RNA–Protein interactions for RNA: ENST00000463914.1

TMEM54-203, Transcript of transmembrane protein 54, humanhuman

TSL 5

Gene TMEM54, Length 606 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-203ENST00000463914 AGXT2Q9BYV1 514 aa11.51□□□□□ -0.57
TMEM54-203ENST00000463914 SSBP05455 408 aaKnown RBP eCLIP11.5□□□□□ -0.57
TMEM54-203ENST00000463914 IFNAR1P17181 557 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 RPS6KB1P23443 525 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 HSPA4P34932 840 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 USP11P51784 963 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 AFF1P51825 1210 aaKnown RBP11.5□□□□□ -0.57
TMEM54-203ENST00000463914 POLGP54098 1239 aaPredicted RBP11.5□□□□□ -0.57
TMEM54-203ENST00000463914 RNASELQ05823 741 aaKnown RBP11.5□□□□□ -0.57
TMEM54-203ENST00000463914 BMS1Q14692 1282 aaKnown RBP11.5□□□□□ -0.57
TMEM54-203ENST00000463914 PTPN14Q15678 1187 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 NOMO2Q5JPE7 1267 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 CWF19L1Q69YN2 538 aaKnown RBP11.5□□□□□ -0.57
TMEM54-203ENST00000463914 CATSPER4Q7RTX7 472 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 DDX53Q86TM3 631 aaKnown RBP11.5□□□□□ -0.57
TMEM54-203ENST00000463914 ZNF410Q86VK4 478 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 RHPN2Q8IUC4 686 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 ZDHHC14Q8IZN3 488 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 TMEM87AQ8NBN3 555 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 RDM1Q8NG50 284 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 ETNPPLQ8TBG4 499 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 TRAIPQ9BWF2 469 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 IRF2BPLQ9H1B7 796 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 CHST12Q9NRB3 414 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 SUCLA2Q9P2R7 463 aaPredicted RBP11.5□□□□□ -0.57
TMEM54-203ENST00000463914 IRAK3Q9Y616 596 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 DOCK8Q8NF50 2099 aa11.5□□□□□ -0.57
TMEM54-203ENST00000463914 PRR23AA6NEV1 266 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 EML1O00423 815 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 OFD1O75665 1012 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 PDIA3P30101 505 aaKnown RBP11.49□□□□□ -0.57
TMEM54-203ENST00000463914 RAB27AP51159 221 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 NPY5RQ15761 445 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 ATAT1Q5SQI0 421 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 ASTLQ6HA08 431 aaPredicted RBP11.49□□□□□ -0.57
TMEM54-203ENST00000463914 AGMOQ6ZNB7 445 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 ANO5Q75V66 913 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 CABP7Q86V35 215 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 ZNF280BQ86YH2 543 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 AIFM3Q96NN9 605 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 MFSD1Q9H3U5 465 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 SFXN1Q9H9B4 322 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 IFT122Q9HBG6 1241 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 BMP2KQ9NSY1 1161 aaPredicted RBP11.49□□□□□ -0.57
TMEM54-203ENST00000463914 AGPAT5Q9NUQ2 364 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 PCDHA4Q9UN74 947 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 USTQ9Y2C2 406 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 PCDHB2Q9Y5E7 798 aa11.49□□□□□ -0.57
TMEM54-203ENST00000463914 RIF1Q5UIP0 2472 aaKnown RBP11.49□□□□□ -0.57
TMEM54-203ENST00000463914 TDRD15B5MCY1 1934 aaKnown RBP11.48□□□□□ -0.57
TMEM54-203ENST00000463914 SPDYE4A6NLX3 237 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 DDX11L8A8MPP1 907 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 PROB1E7EW31 1015 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 M0R2N6 131 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 SLC37A4O43826 429 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 ZNF623O75123 536 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 MAFO75444 373 aaPredicted RBP11.48□□□□□ -0.57
TMEM54-203ENST00000463914 DDHD2O94830 711 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 CNPP09543 421 aaKnown RBP11.48□□□□□ -0.57
TMEM54-203ENST00000463914 SKIP12755 728 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 DNM2P50570 870 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 NUBP1P53384 320 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 NPEPPSP55786 919 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 GIT2Q14161 759 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 Q4G0T1 1027 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 CCDC149Q6ZUS6 474 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 CENPQQ7L2Z9 268 aaPredicted RBP11.48□□□□□ -0.57
TMEM54-203ENST00000463914 GPR149Q86SP6 731 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 FBXL16Q8N461 479 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 ZNF579Q8NAF0 562 aaKnown RBP11.48□□□□□ -0.57
TMEM54-203ENST00000463914 FLCNQ8NFG4 579 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 MBOAT7Q96N66 472 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 KLHL5Q96PQ7 755 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 MINDY3Q9H8M7 445 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 SH3GLB2Q9NR46 395 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 CYP26B1Q9NR63 512 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 WRAP73Q9P2S5 460 aaPredicted RBP11.48□□□□□ -0.57
TMEM54-203ENST00000463914 COL4A3BPQ9Y5P4 624 aa11.48□□□□□ -0.57
TMEM54-203ENST00000463914 ZFHX2Q9C0A1 2572 aaPredicted RBP11.48□□□□□ -0.57
TMEM54-203ENST00000463914 CYP3A7-CYP3A51PA0A087WV96 503 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 CYP3A7P24462 503 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 NBL1P41271 181 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 CLCN4P51793 760 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 EVCP57679 992 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 PSMC5P62195 406 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 TOB2Q14106 344 aaPredicted RBP11.47□□□□□ -0.57
TMEM54-203ENST00000463914 INF2Q27J81 1249 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 UBXN11Q5T124 520 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 FRMD5Q7Z6J6 570 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 PPFIBP1Q86W92 1011 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 TRIM22Q8IYM9 498 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 BLIDQ8IZY5 108 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 PLCD3Q8N3E9 789 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 URGCPQ8TCY9 931 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 RSPH1Q8WYR4 309 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 TMEM143Q96AN5 459 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 LARP6Q9BRS8 491 aaKnown RBP11.47□□□□□ -0.57
TMEM54-203ENST00000463914 C22orf23Q9BZE7 217 aa11.47□□□□□ -0.57
TMEM54-203ENST00000463914 INO80BQ9C086 356 aaPredicted RBP11.47□□□□□ -0.57
TMEM54-203ENST00000463914 RSAD1Q9HA92 442 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms