q8NEZ5 403 aa28.65■■■□□ 2.18
SMC4-206ENST00000465903 CPB2Q96IY4 423 aa28.65■■■□□ 2.18
SMC4-206ENST00000465903 DAXXQ9UER7 740 aaPredicted RBP28.65■■■□□ 2.18
SMC4-206ENST00000465903 B4GALT5O43286 388 aa28.64■■■□□ 2.18
SMC4-206ENST00000465903 IGFBP4P22692 258 aa28.64■■■□□ 2.18
SMC4-206ENST00000465903 FAM187BQ17R55 369 aa28.64■■■□□ 2.18
SMC4-206ENST00000465903 PPP4R3CPQ6ZMV5 832 aa28.64■■■□□ 2.18
SMC4-206ENST00000465903 ZBTB8OSQ8IWT0 167 aa28.64■■■□□ 2.18
SMC4-206ENST00000465903 GDPD5Q8WTR4 605 aa28.64■■■□□ 2.18
SMC4-206ENST00000465903 RAD54LQ92698 747 aa28.64■■■□□ 2.18
SMC4-206ENST00000465903 LPPQ93052 612 aa28.64■■■□□ 2.18
SMC4-206ENST00000465903 IFT74Q96LB3 600 aa28.64■■■□□ 2.18
SMC4-206ENST00000465903 KIFC3Q9BVG8 833 aa28.64■■■□□ 2.18
SMC4-206ENST00000465903 TMEM117Q9H0C3 514 aa28.64■■■□□ 2.18
SMC4-206ENST00000465903 CCDC113Q9H0I3 377 aa28.64■■■□□ 2.18
SMC4-206ENST00000465903 MYO7AQ13402 2215 aa28.63■■■□□ 2.17
SMC4-206ENST00000465903 ATG2AQ2TAZ0 1938 aa28.63■■■□□ 2.17
SMC4-206ENST00000465903 MEIS3P2A8K0S8 358 aa28.63■■■□□ 2.17
SMC4-206ENST00000465903 SFI1A8K8P3 1242 aa28.63■■■□□ 2.17
SMC4-206ENST00000465903 EDN1P05305 212 aa28.63■■■□□ 2.17
SMC4-206ENST00000465903 BMPR1AP36894 532 aa28.63■■■□□ 2.17
SMC4-206ENST00000465903 MCM6Q14566 821 aa28.63■■■□□ 2.17
SMC4-206ENST00000465903 MRPL10Q7Z7H8 261 aaKnown RBP28.63■■■□□ 2.17
SMC4-206ENST00000465903 RNF169Q8NCN4 708 aa28.63■■■□□ 2.17
SMC4-206ENST00000465903 DEPTORQ8TB45 409 aa28.63■■■□□ 2.17
SMC4-206ENST00000465903 TIPINQ9BVW5 301 aa28.63■■■□□ 2.17
SMC4-206ENST00000465903 C2orf40Q9H1Z8 148 aa28.63■■■□□ 2.17
SMC4-206ENST00000465903 PRMT7Q9NVM4 692 aaPredicted RBP28.63■■■□□ 2.17
SMC4-206ENST00000465903 KCND2Q9NZV8 630 aa28.63■■■□□ 2.17
SMC4-206ENST00000465903 HCSTQ9UBK5 93 aa28.63■■■□□ 2.17
SMC4-206ENST00000465903 PCDHB2Q9Y5E7 798 aa28.63■■■□□ 2.17
SMC4-206ENST00000465903 MTCH2Q9Y6C9 303 aa28.63■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms