RNA–Protein interactions for RNA: ENST00000461056.5

SND1-202, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-202ENST00000461056 POLR2DO15514 142 aaKnown RBP9.04□□□□□ -0.96
SND1-202ENST00000461056 TSPAN1O60635 241 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 PLS3P13797 630 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 ATF7P17544 494 aaPredicted RBP9.04□□□□□ -0.96
SND1-202ENST00000461056 FGFR4P22455 802 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 STAT6P42226 847 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 DNM2P50570 870 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 NCKAP1LP55160 1127 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 DEFB103AP81534 67 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 LONRF3Q496Y0 759 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 UBXN11Q5T124 520 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 FAM102BQ5T8I3 360 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 SRGAP1Q7Z6B7 1085 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 RPUSD2Q8IZ73 545 aaKnown RBP9.04□□□□□ -0.96
SND1-202ENST00000461056 TDHQ8IZJ6 230 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 PDILTQ8N807 584 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 FSIP1Q8NA03 581 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 IQUBQ8NA54 791 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 RNF149Q8NC42 400 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 MRPS27Q92552 414 aaKnown RBP9.04□□□□□ -0.96
SND1-202ENST00000461056 SEPT8Q92599 483 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 DDX12PQ92771 950 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 APBB2Q92870 758 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 DHX58Q96C10 678 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 CDK5RAP3Q96JB5 506 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 NLRP4Q96MN2 994 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 C7orf25Q9BPX7 421 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 FGFBP2Q9BYJ0 223 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 PANK2Q9BZ23 570 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 UBE2OQ9C0C9 1292 aaKnown RBP9.04□□□□□ -0.96
SND1-202ENST00000461056 TNMDQ9H2S6 317 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 C17orf75Q9HAS0 396 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 MAGEF1Q9HAY2 307 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 AGPAT5Q9NUQ2 364 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 RNF19AQ9NV58 838 aa9.04□□□□□ -0.96
SND1-202ENST00000461056 SPTBN5Q9NRC6 3674 aaKnown RBP9.03□□□□□ -0.96
SND1-202ENST00000461056 ABHD14A-ACY1A0A1B0GW23 586 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 SFI1A8K8P3 1242 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 ENPP3O14638 875 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 B4GALT5O43286 388 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 KLRC4O43908 158 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 RPS6KA5O75582 802 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 FGBP02675 491 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 LINC00271P0C7V0 271 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 SRGAP2CP0DJJ0 459 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 MAPTP10636 758 aaKnown RBP9.03□□□□□ -0.96
SND1-202ENST00000461056 LIG1P18858 919 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 TXLNAP40222 546 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 PHKA2P46019 1235 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 PAK2Q13177 524 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 PCBP1Q15365 356 aaKnown RBP eCLIP9.03□□□□□ -0.96
SND1-202ENST00000461056 LRIT3Q3SXY7 679 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.03□□□□□ -0.96
SND1-202ENST00000461056 MAEAQ7L5Y9 396 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 OTOP2Q7RTS6 562 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 ZNF598Q86UK7 904 aaKnown RBP9.03□□□□□ -0.96
SND1-202ENST00000461056 GRAMD1CQ8IYS0 662 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 SPATA20Q8TB22 786 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 NLRP7Q8WX94 980 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 PAGE5Q96GU1 130 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 DRC1Q96MC2 740 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 GCOM2Q9BZD3 368 aaPredicted RBP9.03□□□□□ -0.96
SND1-202ENST00000461056 ST6GALNAC4Q9H4F1 302 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 PTPRHQ9HD43 1115 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 RGS18Q9NS28 235 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 FAM13BQ9NYF5 915 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 CCDC39Q9UFE4 941 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 USP25Q9UHP3 1055 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 SERTAD1Q9UHV2 236 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 CNTNAP2Q9UHC6 1331 aa9.03□□□□□ -0.96
SND1-202ENST00000461056 M0QZ92 97 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 SOX1O00570 391 aaPredicted RBP9.02□□□□□ -0.97
SND1-202ENST00000461056 GPR182O15218 404 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 MEFVO15553 781 aaPredicted RBP9.02□□□□□ -0.97
SND1-202ENST00000461056 ARHGEF15O94989 841 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 PIGRP01833 764 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 SSBP05455 408 aaKnown RBP eCLIP9.02□□□□□ -0.97
SND1-202ENST00000461056 ARF4P18085 180 aaPredicted RBP9.02□□□□□ -0.97
SND1-202ENST00000461056 PROZP22891 400 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 CASP1P29466 404 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 HOXD13P35453 343 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 CASP5P51878 434 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 PEX3P56589 373 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 HTRA4P83105 476 aaPredicted RBP9.02□□□□□ -0.97
SND1-202ENST00000461056 FAM160A1Q05DH4 1040 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 RAD51AP2Q09MP3 1159 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 TFDP1Q14186 410 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 NT5DC1Q5TFE4 455 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 KRBA2Q6ZNG9 492 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 SV2BQ7L1I2 683 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 EPM2AIP1Q7L775 607 aaPredicted RBP9.02□□□□□ -0.97
SND1-202ENST00000461056 GLIS3Q8NEA6 775 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 CCDC43Q96MW1 224 aaKnown RBP9.02□□□□□ -0.97
SND1-202ENST00000461056 FTHL17Q9BXU8 183 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 TMEM134Q9H6X4 195 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 CHST12Q9NRB3 414 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 OLFML3Q9NRN5 406 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 GINS2Q9Y248 185 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 USP20Q9Y2K6 914 aa9.02□□□□□ -0.97
SND1-202ENST00000461056 PCDHB13Q9Y5F0 798 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms