RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 MTRQ99707 1265 aa14.71□□□□□ -0.05
RAB11FIP3-207ENST00000461009 CHST12Q9NRB3 414 aa14.71□□□□□ -0.05
RAB11FIP3-207ENST00000461009 VCANP13611 3396 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 EOMESO95936 686 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 LINC00271P0C7V0 271 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 LAG3P18627 525 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 UBA7P41226 1012 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 RARRES1P49788 294 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 DSC3Q14574 896 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 EMC2Q15006 297 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 SLC39A14Q15043 492 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 STK38Q15208 465 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 PTPAQ15257 358 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 FAM102BQ5T8I3 360 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 POTEGQ6S5H5 508 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 RHPN2Q8IUC4 686 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 THNSL1Q8IYQ7 743 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 ZNF579Q8NAF0 562 aaKnown RBP14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 SPPL3Q8TCT6 385 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 CALML4Q96GE6 196 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 USP28Q96RU2 1077 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 C1QTNF1Q9BXJ1 281 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 TMEM117Q9H0C3 514 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 IGFLR1Q9H665 355 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 DDX19AQ9NUU7 478 aaKnown RBP14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 PUF60Q9UHX1 559 aaKnown RBP14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 CFAP45Q9UL16 551 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 ATP6V1DQ9Y5K8 247 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 SRPRBQ9Y5M8 271 aaKnown RBP14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 MORC2Q9Y6X9 1032 aaPredicted RBP14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 MYH15Q9Y2K3 1946 aa14.7□□□□□ -0.06
RAB11FIP3-207ENST00000461009 ARID2Q68CP9 1835 aa14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 A0A087WWV3 80 aa14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 FSD2A1L4K1 749 aa14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 CSPG5O95196 566 aa14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 ITGB1P05556 798 aa14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 MARCKSP29966 332 aaPredicted RBP14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 CDC25AP30304 524 aa14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 GATMP50440 423 aa14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 MXD4Q14582 209 aaPredicted RBP14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 ZRSR1Q15695 479 aaKnown RBP14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 PDE12Q6L8Q7 609 aaKnown RBP14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 CABP7Q86V35 215 aa14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 RNF169Q8NCN4 708 aa14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 MCPH1Q8NEM0 835 aa14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 POF1BQ8WVV4 589 aa14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 PRPF31Q8WWY3 499 aaKnown RBP14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 RSPH1Q8WYR4 309 aa14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 TMEM143Q96AN5 459 aa14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 ZNF668Q96K58 619 aaPredicted RBP14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 TYW1Q9NV66 732 aaKnown RBP14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 TFIP11Q9UBB9 837 aaKnown RBP14.69□□□□□ -0.06
RAB11FIP3-207ENST00000461009 A0A0U1RQF3 1178 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 CARNS1A5YM72 827 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 GRXCR2A6NFK2 248 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 PP2D1A8MPX8 630 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 H3BQ06 376 aaPredicted RBP14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 USO1O60763 962 aaKnown RBP14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 YEATS4O95619 227 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 EYA4O95677 639 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 FGFR1P11362 822 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 SSTR3P32745 418 aaPredicted RBP14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 NASPP49321 788 aaPredicted RBP14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 KRT17Q04695 432 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 TFDP1Q14186 410 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 BMS1Q14692 1282 aaKnown RBP14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 ECM1Q16610 540 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 HYIQ5T013 277 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 PADI6Q6TGC4 694 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 ECHDC2Q86YB7 292 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 LRRC43Q8N309 656 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 KRI1Q8N9T8 703 aaKnown RBP14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 RASSF8Q8NHQ8 419 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 NLRP4Q96MN2 994 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 MMTAG2Q9BU76 263 aaKnown RBP14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 MRPL9Q9BYD2 267 aaKnown RBP14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 COL4A3BPQ9Y5P4 624 aa14.68□□□□□ -0.06
RAB11FIP3-207ENST00000461009 A0A087WZ62 844 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 SPTLC2O15270 562 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 FGF18O76093 207 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 BRD1O95696 1058 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 SRGAP2CP0DJJ0 459 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 CYP11B2P19099 503 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 PPM1AP35813 382 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 ANP32AP39687 249 aaKnown RBP14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 TXLNAP40222 546 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 NDUFV1P49821 464 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 NCBP1Q09161 790 aaKnown RBP14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 LAMTOR4Q0VGL1 99 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 HYAL1Q12794 435 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 DRP2Q13474 957 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 PKP1Q13835 747 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 COL19A1Q14993 1142 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 TWF2Q6IBS0 349 aaKnown RBP14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 CATSPER4Q7RTX7 472 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 COLGALT1Q8NBJ5 622 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 LINC00301Q8NCQ3 95 aa14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 FDXACB1Q9BRP7 624 aaPredicted RBP14.67□□□□□ -0.06
RAB11FIP3-207ENST00000461009 CCSER1Q9C0I3 900 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms