RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 ZNF689Q96CS4 500 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 CLIC6Q96NY7 704 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 NFKBIZQ9BYH8 718 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 CCSER1Q9C0I3 900 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 C2orf40Q9H1Z8 148 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 POLD4Q9HCU8 107 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 DAXXQ9UER7 740 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 CCDC39Q9UFE4 941 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 FBXO2Q9UK22 296 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 MORC2Q9Y6X9 1032 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 MYH11P35749 1972 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 RALGAPA2Q2PPJ7 1873 aa11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 FNDC1Q4ZHG4 1894 aaPredicted RBP11.72□□□□□ -0.53
TRAPPC12-213ENST00000461577 COL4A6Q14031 1691 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 A0A0U1RQF3 1178 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 TBKBP1A7MCY6 615 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 RFXAPO00287 272 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 SPTLC2O15270 562 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 GTPBP6O43824 516 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 YEATS4O95619 227 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 EOMESO95936 686 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 PLCG1P19174 1290 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 AXLP30530 894 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 NAMPTP43490 491 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 GATMP50440 423 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 RAB27AP51159 221 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 MBTD1Q05BQ5 628 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 PKP1Q13835 747 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 KARSQ15046 597 aaKnown RBP11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 TMEM132AQ24JP5 1023 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 SPOUT1Q5T280 376 aaKnown RBP11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 C1orf186Q6ZWK4 172 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 SPRED2Q7Z698 418 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 TMEM192Q8IY95 271 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 ABI1Q8IZP0 508 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 CRIPAKQ8N1N5 446 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 LINC00301Q8NCQ3 95 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 BSNDQ8WZ55 320 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 EPSTI1Q96J88 318 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 DRC1Q96MC2 740 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 C17orf80Q9BSJ5 609 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 RUSC1Q9BVN2 902 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 TIPINQ9BVW5 301 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 RC3H2Q9HBD1 1191 aaKnown RBP11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 PRMT7Q9NVM4 692 aaPredicted RBP11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 RWDD3Q9Y3V2 267 aa11.71□□□□□ -0.53
TRAPPC12-213ENST00000461577 EPOPA6NHQ4 379 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 CCDC169A6NNP5 214 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 TSPAN1O60635 241 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 HIP1RO75146 1068 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 PPP6R2O75170 966 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 FGFR1P11362 822 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 LIG1P18858 919 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 CTNNB1P35222 781 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 SLC12A3P55017 1021 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 PEX3P56589 373 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 DHX8Q14562 1220 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 MAPK6Q16659 721 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 EPC2Q52LR7 807 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 CDCA2Q69YH5 1023 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 ATL3Q6DD88 541 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 NOTUMQ6P988 496 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 GDPD5Q8WTR4 605 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 RAD54LQ92698 747 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 SYMPKQ92797 1274 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 PGBD4Q96DM1 585 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 CCDC51Q96ER9 411 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 CPB2Q96IY4 423 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 TRAIPQ9BWF2 469 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 FAM105AQ9NUU6 356 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 KCND2Q9NZV8 630 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 CFAP45Q9UL16 551 aa11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 MRPL42Q9Y6G3 142 aaKnown RBP11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 COL4A4P53420 1690 aaPredicted RBP11.7□□□□□ -0.54
TRAPPC12-213ENST00000461577 BRD1O95696 1058 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 PRKCBP05771 671 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 KRT18P05783 430 aaKnown RBP11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 RB1P06400 928 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 GUCY2CP25092 1073 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 HOXA11P31270 313 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 EFNA5P52803 228 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 RAD51AP2Q09MP3 1159 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 DMP1Q13316 513 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 ADGRE1Q14246 886 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 MCM6Q14566 821 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 RRAGBQ5VZM2 374 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 USP49Q70CQ1 688 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 GPBP1Q86WP2 473 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 MICALL1Q8N3F8 863 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 CNNM3Q8NE01 707 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 MAFAQ8NHW3 353 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 KCNG4Q8TDN1 519 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 CLP1Q92989 425 aaKnown RBP11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 PRIMPOLQ96LW4 560 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 TRIM6Q9C030 488 aaPredicted RBP11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 TMEM117Q9H0C3 514 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 C17orf75Q9HAS0 396 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 KMT5AQ9NQR1 393 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 AAASQ9NRG9 546 aa11.69□□□□□ -0.54
TRAPPC12-213ENST00000461577 BLOC1S4Q9NUP1 217 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms