RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 EPC1Q9H2F5 836 aa17.27■□□□□ 0.36
APP-211ENST00000462267 DNAJB4Q9UDY4 337 aa17.27■□□□□ 0.36
APP-211ENST00000462267 SMG5Q9UPR3 1016 aaKnown RBP17.27■□□□□ 0.36
APP-211ENST00000462267 SSX2IPQ9Y2D8 614 aa17.27■□□□□ 0.36
APP-211ENST00000462267 hCG_1642624A0A1W2PR95 340 aa17.26■□□□□ 0.35
APP-211ENST00000462267 KANSL1LA0AUZ9 987 aa17.26■□□□□ 0.35
APP-211ENST00000462267 IPO5O00410 1097 aaKnown RBP17.26■□□□□ 0.35
APP-211ENST00000462267 LRRN2O75325 713 aa17.26■□□□□ 0.35
APP-211ENST00000462267 OFD1O75665 1012 aa17.26■□□□□ 0.35
APP-211ENST00000462267 GLUD1P00367 558 aa17.26■□□□□ 0.35
APP-211ENST00000462267 ADH1AP07327 375 aa17.26■□□□□ 0.35
APP-211ENST00000462267 SREBF1P36956 1147 aa17.26■□□□□ 0.35
APP-211ENST00000462267 ZNF746Q6NUN9 644 aaPredicted RBP17.26■□□□□ 0.35
APP-211ENST00000462267 MB21D2Q8IYB1 491 aaPredicted RBP17.26■□□□□ 0.35
APP-211ENST00000462267 SMAP1Q8IYB5 467 aaPredicted RBP17.26■□□□□ 0.35
APP-211ENST00000462267 TMTC2Q8N394 836 aa17.26■□□□□ 0.35
APP-211ENST00000462267 HDAC7Q8WUI4 952 aa17.26■□□□□ 0.35
APP-211ENST00000462267 NLRP7Q8WX94 980 aa17.26■□□□□ 0.35
APP-211ENST00000462267 LPPQ93052 612 aa17.26■□□□□ 0.35
APP-211ENST00000462267 PGBD1Q96JS3 809 aa17.26■□□□□ 0.35
APP-211ENST00000462267 ZNF668Q96K58 619 aaPredicted RBP17.26■□□□□ 0.35
APP-211ENST00000462267 MTA3Q9BTC8 594 aa17.26■□□□□ 0.35
APP-211ENST00000462267 ANO3Q9BYT9 981 aa17.26■□□□□ 0.35
APP-211ENST00000462267 OSBPL6Q9BZF3 934 aa17.26■□□□□ 0.35
APP-211ENST00000462267 RIC8AQ9NPQ8 531 aa17.26■□□□□ 0.35
APP-211ENST00000462267 ZSCAN32Q9NX65 697 aa17.26■□□□□ 0.35
APP-211ENST00000462267 USP18Q9UMW8 372 aa17.26■□□□□ 0.35
APP-211ENST00000462267 INPP5FQ9Y2H2 1132 aa17.26■□□□□ 0.35
APP-211ENST00000462267 DOCK8Q8NF50 2099 aa17.25■□□□□ 0.35
APP-211ENST00000462267 TBC1D4O60343 1298 aa17.25■□□□□ 0.35
APP-211ENST00000462267 LILRB5O75023 590 aa17.25■□□□□ 0.35
APP-211ENST00000462267 ZNF623O75123 536 aa17.25■□□□□ 0.35
APP-211ENST00000462267 ALDH2P05091 517 aa17.25■□□□□ 0.35
APP-211ENST00000462267 URODP06132 367 aa17.25■□□□□ 0.35
APP-211ENST00000462267 PSAPP07602 524 aa17.25■□□□□ 0.35
APP-211ENST00000462267 CALM1P0DP23 149 aa17.25■□□□□ 0.35
APP-211ENST00000462267 CALM2P0DP24 149 aa17.25■□□□□ 0.35
APP-211ENST00000462267 CALM3P0DP25 149 aa17.25■□□□□ 0.35
APP-211ENST00000462267 TGM1P22735 817 aa17.25■□□□□ 0.35
APP-211ENST00000462267 MAGEA9P43362 315 aa17.25■□□□□ 0.35
APP-211ENST00000462267 RAB27AP51159 221 aa17.25■□□□□ 0.35
APP-211ENST00000462267 CDC42EP1Q00587 391 aa17.25■□□□□ 0.35
APP-211ENST00000462267 CSTF1Q05048 431 aaKnown RBP17.25■□□□□ 0.35
APP-211ENST00000462267 TWF2Q6IBS0 349 aaKnown RBP17.25■□□□□ 0.35
APP-211ENST00000462267 PLA2G4DQ86XP0 818 aa17.25■□□□□ 0.35
APP-211ENST00000462267 RPS6KC1Q96S38 1066 aa17.25■□□□□ 0.35
APP-211ENST00000462267 TMEM175Q9BSA9 504 aa17.25■□□□□ 0.35
APP-211ENST00000462267 DDX23Q9BUQ8 820 aaKnown RBP17.25■□□□□ 0.35
APP-211ENST00000462267 TBC1D22BQ9NU19 505 aa17.25■□□□□ 0.35
APP-211ENST00000462267 PCDHA10Q9Y5I2 948 aa17.25■□□□□ 0.35
APP-211ENST00000462267 TAF6LQ9Y6J9 622 aa17.25■□□□□ 0.35
APP-211ENST00000462267 ZFP37Q9Y6Q3 630 aaPredicted RBP17.25■□□□□ 0.35
APP-211ENST00000462267 NUMBLQ9Y6R0 609 aa17.25■□□□□ 0.35
APP-211ENST00000462267 TEX28O15482 410 aa17.24■□□□□ 0.35
APP-211ENST00000462267 RFPL2O75678 378 aa17.24■□□□□ 0.35
APP-211ENST00000462267 C1RP00736 705 aa17.24■□□□□ 0.35
APP-211ENST00000462267 SOD2P04179 222 aa17.24■□□□□ 0.35
APP-211ENST00000462267 AK2P54819 239 aa17.24■□□□□ 0.35
APP-211ENST00000462267 PRKCQQ04759 706 aa17.24■□□□□ 0.35
APP-211ENST00000462267 AP3B2Q13367 1082 aa17.24■□□□□ 0.35
APP-211ENST00000462267 LONRF3Q496Y0 759 aa17.24■□□□□ 0.35
APP-211ENST00000462267 NFXL1Q6ZNB6 911 aa17.24■□□□□ 0.35
APP-211ENST00000462267 ZNF280BQ86YH2 543 aa17.24■□□□□ 0.35
APP-211ENST00000462267 URGCPQ8TCY9 931 aa17.24■□□□□ 0.35
APP-211ENST00000462267 NELL1Q92832 810 aa17.24■□□□□ 0.35
APP-211ENST00000462267 ZNF707Q96C28 371 aaPredicted RBP17.24■□□□□ 0.35
APP-211ENST00000462267 GCOM2Q9BZD3 368 aaPredicted RBP17.24■□□□□ 0.35
APP-211ENST00000462267 PLEKHA4Q9H4M7 779 aa17.24■□□□□ 0.35
APP-211ENST00000462267 PIDD1Q9HB75 910 aa17.24■□□□□ 0.35
APP-211ENST00000462267 NRBP2Q9NSY0 501 aa17.24■□□□□ 0.35
APP-211ENST00000462267 FAM105AQ9NUU6 356 aa17.24■□□□□ 0.35
APP-211ENST00000462267 GABBR1Q9UBS5 961 aa17.24■□□□□ 0.35
APP-211ENST00000462267 TCEAL9Q9UHQ7 104 aa17.24■□□□□ 0.35
APP-211ENST00000462267 FAN1Q9Y2M0 1017 aa17.24■□□□□ 0.35
APP-211ENST00000462267 MYH9P35579 1960 aaKnown RBP17.23■□□□□ 0.35
APP-211ENST00000462267 CCDC69A6NI79 296 aa17.23■□□□□ 0.35
APP-211ENST00000462267 FAM86B1E9PN63 330 aa17.23■□□□□ 0.35
APP-211ENST00000462267 C2CD2LO14523 706 aa17.23■□□□□ 0.35
APP-211ENST00000462267 B4GALT3O60512 393 aa17.23■□□□□ 0.35
APP-211ENST00000462267 CSDE1O75534 798 aaKnown RBP17.23■□□□□ 0.35
APP-211ENST00000462267 FAM86B2P0C5J1 330 aa17.23■□□□□ 0.35
APP-211ENST00000462267 SFPQP23246 707 aaKnown RBP eCLIP17.23■□□□□ 0.35
APP-211ENST00000462267 NAPAP54920 295 aa17.23■□□□□ 0.35
APP-211ENST00000462267 GPC5P78333 572 aa17.23■□□□□ 0.35
APP-211ENST00000462267 PPP1R18Q6NYC8 613 aa17.23■□□□□ 0.35
APP-211ENST00000462267 CASC1Q6TDU7 716 aa17.23■□□□□ 0.35
APP-211ENST00000462267 CHD1LQ86WJ1 897 aa17.23■□□□□ 0.35
APP-211ENST00000462267 CCDC82Q8N4S0 544 aa17.23■□□□□ 0.35
APP-211ENST00000462267 PHKBQ93100 1093 aa17.23■□□□□ 0.35
APP-211ENST00000462267 PGBD4Q96DM1 585 aa17.23■□□□□ 0.35
APP-211ENST00000462267 NT5C3AQ9H0P0 336 aa17.23■□□□□ 0.35
APP-211ENST00000462267 ZDHHC7Q9NXF8 308 aa17.23■□□□□ 0.35
APP-211ENST00000462267 KANSL3Q9P2N6 904 aa17.23■□□□□ 0.35
APP-211ENST00000462267 GMEB2Q9UKD1 530 aa17.23■□□□□ 0.35
APP-211ENST00000462267 IGLV3-22A0A075B6J6 115 aa17.22■□□□□ 0.35
APP-211ENST00000462267 MEIS3P2A8K0S8 358 aa17.22■□□□□ 0.35
APP-211ENST00000462267 DDHD2O94830 711 aa17.22■□□□□ 0.35
APP-211ENST00000462267 ADCY7P51828 1080 aa17.22■□□□□ 0.35
APP-211ENST00000462267 PTH1RQ03431 593 aa17.22■□□□□ 0.35
APP-211ENST00000462267 SNW1Q13573 536 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms