RNA–Protein interactions for RNA: ENST00000460770.1

SYPL1-203, Transcript of synaptophysin like 1, humanhuman

TSL 1 (best)

Gene SYPL1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1-203ENST00000460770 PACSIN3Q9UKS6 424 aa3.97□□□□□ -1.77
SYPL1-203ENST00000460770 FZD1Q9UP38 647 aa3.97□□□□□ -1.77
SYPL1-203ENST00000460770 CLCA2Q9UQC9 943 aa3.97□□□□□ -1.77
SYPL1-203ENST00000460770 HDAC5Q9UQL6 1122 aa3.97□□□□□ -1.77
SYPL1-203ENST00000460770 A0A0A6YYJ9 748 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 KLRG2A4D1S0 409 aaPredicted RBP3.96□□□□□ -1.78
SYPL1-203ENST00000460770 NRP2O60462 931 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 FAM20BO75063 409 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 APOL3O95236 402 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 RAPGEF3O95398 923 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 BMP5P22003 454 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 CD40P25942 277 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 RABGGTBP53611 331 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 WNT3AP56704 352 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 ADAM8P78325 824 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 METTL24Q5JXM2 366 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 PIK3R6Q5UE93 754 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 KIAA1841Q6NSI8 718 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 KCNV1Q6PIU1 500 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 MRGPREQ86SM8 312 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 SYNPOQ8N3V7 929 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 PMFBP1Q8TBY8 1022 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 PROKR1Q8TCW9 393 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 PDCD2LQ9BRP1 358 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 NOL10Q9BSC4 688 aaKnown RBP3.96□□□□□ -1.78
SYPL1-203ENST00000460770 PITHD1Q9GZP4 211 aaPredicted RBP3.96□□□□□ -1.78
SYPL1-203ENST00000460770 GPRC5BQ9NZH0 403 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 USP36Q9P275 1121 aaKnown RBP3.96□□□□□ -1.78
SYPL1-203ENST00000460770 TRPS1Q9UHF7 1281 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 SPO11Q9Y5K1 396 aa3.96□□□□□ -1.78
SYPL1-203ENST00000460770 B3GALT2O43825 422 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 GAS7O60861 476 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 OPHN1O60890 802 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 PRPF6O94906 941 aaKnown RBP3.95□□□□□ -1.78
SYPL1-203ENST00000460770 LAG3P18627 525 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 XPAP23025 273 aaPredicted RBP3.95□□□□□ -1.78
SYPL1-203ENST00000460770 ACAP1Q15027 740 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 CFAP100Q494V2 611 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 TIGD2Q4W5G0 525 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 LRRC55Q6ZSA7 311 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 KANSL1Q7Z3B3 1105 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 FAM83AQ86UY5 434 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 KIF18BQ86Y91 864 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 RPUSD2Q8IZ73 545 aaKnown RBP3.95□□□□□ -1.78
SYPL1-203ENST00000460770 UNC5BQ8IZJ1 945 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 CPT1CQ8TCG5 803 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 PGBD4Q96DM1 585 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 MRFAP1L1Q96HT8 127 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 CPPED1Q9BRF8 314 aaPredicted RBP3.95□□□□□ -1.78
SYPL1-203ENST00000460770 CYP4F11Q9HBI6 524 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 TOMM22Q9NS69 142 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 IFT57Q9NWB7 429 aa3.95□□□□□ -1.78
SYPL1-203ENST00000460770 MAGEC2Q9UBF1 373 aaPredicted RBP3.95□□□□□ -1.78
SYPL1-203ENST00000460770 EIF2B4Q9UI10 523 aaKnown RBP3.95□□□□□ -1.78
SYPL1-203ENST00000460770 CBX4O00257 560 aa3.94□□□□□ -1.78
SYPL1-203ENST00000460770 DVL2O14641 736 aa3.94□□□□□ -1.78
SYPL1-203ENST00000460770 SCAF4O95104 1147 aaKnown RBP3.94□□□□□ -1.78
SYPL1-203ENST00000460770 NUDT3O95989 172 aa3.94□□□□□ -1.78
SYPL1-203ENST00000460770 JMJD7P0C870 316 aa3.94□□□□□ -1.78
SYPL1-203ENST00000460770 HNRNPLP14866 589 aaKnown RBP eCLIP3.94□□□□□ -1.78
SYPL1-203ENST00000460770 PTX3P26022 381 aaPredicted RBP3.94□□□□□ -1.78
SYPL1-203ENST00000460770 NRG3P56975 720 aa3.94□□□□□ -1.78
SYPL1-203ENST00000460770 MYBPC3Q14896 1274 aa3.94□□□□□ -1.78
SYPL1-203ENST00000460770 PLEKHG4Q58EX7 1191 aa3.94□□□□□ -1.78
SYPL1-203ENST00000460770 CCDC178Q5BJE1 867 aa3.94□□□□□ -1.78
SYPL1-203ENST00000460770 PCSK4Q6UW60 755 aa3.94□□□□□ -1.78
SYPL1-203ENST00000460770 CDYL2Q8N8U2 506 aa3.94□□□□□ -1.78
SYPL1-203ENST00000460770 OR5M3Q8NGP4 307 aa3.94□□□□□ -1.78
SYPL1-203ENST00000460770 FERMT2Q96AC1 680 aa3.94□□□□□ -1.78
SYPL1-203ENST00000460770 ELF4Q99607 663 aaPredicted RBP3.94□□□□□ -1.78
SYPL1-203ENST00000460770 MYL10Q9BUA6 226 aa3.94□□□□□ -1.78
SYPL1-203ENST00000460770 OSBPL2Q9H1P3 480 aa3.94□□□□□ -1.78
SYPL1-203ENST00000460770 INTS7Q9NVH2 962 aaKnown RBP3.94□□□□□ -1.78
SYPL1-203ENST00000460770 SORCS3Q9UPU3 1222 aa3.94□□□□□ -1.78
SYPL1-203ENST00000460770 HOXA3O43365 443 aaPredicted RBP3.93□□□□□ -1.78
SYPL1-203ENST00000460770 RFPL3O75679 317 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 ALDH1A2O94788 518 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 KRT4P19013 534 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 SLC9A1P19634 815 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 USP14P54578 494 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 OCRLQ01968 901 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 LRRC32Q14392 662 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 DDB1Q16531 1140 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 STRIP1Q5VSL9 837 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 MBNL2Q5VZF2 373 aaKnown RBP3.93□□□□□ -1.78
SYPL1-203ENST00000460770 CDCA2Q69YH5 1023 aaPredicted RBP3.93□□□□□ -1.78
SYPL1-203ENST00000460770 ESPNLQ6ZVH7 1005 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 RHOUQ7L0Q8 258 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 DCLRE1CQ96SD1 692 aaKnown RBP3.93□□□□□ -1.78
SYPL1-203ENST00000460770 SLC46A2Q9BY10 475 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 POFUT1Q9H488 388 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 TOR3AQ9H497 397 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 RIOX1Q9H6W3 641 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 ZNHIT2Q9UHR6 403 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 PCDHB6Q9Y5E3 794 aa3.93□□□□□ -1.78
SYPL1-203ENST00000460770 GAGE12BA1L429 117 aa3.92□□□□□ -1.78
SYPL1-203ENST00000460770 GAGE12HA6NDE8 117 aa3.92□□□□□ -1.78
SYPL1-203ENST00000460770 PRR5-ARHGAP8B1AHC4 643 aa3.92□□□□□ -1.78
SYPL1-203ENST00000460770 DNAJC6O75061 913 aa3.92□□□□□ -1.78
SYPL1-203ENST00000460770 DNAJC8O75937 253 aaPredicted RBP3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms