RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 ST3GAL1Q11201 340 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 BMS1Q14692 1282 aaKnown RBP8.12□□□□□ -1.11
PTPRF-210ENST00000463041 C8orf34Q49A92 452 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 CLLU1OSQ5K130 101 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 MRPL10Q7Z7H8 261 aaKnown RBP8.12□□□□□ -1.11
PTPRF-210ENST00000463041 FERMT3Q86UX7 667 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 LRRC43Q8N309 656 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 FAM184AQ8NB25 1140 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 RNF169Q8NCN4 708 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 CNNM3Q8NE01 707 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 MTRQ99707 1265 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 TUFT1Q9NNX1 390 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 FAM105AQ9NUU6 356 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 CD207Q9UJ71 328 aa8.12□□□□□ -1.11
PTPRF-210ENST00000463041 PIN4Q9Y237 131 aaKnown RBP8.12□□□□□ -1.11
PTPRF-210ENST00000463041 C19orf67A6NJJ6 358 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 FSCN2O14926 492 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 MBTPS2O43462 519 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 OFD1O75665 1012 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 ALADP13716 330 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 ATF7P17544 494 aaPredicted RBP8.11□□□□□ -1.11
PTPRF-210ENST00000463041 ATP2B1P20020 1258 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 MUTP22033 750 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 HOXA11P31270 313 aaPredicted RBP8.11□□□□□ -1.11
PTPRF-210ENST00000463041 SSTR3P32745 418 aaPredicted RBP8.11□□□□□ -1.11
PTPRF-210ENST00000463041 MCM7P33993 719 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 ARL2P36404 184 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 NRIP1P48552 1158 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 TRAPPC10P48553 1259 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 NDUFV1P49821 464 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 FOSBP53539 338 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 BCAR1P56945 870 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 PTENP60484 403 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 GUCY1B3Q02153 619 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 COASYQ13057 564 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 SMAD4Q13485 552 aaKnown RBP8.11□□□□□ -1.11
PTPRF-210ENST00000463041 TFDP1Q14186 410 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 PDIA5Q14554 519 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 EMC2Q15006 297 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 RABEP1Q15276 862 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 SMAD2Q15796 467 aaKnown RBP8.11□□□□□ -1.11
PTPRF-210ENST00000463041 NOMO2Q5JPE7 1267 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 GLB1LQ6UWU2 654 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 TMEM184AQ6ZMB5 413 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 TMC7Q7Z402 723 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 ADGRD2Q7Z7M1 963 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 RBM23Q86U06 439 aaKnown RBP8.11□□□□□ -1.11
PTPRF-210ENST00000463041 IFNLR1Q8IU57 520 aaPredicted RBP8.11□□□□□ -1.11
PTPRF-210ENST00000463041 ADHFE1Q8IWW8 467 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 RNF149Q8NC42 400 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 HELQQ8TDG4 1101 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 MSLNLQ96KJ4 702 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 NACC1Q96RE7 527 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 POLR3CQ9BUI4 534 aaPredicted RBP8.11□□□□□ -1.11
PTPRF-210ENST00000463041 TMEM60Q9H2L4 133 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 EPHX3Q9H6B9 360 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 CD320Q9NPF0 282 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 UBN1Q9NPG3 1134 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 AGPAT5Q9NUQ2 364 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 KANSL3Q9P2N6 904 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 DAXXQ9UER7 740 aaPredicted RBP8.11□□□□□ -1.11
PTPRF-210ENST00000463041 PCDHB2Q9Y5E7 798 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 STK24Q9Y6E0 443 aa8.11□□□□□ -1.11
PTPRF-210ENST00000463041 ARID2Q68CP9 1835 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 CNTNAP2Q9UHC6 1331 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 WNT7AO00755 349 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 PER2O15055 1255 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 LINC01565O15544 149 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 ST18O60284 1047 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 GPR37L1O60883 481 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 CSPG5O95196 566 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 CXCL14O95715 111 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 ALDH2P05091 517 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 SPATA31C1P0DKV0 1188 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 SRGAP2BP0DMP2 458 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 NCLP19338 710 aaKnown RBP8.1□□□□□ -1.11
PTPRF-210ENST00000463041 U2AF2P26368 475 aaKnown RBP eCLIP8.1□□□□□ -1.11
PTPRF-210ENST00000463041 RPA1P27694 616 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 TECP42680 631 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 RARRES1P49788 294 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 RNASELQ05823 741 aaKnown RBP8.1□□□□□ -1.11
PTPRF-210ENST00000463041 GNL2Q13823 731 aaKnown RBP8.1□□□□□ -1.11
PTPRF-210ENST00000463041 ZNF174Q15697 407 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 DUSP6Q16828 381 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 CATSPER3Q86XQ3 398 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 NOSTRINQ8IVI9 506 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 SLC39A11Q8N1S5 342 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 MRPL43Q8N983 215 aaKnown RBP8.1□□□□□ -1.11
PTPRF-210ENST00000463041 ERMNQ8TAM6 284 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 URGCPQ8TCY9 931 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 PIGOQ8TEQ8 1089 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 CCDC51Q96ER9 411 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 TMEM169Q96HH4 297 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 CCDC43Q96MW1 224 aaKnown RBP8.1□□□□□ -1.11
PTPRF-210ENST00000463041 POP1Q99575 1024 aaKnown RBP8.1□□□□□ -1.11
PTPRF-210ENST00000463041 TCF25Q9BQ70 676 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 NFKBIZQ9BYH8 718 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 NRDE2Q9H7Z3 1164 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 MINDY3Q9H8M7 445 aa8.1□□□□□ -1.11
PTPRF-210ENST00000463041 XPNPEP1Q9NQW7 623 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms