RNA–Protein interactions for RNA: ENST00000461187.5

SMPD4-216, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 659 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-216ENST00000461187 DOCK6Q96HP0 2047 aa16.48■□□□□ 0.23
SMPD4-216ENST00000461187 STK36Q9NRP7 1315 aa16.47■□□□□ 0.23
SMPD4-216ENST00000461187 DOCK8Q8NF50 2099 aa16.47■□□□□ 0.23
SMPD4-216ENST00000461187 DTNBO60941 627 aa16.47■□□□□ 0.23
SMPD4-216ENST00000461187 CLASP2O75122 1294 aaKnown RBP16.47■□□□□ 0.23
SMPD4-216ENST00000461187 ZNF623O75123 536 aa16.47■□□□□ 0.23
SMPD4-216ENST00000461187 CDKL5O76039 1030 aa16.47■□□□□ 0.23
SMPD4-216ENST00000461187 P4HBP07237 508 aaKnown RBP16.47■□□□□ 0.23
SMPD4-216ENST00000461187 SKIP12755 728 aa16.47■□□□□ 0.23
SMPD4-216ENST00000461187 GCFC2P16383 781 aaKnown RBP16.47■□□□□ 0.23
SMPD4-216ENST00000461187 CATSPER4Q7RTX7 472 aa16.47■□□□□ 0.23
SMPD4-216ENST00000461187 TMEM173Q86WV6 379 aaPredicted RBP16.47■□□□□ 0.23
SMPD4-216ENST00000461187 OXER1Q8TDS5 423 aa16.47■□□□□ 0.23
SMPD4-216ENST00000461187 HAS1Q92839 578 aa16.47■□□□□ 0.23
SMPD4-216ENST00000461187 PBXIP1Q96AQ6 731 aa16.47■□□□□ 0.23
SMPD4-216ENST00000461187 TMEM169Q96HH4 297 aa16.47■□□□□ 0.23
SMPD4-216ENST00000461187 SLKQ9H2G2 1235 aaPredicted RBP16.47■□□□□ 0.23
SMPD4-216ENST00000461187 NRDE2Q9H7Z3 1164 aa16.47■□□□□ 0.23
SMPD4-216ENST00000461187 TBC1D13Q9NVG8 400 aa16.47■□□□□ 0.23
SMPD4-216ENST00000461187 CDH22Q9UJ99 828 aa16.47■□□□□ 0.23
SMPD4-216ENST00000461187 PFKFB2O60825 505 aa16.46■□□□□ 0.23
SMPD4-216ENST00000461187 DKC1O60832 514 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMPD4-216ENST00000461187 ZC3H11AO75152 810 aaKnown RBP eCLIP16.46■□□□□ 0.23
SMPD4-216ENST00000461187 OFD1O75665 1012 aa16.46■□□□□ 0.23
SMPD4-216ENST00000461187 CXCL14O95715 111 aa16.46■□□□□ 0.23
SMPD4-216ENST00000461187 RAB27AP51159 221 aa16.46■□□□□ 0.23
SMPD4-216ENST00000461187 NOMO2Q5JPE7 1267 aa16.46■□□□□ 0.23
SMPD4-216ENST00000461187 GLB1LQ6UWU2 654 aa16.46■□□□□ 0.23
SMPD4-216ENST00000461187 VPS52Q8N1B4 723 aa16.46■□□□□ 0.23
SMPD4-216ENST00000461187 ZBP1Q9H171 429 aa16.46■□□□□ 0.23
SMPD4-216ENST00000461187 DHX33Q9H6R0 707 aaKnown RBP16.46■□□□□ 0.23
SMPD4-216ENST00000461187 AGPAT5Q9NUQ2 364 aa16.46■□□□□ 0.23
SMPD4-216ENST00000461187 TPCN1Q9ULQ1 816 aa16.46■□□□□ 0.23
SMPD4-216ENST00000461187 COL4A3BPQ9Y5P4 624 aa16.46■□□□□ 0.23
SMPD4-216ENST00000461187 TBX3O15119 743 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 CCNT1O60563 726 aaKnown RBP16.45■□□□□ 0.22
SMPD4-216ENST00000461187 CTDNEP1O95476 244 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 GALTP07902 379 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 XBP1P17861 261 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 SIGLEC14Q08ET2 396 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 EPHA7Q15375 998 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 PTPN21Q16825 1174 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 TPRNQ4KMQ1 711 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 EARS2Q5JPH6 523 aaKnown RBP16.45■□□□□ 0.22
SMPD4-216ENST00000461187 PIK3AP1Q6ZUJ8 805 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 DDX53Q86TM3 631 aaKnown RBP16.45■□□□□ 0.22
SMPD4-216ENST00000461187 C4orf19Q8IY42 314 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 BCL7CQ8WUZ0 217 aaPredicted RBP16.45■□□□□ 0.22
SMPD4-216ENST00000461187 PRPF31Q8WWY3 499 aaKnown RBP16.45■□□□□ 0.22
SMPD4-216ENST00000461187 AUTS2Q8WXX7 1259 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 SLC7A3Q8WY07 619 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 IGSF21Q96ID5 467 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 CEP170P1Q96L14 293 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 ADAM7Q9H2U9 754 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 MINDY3Q9H8M7 445 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 DNAJB4Q9UDY4 337 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 INPP5FQ9Y2H2 1132 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 PPME1Q9Y570 386 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 IRAK3Q9Y616 596 aa16.45■□□□□ 0.22
SMPD4-216ENST00000461187 CARNS1A5YM72 827 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 B4GALT3O60512 393 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 CTSAP10619 480 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 SP100P23497 879 aaPredicted RBP16.44■□□□□ 0.22
SMPD4-216ENST00000461187 CA8P35219 290 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 MRE11P49959 708 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 POLGP54098 1239 aaPredicted RBP16.44■□□□□ 0.22
SMPD4-216ENST00000461187 ITIH3Q06033 890 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 SPIRE1Q08AE8 756 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 BMS1Q14692 1282 aaKnown RBP16.44■□□□□ 0.22
SMPD4-216ENST00000461187 IER5LQ5T953 404 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 AGMOQ6ZNB7 445 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 SRGAP1Q7Z6B7 1085 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 MRPL10Q7Z7H8 261 aaKnown RBP16.44■□□□□ 0.22
SMPD4-216ENST00000461187 POTEDQ86YR6 584 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 EXOC8Q8IYI6 725 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 PSPC1Q8WXF1 523 aaKnown RBP16.44■□□□□ 0.22
SMPD4-216ENST00000461187 TMEM143Q96AN5 459 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 ASIC4Q96FT7 647 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 NAP1L4Q99733 375 aaKnown RBP16.44■□□□□ 0.22
SMPD4-216ENST00000461187 LXNQ9BS40 222 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 POMKQ9H5K3 350 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 RGL1Q9NZL6 768 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 PCDHB2Q9Y5E7 798 aa16.44■□□□□ 0.22
SMPD4-216ENST00000461187 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.43■□□□□ 0.22
SMPD4-216ENST00000461187 FAM205CA6NFA0 338 aa16.43■□□□□ 0.22
SMPD4-216ENST00000461187 ZBTB39O15060 712 aa16.43■□□□□ 0.22
SMPD4-216ENST00000461187 SRGAP2CP0DJJ0 459 aa16.43■□□□□ 0.22
SMPD4-216ENST00000461187 HOXA11P31270 313 aaPredicted RBP16.43■□□□□ 0.22
SMPD4-216ENST00000461187 YWHABP31946 246 aaKnown RBP16.43■□□□□ 0.22
SMPD4-216ENST00000461187 RFC5P40937 340 aa16.43■□□□□ 0.22
SMPD4-216ENST00000461187 SLC11A1P49279 550 aa16.43■□□□□ 0.22
SMPD4-216ENST00000461187 RNASELQ05823 741 aaKnown RBP16.43■□□□□ 0.22
SMPD4-216ENST00000461187 LAMTOR4Q0VGL1 99 aa16.43■□□□□ 0.22
SMPD4-216ENST00000461187 NCAPH2Q6IBW4 605 aa16.43■□□□□ 0.22
SMPD4-216ENST00000461187 CES5AQ6NT32 575 aa16.43■□□□□ 0.22
SMPD4-216ENST00000461187 ZNF280BQ86YH2 543 aa16.43■□□□□ 0.22
SMPD4-216ENST00000461187 FBXL6Q8N531 539 aa16.43■□□□□ 0.22
SMPD4-216ENST00000461187 PRSS33Q8NF86 280 aa16.43■□□□□ 0.22
SMPD4-216ENST00000461187 PGBD4Q96DM1 585 aa16.43■□□□□ 0.22
SMPD4-216ENST00000461187 DYDC2Q96IM9 177 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms