RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 SMC1BQ8NDV3 1235 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 LINS1Q8NG48 757 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 KLHDC4Q8TBB5 520 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 STAG1Q8WVM7 1258 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 CELF1Q92879 486 aaKnown RBP5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 FGD4Q96M96 766 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 GPR101Q96P66 508 aaPredicted RBP5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 AARSD1Q9BTE6 412 aaKnown RBP5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 USP44Q9H0E7 712 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 KLHL25Q9H0H3 589 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 NCOA5Q9HCD5 579 aaKnown RBP5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 KLHL42Q9P2K6 505 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 DIS3Q9Y2L1 958 aaKnown RBP5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 MRPS23Q9Y3D9 190 aaKnown RBP5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 KIF13BQ9NQT8 1826 aa5.82□□□□□ -1.48
ATPAF1-203ENST00000460928 SPEF2Q9C093 1822 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 ABCC4O15439 1325 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 PTPRCP08575 1304 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 SH3TC1Q8TE82 1336 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 TRBV23-1A0A0A0MS06 115 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 A0A1W2PQJ5 194 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 H0YIN7 160 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 SNAP23O00161 211 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 GRM8O00222 908 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 PLD2O14939 933 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 PCCAP05165 728 aaPredicted RBP5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 ITGAVP06756 1048 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 CT47B1P0C2W7 299 aaPredicted RBP5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 SRGNP10124 158 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 IFNGR1P15260 489 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 CNGA1P29973 690 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 ANP32AP39687 249 aaKnown RBP5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 KCNC1P48547 511 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 LBX1P52954 281 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 SLURP1P55000 103 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 FOXO4P98177 505 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 PLEKHG6Q3KR16 790 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 FNDC3BQ53EP0 1204 aaKnown RBP5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 PARP10Q53GL7 1025 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 SLC10A5Q5PT55 438 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 YOD1Q5VVQ6 348 aaPredicted RBP5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 EEF1DP3Q658K8 133 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 BICRALQ6AI39 1079 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 PPP1R42Q7Z4L9 355 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 PRRT2Q7Z6L0 340 aaPredicted RBP5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 THNSL2Q86YJ6 484 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 ITPRIPQ8IWB1 547 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 FTSJ3Q8IY81 847 aaKnown RBP5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 ANKRD44Q8N8A2 993 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 FNIP1Q8TF40 1166 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 BRIP1Q9BX63 1249 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 API5Q9BZZ5 524 aaKnown RBP5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 NOL6Q9H6R4 1146 aaKnown RBP5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 GREM2Q9H772 168 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 C9orf78Q9NZ63 289 aaPredicted RBP5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 PRDM4Q9UKN5 801 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 HCFC2Q9Y5Z7 792 aa5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 LRRFIP2Q9Y608 721 aaKnown RBP5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 BRCA1P38398 1863 aaKnown RBP5.81□□□□□ -1.48
ATPAF1-203ENST00000460928 KIF16BQ96L93 1317 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 KLRG2A4D1S0 409 aaPredicted RBP5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 SH3D21A4FU49 640 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 PPM1BO75688 479 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 ALDH1L1O75891 902 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 CD3EP07766 207 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 GLI4P10075 376 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 ATF2P15336 505 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 HMGB2P26583 209 aaKnown RBP5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 RRP1P56182 461 aaKnown RBP5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 PRR5P85299 388 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 NFKB2Q00653 900 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 ZFYVE27Q5T4F4 411 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 LMBR1LQ6UX01 489 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 SAPCD2Q86UD0 394 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 ZNF513Q8N8E2 541 aaPredicted RBP5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 BVESQ8NE79 360 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 TTLL11Q8NHH1 800 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 CHAC2Q8WUX2 184 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 CLUHP3Q96NS8 147 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 MAP7D2Q96T17 732 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 LGR4Q9BXB1 951 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 PUS3Q9BZE2 481 aaKnown RBP5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 NYXQ9GZU5 481 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 GBP3Q9H0R5 595 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 PDCL3Q9H2J4 239 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 ADAM7Q9H2U9 754 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 BICC1Q9H694 974 aaKnown RBP5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 WHRNQ9P202 907 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 APEX2Q9UBZ4 518 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 SUGT1Q9Y2Z0 365 aa5.8□□□□□ -1.48
ATPAF1-203ENST00000460928 A0A0C4DFX4 3053 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 A0A087X0B3 334 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 F8W031 263 aaPredicted RBP5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 NOP56O00567 594 aaKnown RBP5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 AURKAO14965 403 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 IPO8O15397 1037 aaKnown RBP5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 PRODHO43272 600 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 PDE8AO60658 829 aa5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 PLA2G1BP04054 148 aaKnown RBP5.79□□□□□ -1.48
ATPAF1-203ENST00000460928 ADRB1P08588 477 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms