RNA–Protein interactions for RNA: ENST00000465120.3

HOXB3-204, Transcript of homeobox B3, humanhuman

TSL 3 BASIC

Gene HOXB3, Length 943 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-204ENST00000465120 FSCN2O14926 492 aa17.27■□□□□ 0.36
HOXB3-204ENST00000465120 ZC3H11AO75152 810 aaKnown RBP eCLIP17.27■□□□□ 0.36
HOXB3-204ENST00000465120 FDPSP14324 419 aaKnown RBP17.27■□□□□ 0.36
HOXB3-204ENST00000465120 ATF7P17544 494 aaPredicted RBP17.27■□□□□ 0.36
HOXB3-204ENST00000465120 PLA2G5P39877 138 aa17.27■□□□□ 0.36
HOXB3-204ENST00000465120 RFC5P40937 340 aa17.27■□□□□ 0.36
HOXB3-204ENST00000465120 TECP42680 631 aa17.27■□□□□ 0.36
HOXB3-204ENST00000465120 BCAR1P56945 870 aa17.27■□□□□ 0.36
HOXB3-204ENST00000465120 RNASELQ05823 741 aaKnown RBP17.27■□□□□ 0.36
HOXB3-204ENST00000465120 CTTNQ14247 550 aaKnown RBP17.27■□□□□ 0.36
HOXB3-204ENST00000465120 GLB1LQ6UWU2 654 aa17.27■□□□□ 0.36
HOXB3-204ENST00000465120 RNF135Q8IUD6 432 aa17.27■□□□□ 0.36
HOXB3-204ENST00000465120 TPH2Q8IWU9 490 aa17.27■□□□□ 0.36
HOXB3-204ENST00000465120 C4orf19Q8IY42 314 aa17.27■□□□□ 0.36
HOXB3-204ENST00000465120 PSPC1Q8WXF1 523 aaKnown RBP17.27■□□□□ 0.36
HOXB3-204ENST00000465120 GTF3C6Q969F1 213 aa17.27■□□□□ 0.36
HOXB3-204ENST00000465120 TMEM169Q96HH4 297 aa17.27■□□□□ 0.36
HOXB3-204ENST00000465120 APOL5Q9BWW9 433 aa17.27■□□□□ 0.36
HOXB3-204ENST00000465120 ZSWIM4Q9H7M6 989 aa17.27■□□□□ 0.36
HOXB3-204ENST00000465120 FAM105AQ9NUU6 356 aa17.27■□□□□ 0.36
HOXB3-204ENST00000465120 WRAP73Q9P2S5 460 aaPredicted RBP17.27■□□□□ 0.36
HOXB3-204ENST00000465120 MUTYHQ9UIF7 546 aa17.27■□□□□ 0.36
HOXB3-204ENST00000465120 LARGE1O95461 756 aa17.26■□□□□ 0.35
HOXB3-204ENST00000465120 RAB27AP51159 221 aa17.26■□□□□ 0.35
HOXB3-204ENST00000465120 SMC1AQ14683 1233 aaKnown RBP17.26■□□□□ 0.35
HOXB3-204ENST00000465120 CALCRLQ16602 461 aa17.26■□□□□ 0.35
HOXB3-204ENST00000465120 ERICH6BQ5W0A0 696 aa17.26■□□□□ 0.35
HOXB3-204ENST00000465120 SLC39A11Q8N1S5 342 aa17.26■□□□□ 0.35
HOXB3-204ENST00000465120 TCP11Q8WWU5 503 aa17.26■□□□□ 0.35
HOXB3-204ENST00000465120 PGBD4Q96DM1 585 aa17.26■□□□□ 0.35
HOXB3-204ENST00000465120 RPGRIP1Q96KN7 1286 aa17.26■□□□□ 0.35
HOXB3-204ENST00000465120 CCDC43Q96MW1 224 aaKnown RBP17.26■□□□□ 0.35
HOXB3-204ENST00000465120 GBP3Q9H0R5 595 aa17.26■□□□□ 0.35
HOXB3-204ENST00000465120 PCDHA12Q9UN75 941 aa17.26■□□□□ 0.35
HOXB3-204ENST00000465120 PPME1Q9Y570 386 aa17.26■□□□□ 0.35
HOXB3-204ENST00000465120 BTBD18B2RXH4 712 aa17.25■□□□□ 0.35
HOXB3-204ENST00000465120 ZBTB39O15060 712 aa17.25■□□□□ 0.35
HOXB3-204ENST00000465120 CXCL14O95715 111 aa17.25■□□□□ 0.35
HOXB3-204ENST00000465120 LAMTOR4Q0VGL1 99 aa17.25■□□□□ 0.35
HOXB3-204ENST00000465120 NOMO2Q5JPE7 1267 aa17.25■□□□□ 0.35
HOXB3-204ENST00000465120 VN1R2Q8NFZ6 395 aa17.25■□□□□ 0.35
HOXB3-204ENST00000465120 DHX33Q9H6R0 707 aaKnown RBP17.25■□□□□ 0.35
HOXB3-204ENST00000465120 IFT122Q9HBG6 1241 aa17.25■□□□□ 0.35
HOXB3-204ENST00000465120 ASAP2O43150 1006 aa17.24■□□□□ 0.35
HOXB3-204ENST00000465120 GAS2O43903 313 aaKnown RBP17.24■□□□□ 0.35
HOXB3-204ENST00000465120 JAK2O60674 1132 aa17.24■□□□□ 0.35
HOXB3-204ENST00000465120 ATP2B1P20020 1258 aa17.24■□□□□ 0.35
HOXB3-204ENST00000465120 TXKP42681 527 aa17.24■□□□□ 0.35
HOXB3-204ENST00000465120 EMC2Q15006 297 aa17.24■□□□□ 0.35
HOXB3-204ENST00000465120 ANKRD54Q6NXT1 300 aa17.24■□□□□ 0.35
HOXB3-204ENST00000465120 SRGAP1Q7Z6B7 1085 aa17.24■□□□□ 0.35
HOXB3-204ENST00000465120 DIS3L2Q8IYB7 885 aaKnown RBP17.24■□□□□ 0.35
HOXB3-204ENST00000465120 RNF149Q8NC42 400 aa17.24■□□□□ 0.35
HOXB3-204ENST00000465120 NSUN7Q8NE18 718 aaKnown RBP17.24■□□□□ 0.35
HOXB3-204ENST00000465120 URGCPQ8TCY9 931 aa17.24■□□□□ 0.35
HOXB3-204ENST00000465120 MTRQ99707 1265 aa17.24■□□□□ 0.35
HOXB3-204ENST00000465120 EIF2AK1Q9BQI3 630 aaKnown RBP17.24■□□□□ 0.35
HOXB3-204ENST00000465120 TRAIPQ9BWF2 469 aa17.24■□□□□ 0.35
HOXB3-204ENST00000465120 PHF7Q9BWX1 381 aaPredicted RBP17.24■□□□□ 0.35
HOXB3-204ENST00000465120 AGPAT5Q9NUQ2 364 aa17.24■□□□□ 0.35
HOXB3-204ENST00000465120 PCDHB2Q9Y5E7 798 aa17.24■□□□□ 0.35
HOXB3-204ENST00000465120 MEIS3P2A8K0S8 358 aa17.23■□□□□ 0.35
HOXB3-204ENST00000465120 ERLIN2O94905 339 aa17.23■□□□□ 0.35
HOXB3-204ENST00000465120 SLITRK3O94933 977 aa17.23■□□□□ 0.35
HOXB3-204ENST00000465120 VPS52Q8N1B4 723 aa17.23■□□□□ 0.35
HOXB3-204ENST00000465120 MRPL43Q8N983 215 aaKnown RBP17.23■□□□□ 0.35
HOXB3-204ENST00000465120 RSPH1Q8WYR4 309 aa17.23■□□□□ 0.35
HOXB3-204ENST00000465120 FAM193BQ96PV7 902 aaPredicted RBP17.23■□□□□ 0.35
HOXB3-204ENST00000465120 NRDE2Q9H7Z3 1164 aa17.23■□□□□ 0.35
HOXB3-204ENST00000465120 TTC12Q9H892 705 aaPredicted RBP17.23■□□□□ 0.35
HOXB3-204ENST00000465120 TBC1D13Q9NVG8 400 aa17.23■□□□□ 0.35
HOXB3-204ENST00000465120 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.22■□□□□ 0.35
HOXB3-204ENST00000465120 CARNS1A5YM72 827 aa17.22■□□□□ 0.35
HOXB3-204ENST00000465120 C2orf71A6NGG8 1288 aa17.22■□□□□ 0.35
HOXB3-204ENST00000465120 NEMFO60524 1076 aa17.22■□□□□ 0.35
HOXB3-204ENST00000465120 ZNF623O75123 536 aa17.22■□□□□ 0.35
HOXB3-204ENST00000465120 OFD1O75665 1012 aa17.22■□□□□ 0.35
HOXB3-204ENST00000465120 GUCY1B3Q02153 619 aa17.22■□□□□ 0.35
HOXB3-204ENST00000465120 SPIRE1Q08AE8 756 aa17.22■□□□□ 0.35
HOXB3-204ENST00000465120 NCBP1Q09161 790 aaKnown RBP17.22■□□□□ 0.35
HOXB3-204ENST00000465120 SAFBQ15424 915 aaKnown RBP eCLIP17.22■□□□□ 0.35
HOXB3-204ENST00000465120 HERC4Q5GLZ8 1057 aaPredicted RBP17.22■□□□□ 0.35
HOXB3-204ENST00000465120 TMEM184AQ6ZMB5 413 aa17.22■□□□□ 0.35
HOXB3-204ENST00000465120 FERMT3Q86UX7 667 aa17.22■□□□□ 0.35
HOXB3-204ENST00000465120 CASP10Q92851 521 aa17.22■□□□□ 0.35
HOXB3-204ENST00000465120 TNFRSF25Q93038 417 aa17.22■□□□□ 0.35
HOXB3-204ENST00000465120 MINDY3Q9H8M7 445 aa17.22■□□□□ 0.35
HOXB3-204ENST00000465120 ARIH1Q9Y4X5 557 aaPredicted RBP17.22■□□□□ 0.35
HOXB3-204ENST00000465120 LOC730098B7Z3J9 87 aa17.21■□□□□ 0.35
HOXB3-204ENST00000465120 INO80B-WBP1J3KQ70 363 aa17.21■□□□□ 0.35
HOXB3-204ENST00000465120 GALTP07902 379 aa17.21■□□□□ 0.35
HOXB3-204ENST00000465120 HOXB8P17481 243 aaPredicted RBP17.21■□□□□ 0.35
HOXB3-204ENST00000465120 SP100P23497 879 aaPredicted RBP17.21■□□□□ 0.35
HOXB3-204ENST00000465120 TFDP1Q14186 410 aa17.21■□□□□ 0.35
HOXB3-204ENST00000465120 MXD4Q14582 209 aaPredicted RBP17.21■□□□□ 0.35
HOXB3-204ENST00000465120 CBX2Q14781 532 aaPredicted RBP17.21■□□□□ 0.35
HOXB3-204ENST00000465120 TPRNQ4KMQ1 711 aa17.21■□□□□ 0.35
HOXB3-204ENST00000465120 CES5AQ6NT32 575 aa17.21■□□□□ 0.35
HOXB3-204ENST00000465120 AUTS2Q8WXX7 1259 aa17.21■□□□□ 0.35
HOXB3-204ENST00000465120 IGSF21Q96ID5 467 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms