RNA–Protein interactions for RNA: ENST00000465522.5

ITGA4-204, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,721 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-204ENST00000465522 GNAT1P11488 350 aa23.83■■□□□ 1.41
ITGA4-204ENST00000465522 NR2F2P24468 414 aa23.83■■□□□ 1.41
ITGA4-204ENST00000465522 RPL13P26373 211 aaKnown RBP23.83■■□□□ 1.41
ITGA4-204ENST00000465522 EEF1GP26641 437 aaKnown RBP23.83■■□□□ 1.41
ITGA4-204ENST00000465522 TFDP1Q14186 410 aa23.83■■□□□ 1.41
ITGA4-204ENST00000465522 CCSAPQ6IQ19 270 aaPredicted RBP23.83■■□□□ 1.41
ITGA4-204ENST00000465522 LRRC55Q6ZSA7 311 aa23.83■■□□□ 1.41
ITGA4-204ENST00000465522 MAP4K3Q8IVH8 894 aa23.83■■□□□ 1.41
ITGA4-204ENST00000465522 RNF149Q8NC42 400 aa23.83■■□□□ 1.41
ITGA4-204ENST00000465522 SCN10AQ9Y5Y9 1956 aa23.82■■□□□ 1.4
ITGA4-204ENST00000465522 C17orf102A2RUQ5 167 aa23.82■■□□□ 1.4
ITGA4-204ENST00000465522 GJB1P08034 283 aa23.82■■□□□ 1.4
ITGA4-204ENST00000465522 SLC9C1Q4G0N8 1177 aa23.82■■□□□ 1.4
ITGA4-204ENST00000465522 LHX8Q68G74 356 aa23.82■■□□□ 1.4
ITGA4-204ENST00000465522 FILIP1Q7Z7B0 1213 aa23.82■■□□□ 1.4
ITGA4-204ENST00000465522 CNOT6LQ96LI5 555 aaKnown RBP23.82■■□□□ 1.4
ITGA4-204ENST00000465522 MAP7D2Q96T17 732 aa23.82■■□□□ 1.4
ITGA4-204ENST00000465522 XPO4Q9C0E2 1151 aaKnown RBP23.82■■□□□ 1.4
ITGA4-204ENST00000465522 LIMA1Q9UHB6 759 aaKnown RBP23.82■■□□□ 1.4
ITGA4-204ENST00000465522 CBFA2T2O43439 604 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 NR3C1P04150 777 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 STRN3Q13033 797 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 NBPF20Q3BBV1 942 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 KCNN1Q92952 543 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 NLRP4Q96MN2 994 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 TMEM134Q9H6X4 195 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 AGPAT3Q9NRZ7 376 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 CGNQ9P2M7 1197 aaKnown RBP23.81■■□□□ 1.4
ITGA4-204ENST00000465522 MBLAC1A4D2B0 266 aaPredicted RBP23.81■■□□□ 1.4
ITGA4-204ENST00000465522 LRRC10BA6NIK2 292 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 EFNA5P52803 228 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 SNRPFP62306 86 aaKnown RBP23.81■■□□□ 1.4
ITGA4-204ENST00000465522 ADAM17P78536 824 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 KRT31Q15323 416 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 NFIL3Q16649 462 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 TAS1R3Q7RTX0 852 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 ZBTB8OSQ8IWT0 167 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 ZC3H3Q8IXZ2 948 aaKnown RBP23.81■■□□□ 1.4
ITGA4-204ENST00000465522 KIAA0319LQ8IZA0 1049 aa23.81■■□□□ 1.4
ITGA4-204ENST00000465522 NAP1L5Q96NT1 182 aaPredicted RBP23.81■■□□□ 1.4
ITGA4-204ENST00000465522 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.81■■□□□ 1.4
ITGA4-204ENST00000465522 GNA14O95837 355 aa23.8■■□□□ 1.4
ITGA4-204ENST00000465522 TPM3P06753 285 aa23.8■■□□□ 1.4
ITGA4-204ENST00000465522 CYP2C9P11712 490 aa23.8■■□□□ 1.4
ITGA4-204ENST00000465522 CCDC173Q0VFZ6 552 aa23.8■■□□□ 1.4
ITGA4-204ENST00000465522 HIC1Q14526 733 aa23.8■■□□□ 1.4
ITGA4-204ENST00000465522 MRFAP1L1Q96HT8 127 aa23.8■■□□□ 1.4
ITGA4-204ENST00000465522 ZNF668Q96K58 619 aaPredicted RBP23.8■■□□□ 1.4
ITGA4-204ENST00000465522 C2orf40Q9H1Z8 148 aa23.8■■□□□ 1.4
ITGA4-204ENST00000465522 SMIM35A0A1B0GVV1 85 aa23.79■■□□□ 1.4
ITGA4-204ENST00000465522 TREHO43280 583 aa23.79■■□□□ 1.4
ITGA4-204ENST00000465522 VTNP04004 478 aa23.79■■□□□ 1.4
ITGA4-204ENST00000465522 MTIF2P46199 727 aaKnown RBP23.79■■□□□ 1.4
ITGA4-204ENST00000465522 POU5F1BQ06416 359 aa23.79■■□□□ 1.4
ITGA4-204ENST00000465522 FILIP1LQ4L180 1135 aa23.79■■□□□ 1.4
ITGA4-204ENST00000465522 CDCA2Q69YH5 1023 aaPredicted RBP23.79■■□□□ 1.4
ITGA4-204ENST00000465522 APTXQ7Z2E3 356 aaKnown RBP23.79■■□□□ 1.4
ITGA4-204ENST00000465522 VTI1AQ96AJ9 217 aa23.79■■□□□ 1.4
ITGA4-204ENST00000465522 BICD1Q96G01 975 aa23.79■■□□□ 1.4
ITGA4-204ENST00000465522 CABYRO75952 493 aa23.79■■□□□ 1.4
ITGA4-204ENST00000465522 ZNF200P98182 395 aaPredicted RBP23.79■■□□□ 1.4
ITGA4-204ENST00000465522 CCDC40Q4G0X9 1142 aa23.79■■□□□ 1.4
ITGA4-204ENST00000465522 ARRDC4Q8NCT1 418 aa23.79■■□□□ 1.4
ITGA4-204ENST00000465522 PDLIM2Q96JY6 352 aa23.79■■□□□ 1.4
ITGA4-204ENST00000465522 TUBGCP2Q9BSJ2 902 aa23.79■■□□□ 1.4
ITGA4-204ENST00000465522 UNC93B1Q9H1C4 597 aa23.79■■□□□ 1.4
ITGA4-204ENST00000465522 VPS16Q9H269 839 aa23.79■■□□□ 1.4
ITGA4-204ENST00000465522 HNRNPDLO14979 420 aaKnown RBP23.78■■□□□ 1.4
ITGA4-204ENST00000465522 TPM2P07951 284 aa23.78■■□□□ 1.4
ITGA4-204ENST00000465522 HSPA8P11142 646 aaKnown RBP23.78■■□□□ 1.4
ITGA4-204ENST00000465522 HOXC8P31273 242 aa23.78■■□□□ 1.4
ITGA4-204ENST00000465522 ACLYP53396 1101 aa23.78■■□□□ 1.4
ITGA4-204ENST00000465522 COPB1P53618 953 aaKnown RBP23.78■■□□□ 1.4
ITGA4-204ENST00000465522 PTENP60484 403 aa23.78■■□□□ 1.4
ITGA4-204ENST00000465522 FAM47CQ5HY64 1035 aa23.78■■□□□ 1.4
ITGA4-204ENST00000465522 CEP135Q66GS9 1140 aa23.78■■□□□ 1.4
ITGA4-204ENST00000465522 SLC9A9Q8IVB4 645 aa23.78■■□□□ 1.4
ITGA4-204ENST00000465522 TSEN34Q9BSV6 310 aaKnown RBP23.78■■□□□ 1.4
ITGA4-204ENST00000465522 FAM49AQ9H0Q0 323 aaPredicted RBP23.78■■□□□ 1.4
ITGA4-204ENST00000465522 TAB2Q9NYJ8 693 aa23.78■■□□□ 1.4
ITGA4-204ENST00000465522 GTF2IRD1Q9UHL9 959 aa23.78■■□□□ 1.4
ITGA4-204ENST00000465522 PHLPP2Q6ZVD8 1323 aa23.78■■□□□ 1.4
ITGA4-204ENST00000465522 A0A087WZ62 844 aa23.77■■□□□ 1.4
ITGA4-204ENST00000465522 A0A1B0GTH6 734 aa23.77■■□□□ 1.4
ITGA4-204ENST00000465522 MOXD2PA6NHM9 499 aa23.77■■□□□ 1.4
ITGA4-204ENST00000465522 TISP43B9A030 160 aa23.77■■□□□ 1.4
ITGA4-204ENST00000465522 ANKRD63C9JTQ0 380 aa23.77■■□□□ 1.4
ITGA4-204ENST00000465522 MYCP01106 439 aaPredicted RBP23.77■■□□□ 1.4
ITGA4-204ENST00000465522 PRKCSHP14314 528 aaPredicted RBP23.77■■□□□ 1.4
ITGA4-204ENST00000465522 PHKA2P46019 1235 aa23.77■■□□□ 1.4
ITGA4-204ENST00000465522 CYP2J2P51589 502 aa23.77■■□□□ 1.4
ITGA4-204ENST00000465522 CDC42EP1Q00587 391 aa23.77■■□□□ 1.4
ITGA4-204ENST00000465522 MYBPC2Q14324 1141 aa23.77■■□□□ 1.4
ITGA4-204ENST00000465522 MAPK6Q16659 721 aa23.77■■□□□ 1.4
ITGA4-204ENST00000465522 ARMCX5Q6P1M9 558 aa23.77■■□□□ 1.4
ITGA4-204ENST00000465522 CTU1Q7Z7A3 348 aaKnown RBP23.77■■□□□ 1.4
ITGA4-204ENST00000465522 DRC7Q8IY82 874 aa23.77■■□□□ 1.4
ITGA4-204ENST00000465522 PPP1R9BQ96SB3 815 aa23.77■■□□□ 1.4
ITGA4-204ENST00000465522 PPP1R16BQ96T49 567 aa23.77■■□□□ 1.4
ITGA4-204ENST00000465522 FDXACB1Q9BRP7 624 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms