RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 NAPAP54920 295 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 POLR2FP61218 127 aaKnown RBP7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 CCDC15Q0P6D6 951 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 PPP2R5AQ15172 486 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 CALCRLQ16602 461 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 TXNRD1Q16881 649 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 INF2Q27J81 1249 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 SLC27A3Q5K4L6 730 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 LRRC55Q6ZSA7 311 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 PIGWQ7Z7B1 504 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 SLFN11Q7Z7L1 901 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 ZNF444Q8N0Y2 327 aaPredicted RBP7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 REXO1Q8N1G1 1221 aaKnown RBP7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 UBL4BQ8N7F7 174 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 KIAA0895Q8NCT3 520 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 SH3TC2Q8TF17 1288 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 DYDC1Q8WWB3 177 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 TBC1D31Q96DN5 1066 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 MS4A14Q96JA4 679 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 PSMB7Q99436 277 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 PLVAPQ9BX97 442 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 SLC39A2Q9NP94 309 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 RAB6BQ9NRW1 208 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 USP40Q9NVE5 1235 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 MTUS1Q9ULD2 1270 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 TFR2Q9UP52 801 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 TACC3Q9Y6A5 838 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 COL1A1P02452 1464 aaPredicted RBP7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 C10orf71Q711Q0 1435 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 AFF2P51816 1311 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 SPATA31A3Q5VYP0 1347 aa7.78□□□□□ -1.16
CLSTN1-204ENST00000464286 TNRC6CQ9HCJ0 1690 aaKnown RBP7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 ESYT3A0FGR9 886 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 SPATA31C2B4DYI2 1134 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 USP17L12C9JPN9 530 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 USP17L21D6R901 530 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 DNM1LO00429 736 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 SLC16A3O15427 465 aaKnown RBP7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 MARCH6O60337 910 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 HIP1RO75146 1068 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 RTN2O75298 545 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 BAG3O95817 575 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 IL2RAP01589 272 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 AFPP02771 609 aaKnown RBP7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 LDHCP07864 332 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 VIMP08670 466 aaKnown RBP7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 NEFHP12036 1026 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 NQO1P15559 274 aaKnown RBP7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 STAT1P42224 750 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 ABL2P42684 1182 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 SSR1P43307 286 aaKnown RBP7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 RWDD2BP57060 319 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 PTENP60484 403 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 DR1Q01658 176 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 CAV1Q03135 178 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 GRIK3Q13003 919 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 SETDB1Q15047 1291 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 TSNAXIP1Q2TAA8 658 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 LETM2Q2VYF4 491 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 C11orf91Q3C1V1 193 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 SPDYAQ5MJ70 313 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 FAM26FQ5R3K3 315 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 CAPRIN2Q6IMN6 1127 aaKnown RBP7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 MFSD5Q6N075 450 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 TRMT10CQ7L0Y3 403 aaKnown RBP7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 TRIM59Q8IWR1 403 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 DNAJC10Q8IXB1 793 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 ANKRD13CQ8N6S4 541 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 SDR42E1Q8WUS8 393 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 MAIP1Q8WWC4 291 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 CNKSR1Q969H4 720 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 SHISA4Q96DD7 197 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 SELENOSQ9BQE4 189 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 ERP44Q9BS26 406 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 ANKRD2Q9GZV1 360 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 MKNK2Q9HBH9 465 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 BSDC1Q9NW68 430 aaPredicted RBP7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 ARL2BPQ9Y2Y0 163 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 DYRK1BQ9Y463 629 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 USP15Q9Y4E8 981 aaPredicted RBP7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 HRH3Q9Y5N1 445 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 BAZ2AQ9UIF9 1905 aaKnown RBP7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 TOGARAM1Q9Y4F4 1720 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 CACNA1SQ13698 1873 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 NCANO14594 1321 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 PITPNM2Q9BZ72 1349 aa7.77□□□□□ -1.17
CLSTN1-204ENST00000464286 SHANK3Q9BYB0 1731 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 hCG_1642624A0A1W2PR95 340 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 CCDC189A1A4V9 331 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 PALM3A6NDB9 673 aaPredicted RBP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 SMCO2A6NFE2 343 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 DAPK3O43293 454 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 ADAMTS2O95450 1211 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 ANP32DO95626 131 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 MYCP01106 439 aaPredicted RBP7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 CLTAP09496 248 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 TMEM253P0C7T8 217 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 TSPY3P0CV98 308 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 TSPY8P0CW00 308 aa7.76□□□□□ -1.17
CLSTN1-204ENST00000464286 SLURP2P0DP57 97 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms