RNA–Protein interactions for RNA: ENST00000465756.5

NPHP3-203, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 3,852 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-203ENST00000465756 ARNTL2Q8WYA1 636 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 SRPRBQ9Y5M8 271 aaKnown RBP11.89□□□□□ -0.51
NPHP3-203ENST00000465756 CA3P07451 260 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 ERVK-21P61565 698 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 PRPF4BQ13523 1007 aaKnown RBP11.89□□□□□ -0.51
NPHP3-203ENST00000465756 POTEGQ6S5H5 508 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 THNSL1Q8IYQ7 743 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 MTMR6Q9Y217 621 aa11.89□□□□□ -0.51
NPHP3-203ENST00000465756 PRKCBP05771 671 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 LIG1P18858 919 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 RESTQ13127 1097 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 GPM6BQ13491 265 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 GIT2Q14161 759 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 SLC39A14Q15043 492 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 FAM228AQ86W67 206 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 GPBP1Q86WP2 473 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 IFNLR1Q8IU57 520 aaPredicted RBP11.88□□□□□ -0.51
NPHP3-203ENST00000465756 HVCN1Q96D96 273 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 TMEM169Q96HH4 297 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 PLA2G4BP0C869 781 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 SPIRE1Q08AE8 756 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 POSTNQ15063 836 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 C16orf59Q7L2K0 433 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 SYMPKQ92797 1274 aaKnown RBP11.88□□□□□ -0.51
NPHP3-203ENST00000465756 MTMR10Q9NXD2 777 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 CXXC1Q9P0U4 656 aaPredicted RBP11.88□□□□□ -0.51
NPHP3-203ENST00000465756 CIZ1Q9ULV3 898 aaPredicted RBP11.88□□□□□ -0.51
NPHP3-203ENST00000465756 GUCY2CP25092 1073 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 ALDH7A1P49419 539 aaKnown RBP11.88□□□□□ -0.51
NPHP3-203ENST00000465756 P2RX5Q93086 422 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 LRCH3Q96II8 777 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 COG5Q9UP83 839 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 CEP290O15078 2479 aa11.88□□□□□ -0.51
NPHP3-203ENST00000465756 MED24O75448 989 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 ZNF579Q8NAF0 562 aaKnown RBP11.87□□□□□ -0.51
NPHP3-203ENST00000465756 LARP4BQ92615 738 aaKnown RBP11.87□□□□□ -0.51
NPHP3-203ENST00000465756 GJA10Q969M2 543 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 COLEC11Q9BWP8 271 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 CSRNP2Q9H175 543 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 TRIOBPQ9H2D6 2365 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 CREMQ03060 361 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 CEBPZQ03701 1054 aaKnown RBP11.87□□□□□ -0.51
NPHP3-203ENST00000465756 PUS10Q3MIT2 529 aaKnown RBP11.87□□□□□ -0.51
NPHP3-203ENST00000465756 HYIQ5T013 277 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 ECHDC2Q86YB7 292 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 TMEM192Q8IY95 271 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 MICAL1Q8TDZ2 1067 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 ADAMTS10Q9H324 1103 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 A0A0U1RQF3 1178 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 GPR32O75388 356 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 ARL2P36404 184 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 HTRA4P83105 476 aaPredicted RBP11.87□□□□□ -0.51
NPHP3-203ENST00000465756 SLFN12LQ6IEE8 588 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 SLC27A1Q6PCB7 646 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 PPP4R3CPQ6ZMV5 832 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 MAEAQ7L5Y9 396 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 LINC01465Q8N7H1 131 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 SPIRE2Q8WWL2 714 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 SPATA32Q96LK8 384 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 IPO9Q96P70 1041 aaKnown RBP11.87□□□□□ -0.51
NPHP3-203ENST00000465756 TMEM134Q9H6X4 195 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 AGPAT5Q9NUQ2 364 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 GIT1Q9Y2X7 761 aa11.87□□□□□ -0.51
NPHP3-203ENST00000465756 ZNF623O75123 536 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 DEFB103AP81534 67 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 ELAVL2Q12926 359 aaKnown RBP11.86□□□□□ -0.51
NPHP3-203ENST00000465756 KANK3Q6NY19 840 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 TRAF7Q6Q0C0 670 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 SYT2Q8N9I0 419 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-203ENST00000465756 MAFAQ8NHW3 353 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-203ENST00000465756 WNT8BQ93098 351 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 TSPAN18Q96SJ8 248 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 TRAIPQ9BWF2 469 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 DNAI2Q9GZS0 605 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 RSAD1Q9HA92 442 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 PARVGQ9HBI0 331 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 FAM105AQ9NUU6 356 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 SLC38A7Q9NVC3 462 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 SPG21Q9NZD8 308 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 PARP2Q9UGN5 583 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 PCDHB13Q9Y5F0 798 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 TRIP12Q14669 1992 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-203ENST00000465756 PAX3P23760 479 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 RABGGTBP53611 331 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 MYCT1Q8N699 235 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 ADAMTS3O15072 1205 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 CD2BP2O95400 341 aaKnown RBP11.86□□□□□ -0.51
NPHP3-203ENST00000465756 BMPR1AP36894 532 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 NASPP49321 788 aaPredicted RBP11.86□□□□□ -0.51
NPHP3-203ENST00000465756 PDXDC1Q6P996 788 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 SPRYD3Q8NCJ5 442 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 CTAGE1Q96RT6 745 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 AGO3Q9H9G7 860 aaKnown RBP11.86□□□□□ -0.51
NPHP3-203ENST00000465756 LOXHD1Q8IVV2 1947 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 DOCK5Q9H7D0 1870 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 C9IYK1 514 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 GOLGA6L22H0YM25 854 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 ACKR2O00590 384 aa11.86□□□□□ -0.51
NPHP3-203ENST00000465756 TOB1P50616 345 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms