RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 ZNF512Q96ME7 567 aaPredicted RBP6.08□□□□□ -1.44
ITGB1-208ENST00000464001 ZMAT4Q9H898 229 aa6.08□□□□□ -1.44
ITGB1-208ENST00000464001 SLC2A4RGQ9NR83 387 aa6.08□□□□□ -1.44
ITGB1-208ENST00000464001 KPNA6O60684 536 aa6.07□□□□□ -1.44
ITGB1-208ENST00000464001 POU3F2P20265 443 aaPredicted RBP6.07□□□□□ -1.44
ITGB1-208ENST00000464001 SPIDRQ14159 915 aa6.07□□□□□ -1.44
ITGB1-208ENST00000464001 LRRC32Q14392 662 aa6.07□□□□□ -1.44
ITGB1-208ENST00000464001 UNQ6494/PRO21346Q6UXR6 183 aa6.07□□□□□ -1.44
ITGB1-208ENST00000464001 NXPE1Q8N323 547 aa6.07□□□□□ -1.44
ITGB1-208ENST00000464001 ATXN2LQ8WWM7 1075 aaKnown RBP6.07□□□□□ -1.44
ITGB1-208ENST00000464001 LARP4BQ92615 738 aaKnown RBP6.07□□□□□ -1.44
ITGB1-208ENST00000464001 IKZF4Q9H2S9 585 aa6.07□□□□□ -1.44
ITGB1-208ENST00000464001 H2AFY2Q9P0M6 372 aaPredicted RBP6.07□□□□□ -1.44
ITGB1-208ENST00000464001 USP36Q9P275 1121 aaKnown RBP6.07□□□□□ -1.44
ITGB1-208ENST00000464001 C11orf21Q9P2W6 132 aa6.07□□□□□ -1.44
ITGB1-208ENST00000464001 CD2APQ9Y5K6 639 aa6.07□□□□□ -1.44
ITGB1-208ENST00000464001 MYPNQ86TC9 1320 aa6.06□□□□□ -1.44
ITGB1-208ENST00000464001 A0A087X1B8 175 aa6.06□□□□□ -1.44
ITGB1-208ENST00000464001 DSG1Q02413 1049 aa6.06□□□□□ -1.44
ITGB1-208ENST00000464001 C21orf62-AS1Q17RA5 79 aa6.06□□□□□ -1.44
ITGB1-208ENST00000464001 ESPNLQ6ZVH7 1005 aa6.06□□□□□ -1.44
ITGB1-208ENST00000464001 C16orf86Q6ZW13 317 aa6.06□□□□□ -1.44
ITGB1-208ENST00000464001 LRRTM3Q86VH5 581 aa6.06□□□□□ -1.44
ITGB1-208ENST00000464001 ELOA2Q8IYF1 753 aaPredicted RBP6.06□□□□□ -1.44
ITGB1-208ENST00000464001 MDGA1Q8NFP4 955 aa6.06□□□□□ -1.44
ITGB1-208ENST00000464001 CHTF18Q8WVB6 975 aa6.06□□□□□ -1.44
ITGB1-208ENST00000464001 APPBP2Q92624 585 aa6.06□□□□□ -1.44
ITGB1-208ENST00000464001 RNPC3Q96LT9 517 aaKnown RBP6.06□□□□□ -1.44
ITGB1-208ENST00000464001 MNTQ99583 582 aa6.06□□□□□ -1.44
ITGB1-208ENST00000464001 PRRX2Q99811 253 aa6.06□□□□□ -1.44
ITGB1-208ENST00000464001 THG1LQ9NWX6 298 aaKnown RBP6.06□□□□□ -1.44
ITGB1-208ENST00000464001 A0A0A6YYK5 440 aaPredicted RBP6.05□□□□□ -1.44
ITGB1-208ENST00000464001 ST20-MTHFSA0A0A6YYL1 179 aa6.05□□□□□ -1.44
ITGB1-208ENST00000464001 NRP1O14786 923 aa6.05□□□□□ -1.44
ITGB1-208ENST00000464001 GNAT2P19087 354 aa6.05□□□□□ -1.44
ITGB1-208ENST00000464001 KPNA1P52294 538 aaPredicted RBP6.05□□□□□ -1.44
ITGB1-208ENST00000464001 RABGGTBP53611 331 aa6.05□□□□□ -1.44
ITGB1-208ENST00000464001 INHBEP58166 350 aa6.05□□□□□ -1.44
ITGB1-208ENST00000464001 SLC25A3Q00325 362 aa6.05□□□□□ -1.44
ITGB1-208ENST00000464001 TOB2Q14106 344 aaPredicted RBP6.05□□□□□ -1.44
ITGB1-208ENST00000464001 SART3Q15020 963 aaKnown RBP6.05□□□□□ -1.44
ITGB1-208ENST00000464001 SMN1Q16637 294 aaKnown RBP6.05□□□□□ -1.44
ITGB1-208ENST00000464001 CNNM4Q6P4Q7 775 aa6.05□□□□□ -1.44
ITGB1-208ENST00000464001 PPP1R14CQ8TAE6 165 aa6.05□□□□□ -1.44
ITGB1-208ENST00000464001 ST8SIA2Q92186 375 aa6.05□□□□□ -1.44
ITGB1-208ENST00000464001 NINJ1Q92982 152 aa6.05□□□□□ -1.44
ITGB1-208ENST00000464001 FERMT2Q96AC1 680 aa6.05□□□□□ -1.44
ITGB1-208ENST00000464001 SOX7Q9BT81 388 aa6.05□□□□□ -1.44
ITGB1-208ENST00000464001 MTFR1LQ9H019 292 aa6.05□□□□□ -1.44
ITGB1-208ENST00000464001 PIF1Q9H611 641 aa6.05□□□□□ -1.44
ITGB1-208ENST00000464001 PCDHB6Q9Y5E3 794 aa6.05□□□□□ -1.44
ITGB1-208ENST00000464001 KLRG2A4D1S0 409 aaPredicted RBP6.04□□□□□ -1.44
ITGB1-208ENST00000464001 ZNF891A8MT65 544 aaPredicted RBP6.04□□□□□ -1.44
ITGB1-208ENST00000464001 PCDH8O95206 1070 aa6.04□□□□□ -1.44
ITGB1-208ENST00000464001 GAAP10253 952 aa6.04□□□□□ -1.44
ITGB1-208ENST00000464001 PTGS2P35354 604 aa6.04□□□□□ -1.44
ITGB1-208ENST00000464001 OCRLQ01968 901 aa6.04□□□□□ -1.44
ITGB1-208ENST00000464001 RABL3Q5HYI8 236 aa6.04□□□□□ -1.44
ITGB1-208ENST00000464001 GPR158Q5T848 1215 aa6.04□□□□□ -1.44
ITGB1-208ENST00000464001 HTR3DQ70Z44 454 aa6.04□□□□□ -1.44
ITGB1-208ENST00000464001 APBB1IPQ7Z5R6 666 aaPredicted RBP6.04□□□□□ -1.44
ITGB1-208ENST00000464001 MRGPRGQ86SM5 289 aa6.04□□□□□ -1.44
ITGB1-208ENST00000464001 LDLRAD3Q86YD5 345 aa6.04□□□□□ -1.44
ITGB1-208ENST00000464001 ULK2Q8IYT8 1036 aa6.04□□□□□ -1.44
ITGB1-208ENST00000464001 UNC5BQ8IZJ1 945 aa6.04□□□□□ -1.44
ITGB1-208ENST00000464001 AHI1Q8N157 1196 aa6.04□□□□□ -1.44
ITGB1-208ENST00000464001 MB21D1Q8N884 522 aa6.04□□□□□ -1.44
ITGB1-208ENST00000464001 CDYL2Q8N8U2 506 aa6.04□□□□□ -1.44
ITGB1-208ENST00000464001 MSRAQ9UJ68 235 aa6.04□□□□□ -1.44
ITGB1-208ENST00000464001 ELL2O00472 640 aaPredicted RBP6.03□□□□□ -1.44
ITGB1-208ENST00000464001 RPS6KA4O75676 772 aa6.03□□□□□ -1.44
ITGB1-208ENST00000464001 XPAP23025 273 aaPredicted RBP6.03□□□□□ -1.44
ITGB1-208ENST00000464001 SCNN1BP51168 640 aa6.03□□□□□ -1.44
ITGB1-208ENST00000464001 ZNF627Q7L945 461 aa6.03□□□□□ -1.44
ITGB1-208ENST00000464001 PPM1KQ8N3J5 372 aa6.03□□□□□ -1.44
ITGB1-208ENST00000464001 SLC25A43Q8WUT9 341 aaPredicted RBP6.03□□□□□ -1.44
ITGB1-208ENST00000464001 HAS1Q92839 578 aa6.03□□□□□ -1.44
ITGB1-208ENST00000464001 PGBD4Q96DM1 585 aa6.03□□□□□ -1.44
ITGB1-208ENST00000464001 EPC1Q9H2F5 836 aa6.03□□□□□ -1.44
ITGB1-208ENST00000464001 NRDE2Q9H7Z3 1164 aa6.03□□□□□ -1.44
ITGB1-208ENST00000464001 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.03□□□□□ -1.44
ITGB1-208ENST00000464001 FANCLQ9NW38 375 aa6.03□□□□□ -1.44
ITGB1-208ENST00000464001 ING3Q9NXR8 418 aa6.03□□□□□ -1.44
ITGB1-208ENST00000464001 GPRC5BQ9NZH0 403 aa6.03□□□□□ -1.44
ITGB1-208ENST00000464001 TMEM191CA6NGB0 347 aa6.02□□□□□ -1.45
ITGB1-208ENST00000464001 HOXA3O43365 443 aaPredicted RBP6.02□□□□□ -1.45
ITGB1-208ENST00000464001 TGM5O43548 720 aa6.02□□□□□ -1.45
ITGB1-208ENST00000464001 NRP2O60462 931 aa6.02□□□□□ -1.45
ITGB1-208ENST00000464001 FAM20BO75063 409 aa6.02□□□□□ -1.45
ITGB1-208ENST00000464001 ALDH1A2O94788 518 aa6.02□□□□□ -1.45
ITGB1-208ENST00000464001 LSP1P33241 339 aa6.02□□□□□ -1.45
ITGB1-208ENST00000464001 GPR15P49685 360 aa6.02□□□□□ -1.45
ITGB1-208ENST00000464001 DCAF17Q5H9S7 520 aaPredicted RBP6.02□□□□□ -1.45
ITGB1-208ENST00000464001 NAIF1Q69YI7 327 aaPredicted RBP6.02□□□□□ -1.45
ITGB1-208ENST00000464001 NIM1KQ8IY84 436 aa6.02□□□□□ -1.45
ITGB1-208ENST00000464001 SMC1BQ8NDV3 1235 aa6.02□□□□□ -1.45
ITGB1-208ENST00000464001 ZNF496Q96IT1 587 aaPredicted RBP6.02□□□□□ -1.45
ITGB1-208ENST00000464001 TRPS1Q9UHF7 1281 aa6.02□□□□□ -1.45
ITGB1-208ENST00000464001 USP18Q9UMW8 372 aa6.02□□□□□ -1.45
ITGB1-208ENST00000464001 FAM83GA6ND36 823 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms