RNA–Protein interactions for RNA: ENST00000465505.2

SNX4-202, Transcript of sorting nexin 4, humanhuman

TSL 5

Gene SNX4, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-202ENST00000465505 SQSTM1Q13501 440 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 FAM50AQ14320 339 aaKnown RBP4.22□□□□□ -1.73
SNX4-202ENST00000465505 GORABQ5T7V8 394 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 PRAMEF9Q5VWM5 478 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 ZNF662Q6ZS27 426 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 MRGPRGQ86SM5 289 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 SDR16C5Q8N3Y7 309 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 AGAP2Q99490 1192 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 ELF4Q99607 663 aaPredicted RBP4.22□□□□□ -1.73
SNX4-202ENST00000465505 PRRX2Q99811 253 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 GPR87Q9BY21 358 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 PCIF1Q9H4Z3 704 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 CABP5Q9NP86 173 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 DNAI1Q9UI46 699 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 DMRT1Q9Y5R6 373 aa4.22□□□□□ -1.73
SNX4-202ENST00000465505 A0A0A6YYJ9 748 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 KLRG2A4D1S0 409 aaPredicted RBP4.21□□□□□ -1.74
SNX4-202ENST00000465505 CBX4O00257 560 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 DAPK3O43293 454 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 SDSP20132 328 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 KIR2DL3P43628 341 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 ADCY1Q08828 1119 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 ZNF174Q15697 407 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 FKBP15Q5T1M5 1219 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 PIK3R6Q5UE93 754 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 C1QL3Q5VWW1 255 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 CREB3L3Q68CJ9 461 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 CDCA2Q69YH5 1023 aaPredicted RBP4.21□□□□□ -1.74
SNX4-202ENST00000465505 UNQ6494/PRO21346Q6UXR6 183 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 HTR3DQ70Z44 454 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 ZNF575Q86XF7 245 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 ELOA2Q8IYF1 753 aaPredicted RBP4.21□□□□□ -1.74
SNX4-202ENST00000465505 RPUSD2Q8IZ73 545 aaKnown RBP4.21□□□□□ -1.74
SNX4-202ENST00000465505 ZNF512Q96ME7 567 aaPredicted RBP4.21□□□□□ -1.74
SNX4-202ENST00000465505 MNTQ99583 582 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 PITHD1Q9GZP4 211 aaPredicted RBP4.21□□□□□ -1.74
SNX4-202ENST00000465505 OSBPL2Q9H1P3 480 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 KANSL2Q9H9L4 492 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 POLR3BQ9NW08 1133 aaPredicted RBP4.21□□□□□ -1.74
SNX4-202ENST00000465505 SLC52A1Q9NWF4 448 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 TRPS1Q9UHF7 1281 aa4.21□□□□□ -1.74
SNX4-202ENST00000465505 NOP58Q9Y2X3 529 aaKnown RBP4.21□□□□□ -1.74
SNX4-202ENST00000465505 A0A0A6YYK5 440 aaPredicted RBP4.2□□□□□ -1.74
SNX4-202ENST00000465505 EXOC5O00471 708 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 PPP1R12AO14974 1030 aaPredicted RBP4.2□□□□□ -1.74
SNX4-202ENST00000465505 FOXN1O15353 648 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 RPS6KA4O75676 772 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 PRPF6O94906 941 aaKnown RBP4.2□□□□□ -1.74
SNX4-202ENST00000465505 JMJD7P0C870 316 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 NANOS3P60323 173 aaKnown RBP4.2□□□□□ -1.74
SNX4-202ENST00000465505 SMAD3P84022 425 aaKnown RBP4.2□□□□□ -1.74
SNX4-202ENST00000465505 ADCY2Q08462 1091 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 RALBP1Q15311 655 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 RABL3Q5HYI8 236 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 MFSD5Q6N075 450 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 ESRP1Q6NXG1 681 aaKnown RBP4.2□□□□□ -1.74
SNX4-202ENST00000465505 RINLQ6ZS11 566 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 MRGPREQ86SM8 312 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 CMTM4Q8IZR5 234 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.2□□□□□ -1.74
SNX4-202ENST00000465505 RPGRQ92834 1020 aaKnown RBP4.2□□□□□ -1.74
SNX4-202ENST00000465505 HAS1Q92839 578 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 SOX7Q9BT81 388 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 TTPALQ9BTX7 342 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 OSBPL6Q9BZF3 934 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 RCAN3Q9UKA8 241 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 SPO11Q9Y5K1 396 aa4.2□□□□□ -1.74
SNX4-202ENST00000465505 GRXCR1A8MXD5 290 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 GOLGA6L6A8MZA4 724 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 RAMP2O60895 175 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 FAM20BO75063 409 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 MFAP3LO75121 409 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 RFPL3O75679 317 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 COL10A1Q03692 680 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 SPIDRQ14159 915 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 SF3A1Q15459 793 aaKnown RBP4.19□□□□□ -1.74
SNX4-202ENST00000465505 NAIF1Q69YI7 327 aaPredicted RBP4.19□□□□□ -1.74
SNX4-202ENST00000465505 KRT40Q6A162 431 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 LAIR1Q6GTX8 287 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 TIGD7Q6NT04 549 aaPredicted RBP4.19□□□□□ -1.74
SNX4-202ENST00000465505 UBE2R2Q712K3 238 aaPredicted RBP4.19□□□□□ -1.74
SNX4-202ENST00000465505 PHYKPLQ8IUZ5 450 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 SMC5Q8IY18 1101 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 MDGA1Q8NFP4 955 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 PPP1R14CQ8TAE6 165 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 ATXN2LQ8WWM7 1075 aaKnown RBP4.19□□□□□ -1.74
SNX4-202ENST00000465505 RTF1Q92541 710 aaKnown RBP4.19□□□□□ -1.74
SNX4-202ENST00000465505 ZG16BQ96DA0 208 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 DRC1Q96MC2 740 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 ORAI3Q9BRQ5 295 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 MYL10Q9BUA6 226 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 MTG2Q9H4K7 406 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 NRDE2Q9H7Z3 1164 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 C14orf93Q9H972 538 aaKnown RBP4.19□□□□□ -1.74
SNX4-202ENST00000465505 OXSMQ9NWU1 459 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 SYNPO2Q9UMS6 1093 aa4.19□□□□□ -1.74
SNX4-202ENST00000465505 KAT6BQ8WYB5 2073 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 ANKRD62A6NC57 917 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 TMEM191CA6NGB0 347 aa4.18□□□□□ -1.74
SNX4-202ENST00000465505 MTSS1O43312 755 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms