RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 FAM105AQ9NUU6 356 aa18.03■□□□□ 0.48
COL1A1-202ENST00000463440 RNF19AQ9NV58 838 aa18.03■□□□□ 0.48
COL1A1-202ENST00000463440 A0A0C4DFX4 3053 aa18.03■□□□□ 0.48
COL1A1-202ENST00000463440 KIAA1671Q9BY89 1806 aa18.02■□□□□ 0.48
COL1A1-202ENST00000463440 INO80B-WBP1J3KQ70 363 aa18.02■□□□□ 0.48
COL1A1-202ENST00000463440 ITGB1P05556 798 aa18.02■□□□□ 0.48
COL1A1-202ENST00000463440 ATF7P17544 494 aaPredicted RBP18.02■□□□□ 0.48
COL1A1-202ENST00000463440 LAG3P18627 525 aa18.02■□□□□ 0.48
COL1A1-202ENST00000463440 GLRA2P23416 452 aa18.02■□□□□ 0.48
COL1A1-202ENST00000463440 PADI6Q6TGC4 694 aa18.02■□□□□ 0.48
COL1A1-202ENST00000463440 MAEAQ7L5Y9 396 aa18.02■□□□□ 0.48
COL1A1-202ENST00000463440 BRAPQ7Z569 592 aa18.02■□□□□ 0.48
COL1A1-202ENST00000463440 KIAA1024Q9UPX6 916 aa18.02■□□□□ 0.48
COL1A1-202ENST00000463440 VPS37CA5D8V6 355 aaPredicted RBP18.01■□□□□ 0.47
COL1A1-202ENST00000463440 ZNF623O75123 536 aa18.01■□□□□ 0.47
COL1A1-202ENST00000463440 CYP11B2P19099 503 aa18.01■□□□□ 0.47
COL1A1-202ENST00000463440 AXLP30530 894 aa18.01■□□□□ 0.47
COL1A1-202ENST00000463440 CLLU1OSQ5K130 101 aa18.01■□□□□ 0.47
COL1A1-202ENST00000463440 COLGALT1Q8NBJ5 622 aa18.01■□□□□ 0.47
COL1A1-202ENST00000463440 SPPL3Q8TCT6 385 aa18.01■□□□□ 0.47
COL1A1-202ENST00000463440 HELQQ8TDG4 1101 aa18.01■□□□□ 0.47
COL1A1-202ENST00000463440 PGBD4Q96DM1 585 aa18.01■□□□□ 0.47
COL1A1-202ENST00000463440 INTS4Q96HW7 963 aaKnown RBP18.01■□□□□ 0.47
COL1A1-202ENST00000463440 COL25A1Q9BXS0 654 aaPredicted RBP18.01■□□□□ 0.47
COL1A1-202ENST00000463440 MRPL9Q9BYD2 267 aaKnown RBP18.01■□□□□ 0.47
COL1A1-202ENST00000463440 NFKBIZQ9BYH8 718 aa18.01■□□□□ 0.47
COL1A1-202ENST00000463440 CWH43Q9H720 699 aa18.01■□□□□ 0.47
COL1A1-202ENST00000463440 GPRC5CQ9NQ84 441 aa18.01■□□□□ 0.47
COL1A1-202ENST00000463440 DDX19AQ9NUU7 478 aaKnown RBP18.01■□□□□ 0.47
COL1A1-202ENST00000463440 LRRIQ4A6NIV6 560 aa18■□□□□ 0.47
COL1A1-202ENST00000463440 K7ELQ4 463 aaPredicted RBP18■□□□□ 0.47
COL1A1-202ENST00000463440 HOXA11P31270 313 aaPredicted RBP18■□□□□ 0.47
COL1A1-202ENST00000463440 TFF2Q03403 129 aa18■□□□□ 0.47
COL1A1-202ENST00000463440 IL17AQ16552 155 aa18■□□□□ 0.47
COL1A1-202ENST00000463440 ECM1Q16610 540 aa18■□□□□ 0.47
COL1A1-202ENST00000463440 TCEAL5Q5H9L2 206 aa18■□□□□ 0.47
COL1A1-202ENST00000463440 ARL6IP4Q66PJ3 421 aaKnown RBP18■□□□□ 0.47
COL1A1-202ENST00000463440 GLB1LQ6UWU2 654 aa18■□□□□ 0.47
COL1A1-202ENST00000463440 THNSL1Q8IYQ7 743 aa18■□□□□ 0.47
COL1A1-202ENST00000463440 BHMT2Q9H2M3 363 aa18■□□□□ 0.47
COL1A1-202ENST00000463440 HCSTQ9UBK5 93 aa18■□□□□ 0.47
COL1A1-202ENST00000463440 DNM3Q9UQ16 869 aa18■□□□□ 0.47
COL1A1-202ENST00000463440 PCDHB2Q9Y5E7 798 aa18■□□□□ 0.47
COL1A1-202ENST00000463440 PP2D1A8MPX8 630 aa17.99■□□□□ 0.47
COL1A1-202ENST00000463440 NCK2O43639 380 aa17.99■□□□□ 0.47
COL1A1-202ENST00000463440 TSPAN1O60635 241 aa17.99■□□□□ 0.47
COL1A1-202ENST00000463440 BMP15O95972 392 aa17.99■□□□□ 0.47
COL1A1-202ENST00000463440 UBE3AQ05086 875 aa17.99■□□□□ 0.47
COL1A1-202ENST00000463440 MBTD1Q05BQ5 628 aa17.99■□□□□ 0.47
COL1A1-202ENST00000463440 NOTUMQ6P988 496 aa17.99■□□□□ 0.47
COL1A1-202ENST00000463440 LRRC55Q6ZSA7 311 aa17.99■□□□□ 0.47
COL1A1-202ENST00000463440 ZBTB8OSQ8IWT0 167 aa17.99■□□□□ 0.47
COL1A1-202ENST00000463440 POF1BQ8WVV4 589 aa17.99■□□□□ 0.47
COL1A1-202ENST00000463440 LPPQ93052 612 aa17.99■□□□□ 0.47
COL1A1-202ENST00000463440 PPP2R3CQ969Q6 453 aa17.99■□□□□ 0.47
COL1A1-202ENST00000463440 CCDC51Q96ER9 411 aa17.99■□□□□ 0.47
COL1A1-202ENST00000463440 ZNF558Q96NG5 402 aa17.99■□□□□ 0.47
COL1A1-202ENST00000463440 UBE2ZQ9H832 354 aaPredicted RBP17.99■□□□□ 0.47
COL1A1-202ENST00000463440 REV3LO60673 3130 aa17.98■□□□□ 0.47
COL1A1-202ENST00000463440 VWA3AA6NCI4 1184 aa17.98■□□□□ 0.47
COL1A1-202ENST00000463440 FGF18O76093 207 aa17.98■□□□□ 0.47
COL1A1-202ENST00000463440 CSPG5O95196 566 aa17.98■□□□□ 0.47
COL1A1-202ENST00000463440 EYA4O95677 639 aa17.98■□□□□ 0.47
COL1A1-202ENST00000463440 CDC25AP30304 524 aa17.98■□□□□ 0.47
COL1A1-202ENST00000463440 PPM1AP35813 382 aa17.98■□□□□ 0.47
COL1A1-202ENST00000463440 PPP2R5AQ15172 486 aa17.98■□□□□ 0.47
COL1A1-202ENST00000463440 LONRF3Q496Y0 759 aa17.98■□□□□ 0.47
COL1A1-202ENST00000463440 KCNT2Q6UVM3 1135 aa17.98■□□□□ 0.47
COL1A1-202ENST00000463440 MRPL10Q7Z7H8 261 aaKnown RBP17.98■□□□□ 0.47
COL1A1-202ENST00000463440 CNNM3Q8NE01 707 aa17.98■□□□□ 0.47
COL1A1-202ENST00000463440 C2orf40Q9H1Z8 148 aa17.98■□□□□ 0.47
COL1A1-202ENST00000463440 MYO7AQ13402 2215 aa17.98■□□□□ 0.47
COL1A1-202ENST00000463440 CNTNAP2Q9UHC6 1331 aa17.98■□□□□ 0.47
COL1A1-202ENST00000463440 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP17.97■□□□□ 0.47
COL1A1-202ENST00000463440 CARNS1A5YM72 827 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 SYT1P21579 422 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 DNAJB1P25685 340 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 CAMK1Q14012 370 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 AMHR2Q16671 573 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 NOMO2Q5JPE7 1267 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 UBXN11Q5T124 520 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 KCTD17Q8N5Z5 321 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 KIFAP3Q92845 792 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 SNX21Q969T3 373 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 CPB2Q96IY4 423 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 IFT74Q96LB3 600 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 MMTAG2Q9BU76 263 aaKnown RBP17.97■□□□□ 0.47
COL1A1-202ENST00000463440 NT5C3AQ9H0P0 336 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 CSRNP2Q9H175 543 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 PRMT7Q9NVM4 692 aaPredicted RBP17.97■□□□□ 0.47
COL1A1-202ENST00000463440 SPG21Q9NZD8 308 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 PUF60Q9UHX1 559 aaKnown RBP17.97■□□□□ 0.47
COL1A1-202ENST00000463440 INPP5FQ9Y2H2 1132 aa17.97■□□□□ 0.47
COL1A1-202ENST00000463440 MEIS3P2A8K0S8 358 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 E9PMD0 336 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 OFD1O75665 1012 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 ARF4P18085 180 aaPredicted RBP17.96■□□□□ 0.47
COL1A1-202ENST00000463440 NCLP19338 710 aaKnown RBP17.96■□□□□ 0.47
COL1A1-202ENST00000463440 NAMPTP43490 491 aa17.96■□□□□ 0.47
COL1A1-202ENST00000463440 ALDH7A1P49419 539 aaKnown RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms