RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-204	ENST00000462815	DAGLB	Q8NCG7	672 aa		12.56	□□□□□ -0.4
PTPN7-204	ENST00000462815	GCOM2	Q9BZD3	368 aa	Predicted RBP	12.56	□□□□□ -0.4
PTPN7-204	ENST00000462815	FAM105A	Q9NUU6	356 aa		12.56	□□□□□ -0.4
PTPN7-204	ENST00000462815	WRAP73	Q9P2S5	460 aa	Predicted RBP	12.56	□□□□□ -0.4
PTPN7-204	ENST00000462815	DNAJB4	Q9UDY4	337 aa		12.56	□□□□□ -0.4
PTPN7-204	ENST00000462815	SEPT9	Q9UHD8	586 aa	Predicted RBP	12.56	□□□□□ -0.4
PTPN7-204	ENST00000462815	TCEAL9	Q9UHQ7	104 aa		12.56	□□□□□ -0.4
PTPN7-204	ENST00000462815	VAV3	Q9UKW4	847 aa		12.56	□□□□□ -0.4
PTPN7-204	ENST00000462815	PCDHA4	Q9UN74	947 aa		12.56	□□□□□ -0.4
PTPN7-204	ENST00000462815	ZNF292	O60281	2723 aa		12.56	□□□□□ -0.4
PTPN7-204	ENST00000462815	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	EML1	O00423	815 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	GALR2	O43603	387 aa	Predicted RBP	12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	SLC37A4	O43826	429 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	ST18	O60284	1047 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	ZC3H11A	O75152	810 aa	Known RBP eCLIP	12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	CXCL14	O95715	111 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	ASGR2	P07307	311 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	MTHFR	P42898	656 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	SLC11A1	P49279	550 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	ALDH7A1	P49419	539 aa	Known RBP	12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	CCT2	P78371	535 aa	Known RBP	12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	PTPN14	Q15678	1187 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	UBXN11	Q5T124	520 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	RARS2	Q5T160	578 aa	Known RBP	12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	PLA2G4F	Q68DD2	849 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	AGMO	Q6ZNB7	445 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	MIER3	Q7Z3K6	550 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	ZNF280B	Q86YH2	543 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	ZNF579	Q8NAF0	562 aa	Known RBP	12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	TMEM169	Q96HH4	297 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	AIFM3	Q96NN9	605 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	MINDY3	Q9H8M7	445 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	TSHZ2	Q9NRE2	1034 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	AGPAT5	Q9NUQ2	364 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	DZANK1	Q9NVP4	752 aa		12.55	□□□□□ -0.4
PTPN7-204	ENST00000462815	DNAH14	Q0VDD8	3507 aa		12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	C2orf16	Q68DN1	1984 aa		12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	ARID2	Q68CP9	1835 aa		12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815		H0Y858	1186 aa		12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	DDHD2	O94830	711 aa		12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	SFPQ	P23246	707 aa	Known RBP eCLIP	12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	HOXA11	P31270	313 aa	Predicted RBP	12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	FGD1	P98174	961 aa		12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	CDC42EP1	Q00587	391 aa		12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	LONRF3	Q496Y0	759 aa		12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	NOMO2	Q5JPE7	1267 aa		12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	CWF19L1	Q69YN2	538 aa	Known RBP	12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	CES5A	Q6NT32	575 aa		12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	MRPL10	Q7Z7H8	261 aa	Known RBP	12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	SCLT1	Q96NL6	688 aa		12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	KCNMB3	Q9NPA1	279 aa		12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	SUCLA2	Q9P2R7	463 aa	Predicted RBP	12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	PIN4	Q9Y237	131 aa	Known RBP	12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	UST	Q9Y2C2	406 aa		12.54	□□□□□ -0.4
PTPN7-204	ENST00000462815	GFRA3	O60609	400 aa		12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	PAPLN	O95428	1278 aa		12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	CLCN4	P51793	760 aa		12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	NPEPPS	P55786	919 aa		12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	NLRP5	P59047	1200 aa		12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	AKAP17A	Q02040	695 aa	Known RBP	12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	PPP2R5C	Q13362	524 aa		12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	TWF2	Q6IBS0	349 aa	Known RBP	12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	GPR149	Q86SP6	731 aa		12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	RHPN2	Q8IUC4	686 aa		12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	RNF168	Q8IYW5	571 aa	Predicted RBP	12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	BLID	Q8IZY5	108 aa		12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	SNX27	Q96L92	541 aa		12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	DHX33	Q9H6R0	707 aa	Known RBP	12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	ZSWIM6	Q9HCJ5	1215 aa		12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	CYP26B1	Q9NR63	512 aa		12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	MARCH5	Q9NX47	278 aa		12.53	□□□□□ -0.4
PTPN7-204	ENST00000462815	INPPL1	O15357	1258 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	N4BP1	O75113	896 aa	Known RBP	12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	SKI	P12755	728 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	NPR3	P17342	541 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	NBL1	P41271	181 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	RAB27A	P51159	221 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	PSMC5	P62195	406 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	SPIRE1	Q08AE8	756 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	GIT2	Q14161	759 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	GLB1L	Q6UWU2	654 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	RUFY3	Q7L099	469 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	ASCL5	Q7RTU5	278 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	ZBTB33	Q86T24	672 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	FAM177A1	Q8N128	213 aa	Predicted RBP	12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	TDRD5	Q8NAT2	981 aa	Known RBP	12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	HAS1	Q92839	578 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	ATOH1	Q92858	354 aa	Predicted RBP	12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	NLRP4	Q96MN2	994 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	KLHL5	Q96PQ7	755 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	C22orf23	Q9BZE7	217 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	INO80B	Q9C086	356 aa	Predicted RBP	12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	LIMD1	Q9UGP4	676 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	PCDHB2	Q9Y5E7	798 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	COL4A3BP	Q9Y5P4	624 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	PTPRZ1	P23471	2315 aa	Predicted RBP	12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	SPTBN4	Q9H254	2564 aa		12.52	□□□□□ -0.41
PTPN7-204	ENST00000462815	CARNS1	A5YM72	827 aa		12.51	□□□□□ -0.41
PTPN7-204	ENST00000462815	DDX11L8	A8MPP1	907 aa		12.51	□□□□□ -0.41

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