RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 TCERG1LQ5VWI1 586 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 CDCA2Q69YH5 1023 aaPredicted RBP7.87□□□□□ -1.15
USP48-206ENST00000464577 GJB7Q6PEY0 223 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 BARGINQ6ZT62 677 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 C15orf52Q6ZUT6 534 aaKnown RBP7.87□□□□□ -1.15
USP48-206ENST00000464577 ASRGL1Q7L266 308 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 GLYCTKQ8IVS8 523 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 UBL4BQ8N7F7 174 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 PRELID2Q8N945 189 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 MORC4Q8TE76 937 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 ALG3Q92685 438 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 ART4Q93070 314 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 THOC1Q96FV9 657 aaKnown RBP7.87□□□□□ -1.15
USP48-206ENST00000464577 ZNF570Q96NI8 536 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 REEP2Q9BRK0 252 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 MKNK1Q9BUB5 465 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 MTFR1LQ9H019 292 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 SEMA4AQ9H3S1 761 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 MTMR4Q9NYA4 1195 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 ARL2BPQ9Y2Y0 163 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 POTEFA5A3E0 1075 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 TBX3O15119 743 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 EIF3DO15371 548 aaKnown RBP eCLIP7.87□□□□□ -1.15
USP48-206ENST00000464577 SMNDC1O75940 238 aaKnown RBP eCLIP7.87□□□□□ -1.15
USP48-206ENST00000464577 KRT13P13646 458 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 CCNB1P14635 433 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 LACTBP83111 547 aaPredicted RBP7.87□□□□□ -1.15
USP48-206ENST00000464577 CCDC15Q0P6D6 951 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 KIF22Q14807 665 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 GRIK5Q16478 980 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 POTEEQ6S8J3 1075 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 BICDL1Q6ZP65 573 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 EXOC3L1Q86VI1 746 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 KCTD17Q8N5Z5 321 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 C12orf50Q8NA57 414 aaPredicted RBP7.87□□□□□ -1.15
USP48-206ENST00000464577 GJA10Q969M2 543 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 KLHL29Q96CT2 875 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 C18orf8Q96DM3 657 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 ARHGEF26Q96DR7 871 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 SERPINB12Q96P63 405 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 RPS6KC1Q96S38 1066 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 ZSWIM1Q9BR11 485 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 ZHX3Q9H4I2 956 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 PSTPIP2Q9H939 334 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 RXFP1Q9HBX9 757 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 PRKAG3Q9UGI9 489 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 CORO1CQ9ULV4 474 aaPredicted RBP7.87□□□□□ -1.15
USP48-206ENST00000464577 L3MBTL1Q9Y468 752 aa7.87□□□□□ -1.15
USP48-206ENST00000464577 FOCADQ5VW36 1801 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 SMIM23A6NLE4 172 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 TTLL1O95922 423 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 GAP43P17677 238 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 TNFAIP3P21580 790 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 RPA1P27694 616 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 RFC4P35249 363 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 COPB2P35606 906 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 PSMC2P35998 433 aaKnown RBP7.86□□□□□ -1.15
USP48-206ENST00000464577 MSH2P43246 934 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 IFNAR2P48551 515 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 CASP4P49662 377 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 SPIRE1Q08AE8 756 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 ZNF211Q13398 564 aaPredicted RBP7.86□□□□□ -1.15
USP48-206ENST00000464577 DRAP1Q14919 205 aaPredicted RBP7.86□□□□□ -1.15
USP48-206ENST00000464577 SLC15A2Q16348 729 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 SEL1L2Q5TEA6 688 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 RNF43Q68DV7 783 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 CHADLQ6NUI6 762 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 TTC27Q6P3X3 843 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 EP400NLQ6ZTU2 488 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 ZNF804AQ7Z570 1209 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 SPATA21Q7Z572 469 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 FAM186BQ8IYM0 893 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 ADGRF4Q8IZF3 695 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 ARMC2Q8NEN0 867 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 CKAP2Q8WWK9 683 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 VTI1AQ96AJ9 217 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 FAM163AQ96GL9 167 aaPredicted RBP7.86□□□□□ -1.15
USP48-206ENST00000464577 TRIM7Q9C029 511 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 GPR88Q9GZN0 384 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 OLFML3Q9NRN5 406 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 FGFR1OP2Q9NVK5 253 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 DNAJC12Q9UKB3 198 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 COG5Q9UP83 839 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 DNM3Q9UQ16 869 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 UBE4BO95155 1302 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 PASKQ96RG2 1323 aa7.86□□□□□ -1.15
USP48-206ENST00000464577 TCP11X1B4DZS4 312 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 ZBTB5O15062 677 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 DIAPH2O60879 1101 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 TBCAO75347 108 aaKnown RBP7.85□□□□□ -1.15
USP48-206ENST00000464577 TCEA3O75764 348 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 MTA2O94776 668 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 KRT16P08779 473 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 POTEJP0CG39 1038 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 ABCB4P21439 1286 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 FGFR4P22455 802 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 PDE6BP35913 854 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 FMO5P49326 533 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 RHBDL3P58872 404 aa7.85□□□□□ -1.15
USP48-206ENST00000464577 ATP11AP98196 1134 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms