RNA–Protein interactions for RNA: ENST00000464616.6

GARNL3-213, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-213ENST00000464616 HECAQ9UBI9 543 aaPredicted RBP4.56□□□□□ -1.68
GARNL3-213ENST00000464616 B4GALT6Q9UBX8 382 aa4.56□□□□□ -1.68
GARNL3-213ENST00000464616 CDK11AQ9UQ88 783 aaPredicted RBP4.56□□□□□ -1.68
GARNL3-213ENST00000464616 DMRT1Q9Y5R6 373 aa4.56□□□□□ -1.68
GARNL3-213ENST00000464616 DVL2O14641 736 aa4.55□□□□□ -1.68
GARNL3-213ENST00000464616 RHOBTB3O94955 611 aa4.55□□□□□ -1.68
GARNL3-213ENST00000464616 CLSTN1O94985 981 aa4.55□□□□□ -1.68
GARNL3-213ENST00000464616 HK1P19367 917 aa4.55□□□□□ -1.68
GARNL3-213ENST00000464616 MECP2P51608 486 aaKnown RBP4.55□□□□□ -1.68
GARNL3-213ENST00000464616 SPIDRQ14159 915 aa4.55□□□□□ -1.68
GARNL3-213ENST00000464616 ZNF460Q14592 562 aa4.55□□□□□ -1.68
GARNL3-213ENST00000464616 TAF7LQ5H9L4 462 aa4.55□□□□□ -1.68
GARNL3-213ENST00000464616 LY6G5CQ5SRR4 150 aa4.55□□□□□ -1.68
GARNL3-213ENST00000464616 CDCA2Q69YH5 1023 aaPredicted RBP4.55□□□□□ -1.68
GARNL3-213ENST00000464616 ZNF627Q7L945 461 aa4.55□□□□□ -1.68
GARNL3-213ENST00000464616 CPT1CQ8TCG5 803 aa4.55□□□□□ -1.68
GARNL3-213ENST00000464616 NKD2Q969F2 451 aaPredicted RBP4.55□□□□□ -1.68
GARNL3-213ENST00000464616 FERMT2Q96AC1 680 aa4.55□□□□□ -1.68
GARNL3-213ENST00000464616 ELF4Q99607 663 aaPredicted RBP4.55□□□□□ -1.68
GARNL3-213ENST00000464616 CPPED1Q9BRF8 314 aaPredicted RBP4.55□□□□□ -1.68
GARNL3-213ENST00000464616 TMX1Q9H3N1 280 aa4.55□□□□□ -1.68
GARNL3-213ENST00000464616 POFUT1Q9H488 388 aa4.55□□□□□ -1.68
GARNL3-213ENST00000464616 EIF2B4Q9UI10 523 aaKnown RBP4.55□□□□□ -1.68
GARNL3-213ENST00000464616 SORCS3Q9UPU3 1222 aa4.55□□□□□ -1.68
GARNL3-213ENST00000464616 SCAF4O95104 1147 aaKnown RBP4.54□□□□□ -1.68
GARNL3-213ENST00000464616 PCDH8O95206 1070 aa4.54□□□□□ -1.68
GARNL3-213ENST00000464616 ABHD16AO95870 558 aa4.54□□□□□ -1.68
GARNL3-213ENST00000464616 CD40P25942 277 aa4.54□□□□□ -1.68
GARNL3-213ENST00000464616 TOB2Q14106 344 aaPredicted RBP4.54□□□□□ -1.68
GARNL3-213ENST00000464616 TIGD2Q4W5G0 525 aa4.54□□□□□ -1.68
GARNL3-213ENST00000464616 KRTAP5-3Q6L8H2 238 aa4.54□□□□□ -1.68
GARNL3-213ENST00000464616 KIAA1841Q6NSI8 718 aa4.54□□□□□ -1.68
GARNL3-213ENST00000464616 KCNV1Q6PIU1 500 aa4.54□□□□□ -1.68
GARNL3-213ENST00000464616 MDGA1Q8NFP4 955 aa4.54□□□□□ -1.68
GARNL3-213ENST00000464616 PROKR1Q8TCW9 393 aa4.54□□□□□ -1.68
GARNL3-213ENST00000464616 RTF1Q92541 710 aaKnown RBP4.54□□□□□ -1.68
GARNL3-213ENST00000464616 C16orf92Q96LL3 132 aa4.54□□□□□ -1.68
GARNL3-213ENST00000464616 CLUHP3Q96NS8 147 aa4.54□□□□□ -1.68
GARNL3-213ENST00000464616 MYL10Q9BUA6 226 aa4.54□□□□□ -1.68
GARNL3-213ENST00000464616 MAGEC2Q9UBF1 373 aaPredicted RBP4.54□□□□□ -1.68
GARNL3-213ENST00000464616 SPO11Q9Y5K1 396 aa4.54□□□□□ -1.68
GARNL3-213ENST00000464616 CBX4O00257 560 aa4.53□□□□□ -1.68
GARNL3-213ENST00000464616 FOXN1O15353 648 aa4.53□□□□□ -1.68
GARNL3-213ENST00000464616 DNAJC8O75937 253 aaPredicted RBP4.53□□□□□ -1.68
GARNL3-213ENST00000464616 ASMTLO95671 621 aa4.53□□□□□ -1.68
GARNL3-213ENST00000464616 GYPEP15421 78 aa4.53□□□□□ -1.68
GARNL3-213ENST00000464616 BMP5P22003 454 aa4.53□□□□□ -1.68
GARNL3-213ENST00000464616 SLC25A3Q00325 362 aa4.53□□□□□ -1.68
GARNL3-213ENST00000464616 MYBPC3Q14896 1274 aa4.53□□□□□ -1.68
GARNL3-213ENST00000464616 DPY19L2P1Q6NXN4 242 aa4.53□□□□□ -1.68
GARNL3-213ENST00000464616 ESPNLQ6ZVH7 1005 aa4.53□□□□□ -1.68
GARNL3-213ENST00000464616 APBB1IPQ7Z5R6 666 aaPredicted RBP4.53□□□□□ -1.68
GARNL3-213ENST00000464616 OSBPL6Q9BZF3 934 aa4.53□□□□□ -1.68
GARNL3-213ENST00000464616 ZSWIM4Q9H7M6 989 aa4.53□□□□□ -1.68
GARNL3-213ENST00000464616 CYP4F11Q9HBI6 524 aa4.53□□□□□ -1.68
GARNL3-213ENST00000464616 OXSMQ9NWU1 459 aa4.53□□□□□ -1.68
GARNL3-213ENST00000464616 KCNG1Q9UIX4 513 aa4.53□□□□□ -1.68
GARNL3-213ENST00000464616 USP18Q9UMW8 372 aa4.53□□□□□ -1.68
GARNL3-213ENST00000464616 A0A0A6YYJ9 748 aa4.52□□□□□ -1.69
GARNL3-213ENST00000464616 MTSS1O43312 755 aa4.52□□□□□ -1.69
GARNL3-213ENST00000464616 NRP2O60462 931 aa4.52□□□□□ -1.69
GARNL3-213ENST00000464616 OPHN1O60890 802 aa4.52□□□□□ -1.69
GARNL3-213ENST00000464616 ALDH1A2O94788 518 aa4.52□□□□□ -1.69
GARNL3-213ENST00000464616 NUDT3O95989 172 aa4.52□□□□□ -1.69
GARNL3-213ENST00000464616 GCP02774 474 aa4.52□□□□□ -1.69
GARNL3-213ENST00000464616 HMGB1P09429 215 aaKnown RBP4.52□□□□□ -1.69
GARNL3-213ENST00000464616 HSP90B1P14625 803 aaKnown RBP4.52□□□□□ -1.69
GARNL3-213ENST00000464616 NCLP19338 710 aaKnown RBP4.52□□□□□ -1.69
GARNL3-213ENST00000464616 NRG3P56975 720 aa4.52□□□□□ -1.69
GARNL3-213ENST00000464616 DCAF17Q5H9S7 520 aaPredicted RBP4.52□□□□□ -1.69
GARNL3-213ENST00000464616 LMBR1LQ6UX01 489 aa4.52□□□□□ -1.69
GARNL3-213ENST00000464616 FAM83AQ86UY5 434 aa4.52□□□□□ -1.69
GARNL3-213ENST00000464616 GLB1L3Q8NCI6 653 aaPredicted RBP4.52□□□□□ -1.69
GARNL3-213ENST00000464616 SH3TC2Q8TF17 1288 aa4.52□□□□□ -1.69
GARNL3-213ENST00000464616 GPRC5BQ9NZH0 403 aa4.52□□□□□ -1.69
GARNL3-213ENST00000464616 PCDHB6Q9Y5E3 794 aa4.52□□□□□ -1.69
GARNL3-213ENST00000464616 MYPNQ86TC9 1320 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 PPP1R12AO14974 1030 aaPredicted RBP4.51□□□□□ -1.69
GARNL3-213ENST00000464616 KPNA6O60684 536 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 RAB11FIP3O75154 756 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 ITGB1P05556 798 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 LAG3P18627 525 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 KPNA1P52294 538 aaPredicted RBP4.51□□□□□ -1.69
GARNL3-213ENST00000464616 RABGGTBP53611 331 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 ADAM8P78325 824 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 DUSP2Q05923 314 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 PABPC4Q13310 644 aaKnown RBP eCLIP4.51□□□□□ -1.69
GARNL3-213ENST00000464616 TCEA2Q15560 299 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 CCDC144BQ3MJ40 725 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 MRGPREQ86SM8 312 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 ZNF575Q86XF7 245 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 RPUSD2Q8IZ73 545 aaKnown RBP4.51□□□□□ -1.69
GARNL3-213ENST00000464616 CDYL2Q8N8U2 506 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 AGAP2Q99490 1192 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 KRTAP17-1Q9BYP8 105 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 RIOX1Q9H6W3 641 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 ING3Q9NXR8 418 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 ZNHIT2Q9UHR6 403 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 FZD1Q9UP38 647 aa4.51□□□□□ -1.69
GARNL3-213ENST00000464616 KLRG2A4D1S0 409 aaPredicted RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms