RNA–Protein interactions for RNA: ENST00000464750.5

U2AF1-206, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-206ENST00000464750 FAM50BQ9Y247 325 aa28.83■■■□□ 2.21
U2AF1-206ENST00000464750 ASAP2O43150 1006 aa28.82■■■□□ 2.2
U2AF1-206ENST00000464750 PPM1AP35813 382 aa28.82■■■□□ 2.2
U2AF1-206ENST00000464750 NDUFV1P49821 464 aa28.82■■■□□ 2.2
U2AF1-206ENST00000464750 PLCB3Q01970 1234 aa28.82■■■□□ 2.2
U2AF1-206ENST00000464750 ORC2Q13416 577 aaPredicted RBP28.82■■■□□ 2.2
U2AF1-206ENST00000464750 ADAM15Q13444 863 aa28.82■■■□□ 2.2
U2AF1-206ENST00000464750 RBM23Q86U06 439 aaKnown RBP28.82■■■□□ 2.2
U2AF1-206ENST00000464750 MRPS27Q92552 414 aaKnown RBP28.82■■■□□ 2.2
U2AF1-206ENST00000464750 LPPQ93052 612 aa28.82■■■□□ 2.2
U2AF1-206ENST00000464750 CD320Q9NPF0 282 aa28.82■■■□□ 2.2
U2AF1-206ENST00000464750 DGAT1O75907 488 aa28.81■■■□□ 2.2
U2AF1-206ENST00000464750 OR52Z1P0C646 297 aa28.81■■■□□ 2.2
U2AF1-206ENST00000464750 RARRES1P49788 294 aa28.81■■■□□ 2.2
U2AF1-206ENST00000464750 ERVFC1P60507 584 aa28.81■■■□□ 2.2
U2AF1-206ENST00000464750 ZNF174Q15697 407 aa28.81■■■□□ 2.2
U2AF1-206ENST00000464750 LONRF3Q496Y0 759 aa28.81■■■□□ 2.2
U2AF1-206ENST00000464750 NOSTRINQ8IVI9 506 aa28.81■■■□□ 2.2
U2AF1-206ENST00000464750 EFHBQ8N7U6 833 aa28.81■■■□□ 2.2
U2AF1-206ENST00000464750 LZTS1Q9Y250 596 aa28.81■■■□□ 2.2
U2AF1-206ENST00000464750 FSCN2O14926 492 aa28.8■■■□□ 2.2
U2AF1-206ENST00000464750 MXD4Q14582 209 aaPredicted RBP28.8■■■□□ 2.2
U2AF1-206ENST00000464750 TTC38Q5R3I4 469 aa28.8■■■□□ 2.2
U2AF1-206ENST00000464750 PIGOQ8TEQ8 1089 aa28.8■■■□□ 2.2
U2AF1-206ENST00000464750 RSPH1Q8WYR4 309 aa28.8■■■□□ 2.2
U2AF1-206ENST00000464750 PUF60Q9UHX1 559 aaKnown RBP28.8■■■□□ 2.2
U2AF1-206ENST00000464750 MEIS3P2A8K0S8 358 aa28.79■■■□□ 2.2
U2AF1-206ENST00000464750 PLPP4Q5VZY2 271 aa28.79■■■□□ 2.2
U2AF1-206ENST00000464750 PDE12Q6L8Q7 609 aaKnown RBP28.79■■■□□ 2.2
U2AF1-206ENST00000464750 GLB1LQ6UWU2 654 aa28.79■■■□□ 2.2
U2AF1-206ENST00000464750 GJD3Q8N144 294 aa28.79■■■□□ 2.2
U2AF1-206ENST00000464750 ASAP3Q8TDY4 903 aa28.79■■■□□ 2.2
U2AF1-206ENST00000464750 TLE6Q9H808 572 aa28.79■■■□□ 2.2
U2AF1-206ENST00000464750 TUFT1Q9NNX1 390 aa28.79■■■□□ 2.2
U2AF1-206ENST00000464750 SPG21Q9NZD8 308 aa28.79■■■□□ 2.2
U2AF1-206ENST00000464750 A0A087WWV3 80 aa28.78■■■□□ 2.2
U2AF1-206ENST00000464750 ST18O60284 1047 aa28.78■■■□□ 2.2
U2AF1-206ENST00000464750 ZNF623O75123 536 aa28.78■■■□□ 2.2
U2AF1-206ENST00000464750 SPATA31C1P0DKV0 1188 aa28.78■■■□□ 2.2
U2AF1-206ENST00000464750 TECP42680 631 aa28.78■■■□□ 2.2
U2AF1-206ENST00000464750 SMAD4Q13485 552 aaKnown RBP28.78■■■□□ 2.2
U2AF1-206ENST00000464750 TFDP1Q14186 410 aa28.78■■■□□ 2.2
U2AF1-206ENST00000464750 SLC39A11Q8N1S5 342 aa28.78■■■□□ 2.2
U2AF1-206ENST00000464750 TCF25Q9BQ70 676 aa28.78■■■□□ 2.2
U2AF1-206ENST00000464750 ENTPD7Q9NQZ7 604 aa28.78■■■□□ 2.2
U2AF1-206ENST00000464750 CD207Q9UJ71 328 aa28.78■■■□□ 2.2
U2AF1-206ENST00000464750 NOL7Q9UMY1 257 aaKnown RBP28.78■■■□□ 2.2
U2AF1-206ENST00000464750 INPP5FQ9Y2H2 1132 aa28.78■■■□□ 2.2
U2AF1-206ENST00000464750 PCDHB2Q9Y5E7 798 aa28.78■■■□□ 2.2
U2AF1-206ENST00000464750 PER2O15055 1255 aa28.77■■■□□ 2.2
U2AF1-206ENST00000464750 MBTPS2O43462 519 aa28.77■■■□□ 2.2
U2AF1-206ENST00000464750 USO1O60763 962 aaKnown RBP28.77■■■□□ 2.2
U2AF1-206ENST00000464750 MED24O75448 989 aa28.77■■■□□ 2.2
U2AF1-206ENST00000464750 ERLIN2O94905 339 aa28.77■■■□□ 2.2
U2AF1-206ENST00000464750 GLP2RO95838 553 aa28.77■■■□□ 2.2
U2AF1-206ENST00000464750 SSTR3P32745 418 aaPredicted RBP28.77■■■□□ 2.2
U2AF1-206ENST00000464750 TRAPPC10P48553 1259 aa28.77■■■□□ 2.2
U2AF1-206ENST00000464750 PTENP60484 403 aa28.77■■■□□ 2.2
U2AF1-206ENST00000464750 KRT17Q04695 432 aa28.77■■■□□ 2.2
U2AF1-206ENST00000464750 CAPSQ13938 189 aa28.77■■■□□ 2.2
U2AF1-206ENST00000464750 CATSPER3Q86XQ3 398 aa28.77■■■□□ 2.2
U2AF1-206ENST00000464750 KHSRPQ92945 711 aaKnown RBP eCLIP28.77■■■□□ 2.2
U2AF1-206ENST00000464750 PGBD4Q96DM1 585 aa28.77■■■□□ 2.2
U2AF1-206ENST00000464750 UPF2Q9HAU5 1272 aaKnown RBP28.77■■■□□ 2.2
U2AF1-206ENST00000464750 XRCC6P12956 609 aaKnown RBP eCLIP28.76■■■□□ 2.19
U2AF1-206ENST00000464750 HOXA11P31270 313 aaPredicted RBP28.76■■■□□ 2.19
U2AF1-206ENST00000464750 ARL2P36404 184 aa28.76■■■□□ 2.19
U2AF1-206ENST00000464750 BCAR1P56945 870 aa28.76■■■□□ 2.19
U2AF1-206ENST00000464750 NBR1Q14596 966 aa28.76■■■□□ 2.19
U2AF1-206ENST00000464750 DUSP6Q16828 381 aa28.76■■■□□ 2.19
U2AF1-206ENST00000464750 NOMO2Q5JPE7 1267 aa28.76■■■□□ 2.19
U2AF1-206ENST00000464750 UBXN11Q5T124 520 aa28.76■■■□□ 2.19
U2AF1-206ENST00000464750 ERMNQ8TAM6 284 aa28.76■■■□□ 2.19
U2AF1-206ENST00000464750 MSLNLQ96KJ4 702 aa28.76■■■□□ 2.19
U2AF1-206ENST00000464750 EPHX3Q9H6B9 360 aa28.76■■■□□ 2.19
U2AF1-206ENST00000464750 TBC1D13Q9NVG8 400 aa28.76■■■□□ 2.19
U2AF1-206ENST00000464750 CLEC1BQ9P126 229 aa28.76■■■□□ 2.19
U2AF1-206ENST00000464750 BARX2Q9UMQ3 279 aaPredicted RBP28.76■■■□□ 2.19
U2AF1-206ENST00000464750 INO80B-WBP1J3KQ70 363 aa28.75■■■□□ 2.19
U2AF1-206ENST00000464750 TSPAN1O60635 241 aa28.75■■■□□ 2.19
U2AF1-206ENST00000464750 ZC3H11AO75152 810 aaKnown RBP eCLIP28.75■■■□□ 2.19
U2AF1-206ENST00000464750 OFD1O75665 1012 aa28.75■■■□□ 2.19
U2AF1-206ENST00000464750 ZP2Q05996 745 aa28.75■■■□□ 2.19
U2AF1-206ENST00000464750 IFNLR1Q8IU57 520 aaPredicted RBP28.75■■■□□ 2.19
U2AF1-206ENST00000464750 CDCA3Q99618 268 aaPredicted RBP28.75■■■□□ 2.19
U2AF1-206ENST00000464750 POLR3CQ9BUI4 534 aaPredicted RBP28.75■■■□□ 2.19
U2AF1-206ENST00000464750 POLR3FQ9H1D9 316 aaPredicted RBP28.75■■■□□ 2.19
U2AF1-206ENST00000464750 PRKAG3Q9UGI9 489 aa28.75■■■□□ 2.19
U2AF1-206ENST00000464750 FSD2A1L4K1 749 aa28.74■■■□□ 2.19
U2AF1-206ENST00000464750 NT5C1B-RDH14C9J2C7 533 aa28.74■■■□□ 2.19
U2AF1-206ENST00000464750 GLRA2P23416 452 aa28.74■■■□□ 2.19
U2AF1-206ENST00000464750 U2AF2P26368 475 aaKnown RBP eCLIP28.74■■■□□ 2.19
U2AF1-206ENST00000464750 ALDH7A1P49419 539 aaKnown RBP28.74■■■□□ 2.19
U2AF1-206ENST00000464750 PCBP1Q15365 356 aaKnown RBP eCLIP28.74■■■□□ 2.19
U2AF1-206ENST00000464750 SMAD2Q15796 467 aaKnown RBP28.74■■■□□ 2.19
U2AF1-206ENST00000464750 POTEGQ6S5H5 508 aa28.74■■■□□ 2.19
U2AF1-206ENST00000464750 AGMOQ6ZNB7 445 aa28.74■■■□□ 2.19
U2AF1-206ENST00000464750 C1QTNF1Q9BXJ1 281 aa28.74■■■□□ 2.19
U2AF1-206ENST00000464750 NGRNQ9NPE2 291 aaKnown RBP28.74■■■□□ 2.19
U2AF1-206ENST00000464750 RNASELQ05823 741 aaKnown RBP28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms