RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 TNFAIP3P21580 790 aa13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 SPIRE1Q08AE8 756 aa13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 TNIP1Q15025 636 aa13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 C6orf118Q5T5N4 469 aa13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 KCNV2Q8TDN2 545 aa13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 L3MBTL3Q96JM7 780 aaPredicted RBP13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 ACP6Q9NPH0 428 aa13.59□□□□□ -0.23
CLCNKA-204ENST00000464764 MPHOSPH10O00566 681 aaKnown RBP13.58□□□□□ -0.23
CLCNKA-204ENST00000464764 CYP2J2P51589 502 aa13.58□□□□□ -0.23
CLCNKA-204ENST00000464764 MPP2Q14168 576 aa13.58□□□□□ -0.23
CLCNKA-204ENST00000464764 NUGGCQ68CJ6 796 aa13.58□□□□□ -0.23
CLCNKA-204ENST00000464764 CCDC137Q6PK04 289 aaKnown RBP13.58□□□□□ -0.23
CLCNKA-204ENST00000464764 ARHGEF10LQ9HCE6 1279 aa13.58□□□□□ -0.23
CLCNKA-204ENST00000464764 KCNK9Q9NPC2 374 aa13.58□□□□□ -0.23
CLCNKA-204ENST00000464764 TYW1Q9NV66 732 aaKnown RBP13.58□□□□□ -0.23
CLCNKA-204ENST00000464764 CTTNBP2NLQ9P2B4 639 aa13.58□□□□□ -0.23
CLCNKA-204ENST00000464764 INTUQ9ULD6 942 aa13.58□□□□□ -0.23
CLCNKA-204ENST00000464764 ZBTB5O15062 677 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 AGTP01019 485 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 SNHG28P0DPA3 235 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 PYGMP11217 842 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 ZNF268Q14587 947 aaPredicted RBP13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 MESDQ14696 234 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 BZW1Q7L1Q6 419 aaKnown RBP13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 FAM186BQ8IYM0 893 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 SYT2Q8N9I0 419 aaPredicted RBP13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 BORCS6Q96GS4 357 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 PWWP2AQ96N64 755 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 ANO3Q9BYT9 981 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 PCDHA3Q9Y5H8 950 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 PCDHA1Q9Y5I3 950 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 PITPNM2Q9BZ72 1349 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 hCG_1984214I3L0E3 225 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 GSTA1P08263 222 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 LMNB1P20700 586 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 NOVP48745 357 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 MFSD14BQ5SR56 506 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 COL23A1Q86Y22 540 aaPredicted RBP13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 CCDC105Q8IYK2 499 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 FITM2Q8N6M3 262 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 ZNF713Q8N859 430 aaPredicted RBP13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 KLHL29Q96CT2 875 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 SPDL1Q96EA4 605 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 SYT11Q9BT88 431 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 STK33Q9BYT3 514 aa13.58□□□□□ -0.24
CLCNKA-204ENST00000464764 DDX60LQ5H9U9 1706 aaKnown RBP13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 TMEM120BA0PK00 339 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 FAM187AA6NFU0 413 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 PEX19P40855 299 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 CTTNQ14247 550 aaKnown RBP13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 PHLDB3Q6NSJ2 640 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 HOOK2Q96ED9 719 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 RMDN2Q96LZ7 410 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 CD209Q9NNX6 404 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 DDX4Q9NQI0 724 aaKnown RBP13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 USP15Q9Y4E8 981 aaPredicted RBP13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 NCANO14594 1321 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 ZNF335Q9H4Z2 1342 aaPredicted RBP13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 FAM86B1E9PN63 330 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 EML1O00423 815 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 PHF2O75151 1096 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 FTLP02792 175 aaPredicted RBP13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 FAM86B2P0C5J1 330 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 FMO5P49326 533 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 ADCY2Q08462 1091 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 DHX34Q14147 1143 aaKnown RBP13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 QRICH1Q2TAL8 776 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 TPTE2Q6XPS3 522 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 SLC17A8Q8NDX2 589 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 ARHGEF2Q92974 986 aaKnown RBP13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 FAM167BQ9BTA0 163 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 METTL14Q9HCE5 456 aaKnown RBP13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 TBK1Q9UHD2 729 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 PFASO15067 1338 aa13.57□□□□□ -0.24
CLCNKA-204ENST00000464764 COMTP21964 271 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 RPL13P26373 211 aaKnown RBP13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 SNX1Q13596 522 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 TRIP13Q15645 432 aaPredicted RBP13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 ZNF804AQ7Z570 1209 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 ROBO1Q9Y6N7 1651 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 FAM196BA6NMK8 535 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 TTLL1O95922 423 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 HOXA7P31268 230 aaPredicted RBP13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 PDE6CP51160 858 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 GPSM2P81274 684 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 RNASELQ05823 741 aaKnown RBP13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 RIPK1Q13546 671 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 GALNTL6Q49A17 601 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 VSTM1Q6UX27 236 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 CRELD2Q6UXH1 353 aaPredicted RBP13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 MYCT1Q8N699 235 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 ETNPPLQ8TBG4 499 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 NAP1L3Q99457 506 aaPredicted RBP13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 RASAL2Q9UJF2 1139 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 DOT1LQ8TEK3 1739 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 MYO3BQ8WXR4 1341 aa13.56□□□□□ -0.24
CLCNKA-204ENST00000464764 TBCAO75347 108 aaKnown RBP13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 CHKAP35790 457 aa13.55□□□□□ -0.24
CLCNKA-204ENST00000464764 NT5C2P49902 561 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms