RNA–Protein interactions for RNA: ENST00000463908.2

LMNB1-204, Transcript of lamin B1, humanhuman

TSL 4

Gene LMNB1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-204ENST00000463908 ZNF131P52739 623 aa20.93■□□□□ 0.94
LMNB1-204ENST00000463908 AMHR2Q16671 573 aa20.93■□□□□ 0.94
LMNB1-204ENST00000463908 ODR4Q5SWX8 454 aa20.93■□□□□ 0.94
LMNB1-204ENST00000463908 TMCO2Q7Z6W1 182 aaPredicted RBP20.93■□□□□ 0.94
LMNB1-204ENST00000463908 MRPS27Q92552 414 aaKnown RBP20.93■□□□□ 0.94
LMNB1-204ENST00000463908 LRCH3Q96II8 777 aa20.93■□□□□ 0.94
LMNB1-204ENST00000463908 IFT74Q96LB3 600 aa20.93■□□□□ 0.94
LMNB1-204ENST00000463908 FTHL17Q9BXU8 183 aa20.93■□□□□ 0.94
LMNB1-204ENST00000463908 TSPYL2Q9H2G4 693 aaPredicted RBP20.93■□□□□ 0.94
LMNB1-204ENST00000463908 FZD8Q9H461 694 aa20.93■□□□□ 0.94
LMNB1-204ENST00000463908 C17orf75Q9HAS0 396 aa20.93■□□□□ 0.94
LMNB1-204ENST00000463908 ODF2LQ9ULJ1 636 aa20.93■□□□□ 0.94
LMNB1-204ENST00000463908 INO80B-WBP1J3KQ70 363 aa20.92■□□□□ 0.94
LMNB1-204ENST00000463908 EFCAB14O75071 495 aa20.92■□□□□ 0.94
LMNB1-204ENST00000463908 GADD45BO75293 160 aaPredicted RBP20.92■□□□□ 0.94
LMNB1-204ENST00000463908 KRT18P05783 430 aaKnown RBP20.92■□□□□ 0.94
LMNB1-204ENST00000463908 PPP2R5AQ15172 486 aa20.92■□□□□ 0.94
LMNB1-204ENST00000463908 CLEC17AQ6ZS10 378 aa20.92■□□□□ 0.94
LMNB1-204ENST00000463908 CATSPER4Q7RTX7 472 aa20.92■□□□□ 0.94
LMNB1-204ENST00000463908 CRIPAKQ8N1N5 446 aa20.92■□□□□ 0.94
LMNB1-204ENST00000463908 TMEM87AQ8NBN3 555 aa20.92■□□□□ 0.94
LMNB1-204ENST00000463908 SLC17A8Q8NDX2 589 aa20.92■□□□□ 0.94
LMNB1-204ENST00000463908 ADAM2Q99965 735 aa20.92■□□□□ 0.94
LMNB1-204ENST00000463908 MTIF3Q9H2K0 278 aaKnown RBP20.92■□□□□ 0.94
LMNB1-204ENST00000463908 TNMDQ9H2S6 317 aa20.92■□□□□ 0.94
LMNB1-204ENST00000463908 RGS18Q9NS28 235 aa20.92■□□□□ 0.94
LMNB1-204ENST00000463908 CCDC169A6NNP5 214 aa20.91■□□□□ 0.94
LMNB1-204ENST00000463908 DLL1O00548 723 aa20.91■□□□□ 0.94
LMNB1-204ENST00000463908 SLFN14P0C7P3 912 aa20.91■□□□□ 0.94
LMNB1-204ENST00000463908 SFPQP23246 707 aaKnown RBP eCLIP20.91■□□□□ 0.941e-7■■■■■ 32.9
LMNB1-204ENST00000463908 SYKP43405 635 aa20.91■□□□□ 0.94
LMNB1-204ENST00000463908 FAM189BP81408 668 aa20.91■□□□□ 0.94
LMNB1-204ENST00000463908 LRIT3Q3SXY7 679 aa20.91■□□□□ 0.94
LMNB1-204ENST00000463908 FAM43BQ6ZT52 329 aaPredicted RBP20.91■□□□□ 0.94
LMNB1-204ENST00000463908 UNC80Q8N2C7 3258 aa20.91■□□□□ 0.94
LMNB1-204ENST00000463908 PHOSPHO2Q8TCD6 241 aa20.91■□□□□ 0.94
LMNB1-204ENST00000463908 SPIRE2Q8WWL2 714 aa20.91■□□□□ 0.94
LMNB1-204ENST00000463908 CCDC113Q9H0I3 377 aa20.91■□□□□ 0.94
LMNB1-204ENST00000463908 ARHGAP28Q9P2N2 729 aa20.91■□□□□ 0.94
LMNB1-204ENST00000463908 TTLL13PA6NNM8 815 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 SLC16A4O15374 487 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 TSPAN1O60635 241 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 EDN1P05305 212 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 ATP2A2P16615 1042 aaKnown RBP20.9■□□□□ 0.94
LMNB1-204ENST00000463908 CASP1P29466 404 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 SNW1Q13573 536 aaKnown RBP20.9■□□□□ 0.94
LMNB1-204ENST00000463908 TAS1R3Q7RTX0 852 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 GRAMD1CQ8IYS0 662 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 MYCT1Q8N699 235 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 ENGASEQ8NFI3 743 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 DEPTORQ8TB45 409 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 TOP1MTQ969P6 601 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 PAGE5Q96GU1 130 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 FIZ1Q96SL8 496 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 C7orf25Q9BPX7 421 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 PYM1Q9BRP8 204 aaKnown RBP20.9■□□□□ 0.94
LMNB1-204ENST00000463908 TRIM9Q9C026 710 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 C2orf40Q9H1Z8 148 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 KMT5AQ9NQR1 393 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 CHST12Q9NRB3 414 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 AGPAT5Q9NUQ2 364 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 USP20Q9Y2K6 914 aa20.9■□□□□ 0.94
LMNB1-204ENST00000463908 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.89■□□□□ 0.93
LMNB1-204ENST00000463908 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.89■□□□□ 0.93
LMNB1-204ENST00000463908 FRMD3A2A2Y4 597 aa20.89■□□□□ 0.93
LMNB1-204ENST00000463908 GOLGA6L4A6NEF3 574 aa20.89■□□□□ 0.93
LMNB1-204ENST00000463908 C9IYK1 514 aa20.89■□□□□ 0.93
LMNB1-204ENST00000463908 B4GALT5O43286 388 aa20.89■□□□□ 0.93
LMNB1-204ENST00000463908 FAM13AO94988 1023 aa20.89■□□□□ 0.93
LMNB1-204ENST00000463908 ZNF202O95125 648 aa20.89■□□□□ 0.93
LMNB1-204ENST00000463908 KCNJ6P48051 423 aa20.89■□□□□ 0.93
LMNB1-204ENST00000463908 DMP1Q13316 513 aaPredicted RBP20.89■□□□□ 0.93
LMNB1-204ENST00000463908 PCBP1Q15365 356 aaKnown RBP eCLIP20.89■□□□□ 0.931e-18■□□□□ 8.3
LMNB1-204ENST00000463908 FAM187BQ17R55 369 aa20.89■□□□□ 0.93
LMNB1-204ENST00000463908 CNNM4Q6P4Q7 775 aa20.89■□□□□ 0.93
LMNB1-204ENST00000463908 PPP4R3CPQ6ZMV5 832 aa20.89■□□□□ 0.93
LMNB1-204ENST00000463908 ZBTB8OSQ8IWT0 167 aa20.89■□□□□ 0.93
LMNB1-204ENST00000463908 FMR1NBQ8N0W7 255 aaPredicted RBP20.89■□□□□ 0.93
LMNB1-204ENST00000463908 TMEM161BQ8NDZ6 487 aa20.89■□□□□ 0.93
LMNB1-204ENST00000463908 SLC9A7Q96T83 725 aa20.89■□□□□ 0.93
LMNB1-204ENST00000463908 PARVGQ9HBI0 331 aa20.89■□□□□ 0.93
LMNB1-204ENST00000463908 LARSQ9P2J5 1176 aaKnown RBP20.89■□□□□ 0.93
LMNB1-204ENST00000463908 USP25Q9UHP3 1055 aa20.89■□□□□ 0.93
LMNB1-204ENST00000463908 DENND3A2RUS2 1198 aa20.88■□□□□ 0.93
LMNB1-204ENST00000463908 AMHP03971 560 aa20.88■□□□□ 0.93
LMNB1-204ENST00000463908 ZSCAN20P17040 1043 aaPredicted RBP20.88■□□□□ 0.93
LMNB1-204ENST00000463908 ARF4P18085 180 aaPredicted RBP20.88■□□□□ 0.93
LMNB1-204ENST00000463908 AFMP43652 599 aa20.88■□□□□ 0.93
LMNB1-204ENST00000463908 EFNA5P52803 228 aa20.88■□□□□ 0.93
LMNB1-204ENST00000463908 RABGGTBP53611 331 aa20.88■□□□□ 0.93
LMNB1-204ENST00000463908 NCKAP1LP55160 1127 aa20.88■□□□□ 0.93
LMNB1-204ENST00000463908 AMPD3Q01432 767 aa20.88■□□□□ 0.93
LMNB1-204ENST00000463908 CSPP1Q1MSJ5 1256 aa20.88■□□□□ 0.93
LMNB1-204ENST00000463908 UBXN11Q5T124 520 aa20.88■□□□□ 0.93
LMNB1-204ENST00000463908 SLC24A5Q71RS6 500 aa20.88■□□□□ 0.93
LMNB1-204ENST00000463908 HERC6Q8IVU3 1022 aa20.88■□□□□ 0.93
LMNB1-204ENST00000463908 MYOCDQ8IZQ8 938 aa20.88■□□□□ 0.93
LMNB1-204ENST00000463908 CPB2Q96IY4 423 aa20.88■□□□□ 0.93
LMNB1-204ENST00000463908 LRRC27Q9C0I9 530 aa20.88■□□□□ 0.93
LMNB1-204ENST00000463908 BLZF1Q9H2G9 400 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms