RNA–Protein interactions for RNA: ENST00000461682.1

NDUFB4-202, Transcript of NADH:ubiquinone oxidoreductase subunit B4, humanhuman

TSL 3

Gene NDUFB4, Length 821 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB4-202ENST00000461682 PNMA5Q96PV4 448 aa16.95■□□□□ 0.3
NDUFB4-202ENST00000461682 MRPL42Q9Y6G3 142 aaKnown RBP16.95■□□□□ 0.3
NDUFB4-202ENST00000461682 RALGAPA2Q2PPJ7 1873 aa16.95■□□□□ 0.3
NDUFB4-202ENST00000461682 SSBP05455 408 aaKnown RBP eCLIP16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 ZSCAN22P10073 491 aaPredicted RBP16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 POU3F3P20264 500 aaPredicted RBP16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 MARCKSP29966 332 aaPredicted RBP16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 AXLP30530 894 aa16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 BMPR1AP36894 532 aa16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 MBTD1Q05BQ5 628 aa16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 TMEM119Q4V9L6 283 aa16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 FOXD4L5Q5VV16 416 aaPredicted RBP16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 KCNK18Q7Z418 384 aa16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 MICALL1Q8N3F8 863 aa16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 FOXD4L4Q8WXT5 416 aaPredicted RBP16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 ZNF396Q96N95 335 aaPredicted RBP16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 USP28Q96RU2 1077 aa16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 PLIN2Q99541 437 aa16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 TMEM117Q9H0C3 514 aa16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 C2orf40Q9H1Z8 148 aa16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 FAM105AQ9NUU6 356 aa16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 MTCH2Q9Y6C9 303 aa16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 NLRC5Q86WI3 1866 aa16.94■□□□□ 0.3
NDUFB4-202ENST00000461682 TSPAN1O60635 241 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 LPXNO60711 386 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 RB1P06400 928 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 LINC00271P0C7V0 271 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 HOXA11P31270 313 aaPredicted RBP16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 NAMPTP43490 491 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 GRIN1Q05586 938 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 GPM6BQ13491 265 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 SPOUT1Q5T280 376 aaKnown RBP16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 CDCA2Q69YH5 1023 aaPredicted RBP16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 NOTUMQ6P988 496 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 ZNF598Q86UK7 904 aaKnown RBP16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 DEPTORQ8TB45 409 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 BSNDQ8WZ55 320 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 CCDC51Q96ER9 411 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 DRC1Q96MC2 740 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 C11orf84Q9BUA3 381 aaPredicted RBP16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 RUSC1Q9BVN2 902 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 TIPINQ9BVW5 301 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 PLVAPQ9BX97 442 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 LMCD1Q9NZU5 365 aa16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 FBXO2Q9UK22 296 aaPredicted RBP16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 SRPRBQ9Y5M8 271 aaKnown RBP16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 MORC2Q9Y6X9 1032 aaPredicted RBP16.93■□□□□ 0.3
NDUFB4-202ENST00000461682 C5orf67F2Z3F1 127 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 H3BNC9 293 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 ZNF623O75123 536 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 PLA2G4BP0C869 781 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 ATF7P17544 494 aaPredicted RBP16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 SLC39A14Q15043 492 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 STK38Q15208 465 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 PTPROQ16827 1216 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 RINT1Q6NUQ1 792 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 SYT2Q8N9I0 419 aaPredicted RBP16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 PPM1EQ8WY54 764 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 RSPH1Q8WYR4 309 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 PGBD4Q96DM1 585 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 CSRNP2Q9H175 543 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 AAASQ9NRG9 546 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 RNF19AQ9NV58 838 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 PRMT7Q9NVM4 692 aaPredicted RBP16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 KCND2Q9NZV8 630 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 PCDHB2Q9Y5E7 798 aa16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 FNDC1Q4ZHG4 1894 aaPredicted RBP16.92■□□□□ 0.3
NDUFB4-202ENST00000461682 HIP1RO75146 1068 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 F13A1P00488 732 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 GUCY2CP25092 1073 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 TXLNAP40222 546 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 NASPP49321 788 aaPredicted RBP16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 BECN1Q14457 450 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 KARSQ15046 597 aaKnown RBP16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 CCDC85BQ15834 202 aaPredicted RBP16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 AMHR2Q16671 573 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 CLLU1OSQ5K130 101 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 PPP4R3CPQ6ZMV5 832 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 C1orf186Q6ZWK4 172 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 LRRC43Q8N309 656 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 KRI1Q8N9T8 703 aaKnown RBP16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 HELQQ8TDG4 1101 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 CPB2Q96IY4 423 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 PRIMPOLQ96LW4 560 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 CASD1Q96PB1 797 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 CCSER1Q9C0I3 900 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 POLD4Q9HCU8 107 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 MYH15Q9Y2K3 1946 aa16.91■□□□□ 0.3
NDUFB4-202ENST00000461682 ARF4P18085 180 aaPredicted RBP16.9■□□□□ 0.3
NDUFB4-202ENST00000461682 PLCG1P19174 1290 aa16.9■□□□□ 0.3
NDUFB4-202ENST00000461682 EFNA5P52803 228 aa16.9■□□□□ 0.3
NDUFB4-202ENST00000461682 SLC12A3P55017 1021 aa16.9■□□□□ 0.3
NDUFB4-202ENST00000461682 DMP1Q13316 513 aaPredicted RBP16.9■□□□□ 0.3
NDUFB4-202ENST00000461682 MAPK6Q16659 721 aa16.9■□□□□ 0.3
NDUFB4-202ENST00000461682 FAM187BQ17R55 369 aa16.9■□□□□ 0.3
NDUFB4-202ENST00000461682 NAALADL2Q58DX5 795 aa16.9■□□□□ 0.3
NDUFB4-202ENST00000461682 UBXN11Q5T124 520 aa16.9■□□□□ 0.3
NDUFB4-202ENST00000461682 GLB1LQ6UWU2 654 aa16.9■□□□□ 0.3
NDUFB4-202ENST00000461682 CNNM3Q8NE01 707 aa16.9■□□□□ 0.3
NDUFB4-202ENST00000461682 LPPQ93052 612 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms