RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 CASQ1P31415 396 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 FMO5P49326 533 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 TTLL12Q14166 644 aaPredicted RBP11.87□□□□□ -0.51
IFT88-204ENST00000461115 SFMBT2Q5VUG0 894 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 CCDC62Q6P9F0 684 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 CACNA2D4Q7Z3S7 1137 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 ANKRD23Q86SG2 305 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 ABRAQ8N0Z2 381 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 EHBP1Q8NDI1 1231 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 LMO3Q8TAP4 145 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 ZNF526Q8TF50 670 aaPredicted RBP11.87□□□□□ -0.51
IFT88-204ENST00000461115 SLC10A4Q96EP9 437 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 CEP170P1Q96L14 293 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 CCDC42Q96M95 316 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 CCDC43Q96MW1 224 aaKnown RBP11.87□□□□□ -0.51
IFT88-204ENST00000461115 PCYT2Q99447 389 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 IRX2Q9BZI1 471 aaPredicted RBP11.87□□□□□ -0.51
IFT88-204ENST00000461115 IKZF4Q9H2S9 585 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 R3HDMLQ9H3Y0 253 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 ATP6V0A4Q9HBG4 840 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 ZNF302Q9NR11 478 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 DDX41Q9UJV9 622 aaKnown RBP11.87□□□□□ -0.51
IFT88-204ENST00000461115 ZNF215Q9UL58 517 aaPredicted RBP11.87□□□□□ -0.51
IFT88-204ENST00000461115 TBX20Q9UMR3 447 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 NENFQ9UMX5 172 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 BZW2Q9Y6E2 419 aaKnown RBP11.87□□□□□ -0.51
IFT88-204ENST00000461115 STYXL1Q9Y6J8 313 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 UTRNP46939 3433 aa11.87□□□□□ -0.51
IFT88-204ENST00000461115 RBM47A0AV96 593 aaKnown RBP11.86□□□□□ -0.51
IFT88-204ENST00000461115 KRT86O43790 486 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 N4BP1O75113 896 aaKnown RBP11.86□□□□□ -0.51
IFT88-204ENST00000461115 GFPT2O94808 682 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 ABL1P00519 1130 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 CETPP11597 493 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 SLC9A1P19634 815 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 GARTP22102 1010 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 RFC5P40937 340 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 KIF11P52732 1056 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 PEX3P56589 373 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 POLR2FP61218 127 aaKnown RBP11.86□□□□□ -0.51
IFT88-204ENST00000461115 NCBP1Q09161 790 aaKnown RBP11.86□□□□□ -0.51
IFT88-204ENST00000461115 DMP1Q13316 513 aaPredicted RBP11.86□□□□□ -0.51
IFT88-204ENST00000461115 KCTD2Q14681 263 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 SLC9C1Q4G0N8 1177 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 EAPPQ56P03 285 aaPredicted RBP11.86□□□□□ -0.51
IFT88-204ENST00000461115 BRDTQ58F21 947 aaPredicted RBP11.86□□□□□ -0.51
IFT88-204ENST00000461115 CYFIP1Q7L576 1253 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 IRF2BP2Q7Z5L9 587 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 KSR1Q8IVT5 923 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 XXYLT1Q8NBI6 393 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 SEPT1Q8WYJ6 367 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 BSNDQ8WZ55 320 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 VTI1AQ96AJ9 217 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 PAGR1Q9BTK6 254 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 TSGA10Q9BZW7 698 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 LZTFL1Q9NQ48 299 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 GPRC5CQ9NQ84 441 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 EMSYQ7Z589 1322 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 ANO9A1A5B4 782 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 RCCD1A6NED2 376 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 SLC16A4O15374 487 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 EXOC3O60645 756 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 IPO7O95373 1038 aaKnown RBP11.86□□□□□ -0.51
IFT88-204ENST00000461115 PLEKP08567 350 aaPredicted RBP11.86□□□□□ -0.51
IFT88-204ENST00000461115 ZBTB48P10074 688 aaPredicted RBP11.86□□□□□ -0.51
IFT88-204ENST00000461115 ADSSP30520 456 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 ARL2P36404 184 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 EIF4A3P38919 411 aaKnown RBP11.86□□□□□ -0.51
IFT88-204ENST00000461115 GCLCP48506 637 aaPredicted RBP11.86□□□□□ -0.51
IFT88-204ENST00000461115 GTF2A2P52657 109 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 AMPD2Q01433 879 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 DSG2Q14126 1118 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 C1orf220Q5T0J3 134 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 FAM102BQ5T8I3 360 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 PLPPR4Q7Z2D5 763 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 FMNL3Q8IVF7 1028 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 SYCP3Q8IZU3 236 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 TXLNBQ8N3L3 684 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 FAM167AQ96KS9 214 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 MMP19Q99542 508 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 CRACR2AQ9BSW2 395 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 LACRTQ9GZZ8 138 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 PORCNQ9H237 461 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 NLRC4Q9NPP4 1024 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 HSPBP1Q9NZL4 362 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 CDC23Q9UJX2 597 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 COQ4Q9Y3A0 265 aa11.86□□□□□ -0.51
IFT88-204ENST00000461115 ADGRA3Q8IWK6 1321 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 IGKV6-21A0A0C4DH24 114 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 ASB14A6NK59 587 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 BTNL10A8MVZ5 291 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 KIAA0391O15091 583 aaKnown RBP11.85□□□□□ -0.51
IFT88-204ENST00000461115 STRNO43815 780 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 GAS2O43903 313 aaKnown RBP11.85□□□□□ -0.51
IFT88-204ENST00000461115 TADA3O75528 432 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 CNGA1P29973 690 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 SLC26A2P50443 739 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 EMC2Q15006 297 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 SPA17Q15506 151 aa11.85□□□□□ -0.51
IFT88-204ENST00000461115 SLC18A3Q16572 532 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms