RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CALB1P05937 261 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 TADA2BQ86TJ2 420 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 SCYL3Q8IZE3 742 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 PCDHA10Q9Y5I2 948 aa15.81■□□□□ 0.12
PTPRU-205ENST00000460170 MS4A14Q96JA4 679 aa15.8■□□□□ 0.12
PTPRU-205ENST00000460170 TXLNGQ9NUQ3 528 aa15.8■□□□□ 0.12
PTPRU-205ENST00000460170 FBXL5Q9UKA1 691 aa15.8■□□□□ 0.12
PTPRU-205ENST00000460170 NWD1Q149M9 1564 aa15.8■□□□□ 0.12
PTPRU-205ENST00000460170 ZBED1O96006 694 aa15.8■□□□□ 0.12
PTPRU-205ENST00000460170 TBXAS1P24557 533 aaPredicted RBP15.8■□□□□ 0.12
PTPRU-205ENST00000460170 IREB2P48200 963 aaKnown RBP15.8■□□□□ 0.12
PTPRU-205ENST00000460170 KLK7P49862 253 aa15.8■□□□□ 0.12
PTPRU-205ENST00000460170 NCAPHQ15003 741 aa15.8■□□□□ 0.12
PTPRU-205ENST00000460170 E2F5Q15329 346 aa15.8■□□□□ 0.12
PTPRU-205ENST00000460170 CCDC137Q6PK04 289 aaKnown RBP15.8■□□□□ 0.12
PTPRU-205ENST00000460170 MTRQ99707 1265 aa15.8■□□□□ 0.12
PTPRU-205ENST00000460170 PFDN4Q9NQP4 134 aa15.8■□□□□ 0.12
PTPRU-205ENST00000460170 GMNCA6NCL1 334 aa15.8■□□□□ 0.12
PTPRU-205ENST00000460170 ENTPD3O75355 529 aa15.8■□□□□ 0.12
PTPRU-205ENST00000460170 PLS3P13797 630 aa15.8■□□□□ 0.12
PTPRU-205ENST00000460170 PITPNM2Q9BZ72 1349 aa15.8■□□□□ 0.12
PTPRU-205ENST00000460170 DHX34Q14147 1143 aaKnown RBP15.8■□□□□ 0.12
PTPRU-205ENST00000460170 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.8■□□□□ 0.12
PTPRU-205ENST00000460170 PPP1R16BQ96T49 567 aa15.8■□□□□ 0.12
PTPRU-205ENST00000460170 NGRNQ9NPE2 291 aaKnown RBP15.8■□□□□ 0.12
PTPRU-205ENST00000460170 TCRBV5S4A2TA0A5A2 114 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 RPA1P27694 616 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 GALCP54803 685 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 PRPSAP1Q14558 356 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 RPS6KA2Q15349 733 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 TRIM59Q8IWR1 403 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 TTC13Q8NBP0 860 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 NOA1Q8NC60 698 aaKnown RBP15.79■□□□□ 0.12
PTPRU-205ENST00000460170 RNF25Q96BH1 459 aaPredicted RBP15.79■□□□□ 0.12
PTPRU-205ENST00000460170 ZNF302Q9NR11 478 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 APEX2Q9UBZ4 518 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 LCMT1Q9UIC8 334 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 PRR12Q9ULL5 1215 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 FMO5P49326 533 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 ITKQ08881 620 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 LRRC4Q9HBW1 653 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 GINM1Q9NU53 330 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 SPATA31A5Q5VU36 1347 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 SPATA31A7Q8IWB4 1347 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 GGPS1O95749 300 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 ZNF699Q32M78 642 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 PSPC1Q8WXF1 523 aaKnown RBP15.79■□□□□ 0.12
PTPRU-205ENST00000460170 SLC9A1P19634 815 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 RCN2Q14257 317 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 SLC10A5Q5PT55 438 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 GPD1LQ8N335 351 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 GBP7Q8N8V2 638 aaPredicted RBP15.79■□□□□ 0.12
PTPRU-205ENST00000460170 DNAAF3Q8N9W5 541 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 PITPNM3Q9BZ71 974 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 NUF2Q9BZD4 464 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 POLR3FQ9H1D9 316 aaPredicted RBP15.79■□□□□ 0.12
PTPRU-205ENST00000460170 FHOD1Q9Y613 1164 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 AK9Q5TCS8 1911 aa15.79■□□□□ 0.12
PTPRU-205ENST00000460170 WDR91A4D1P6 747 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 MYBP10242 640 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 GNA15P30679 374 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 YWHABP31946 246 aaKnown RBP15.78■□□□□ 0.12
PTPRU-205ENST00000460170 ARL4CP56559 192 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 NAB2Q15742 525 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 STRIP2Q9ULQ0 834 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 ATF5Q9Y2D1 282 aaPredicted RBP15.78■□□□□ 0.12
PTPRU-205ENST00000460170 TACC3Q9Y6A5 838 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 IQANK1A0A1B0GTG1 560 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 RASA4BC9J798 803 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 RASA4O43374 803 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 ECE1P42892 770 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 HSPH1Q92598 858 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 MYBL1P10243 752 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 TFDP2Q14188 446 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 SPARCL1Q14515 664 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 CDO1Q16878 200 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 NBPF3Q9H094 633 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 KCND2Q9NZV8 630 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 PLAGL2Q9UPG8 496 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 RTN2O75298 545 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 TRIM72Q6ZMU5 477 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 RHOT1Q8IXI2 618 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 ZNF710Q8N1W2 664 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 TIPINQ9BVW5 301 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 AFG3L2Q9Y4W6 797 aa15.78■□□□□ 0.12
PTPRU-205ENST00000460170 CYP26A1O43174 497 aa15.77■□□□□ 0.12
PTPRU-205ENST00000460170 CNGA1P29973 690 aa15.77■□□□□ 0.12
PTPRU-205ENST00000460170 ERVK-24P63145 666 aa15.77■□□□□ 0.12
PTPRU-205ENST00000460170 NR1H3Q13133 447 aa15.77■□□□□ 0.12
PTPRU-205ENST00000460170 ZNF568Q3ZCX4 644 aa15.77■□□□□ 0.12
PTPRU-205ENST00000460170 SRRM1Q8IYB3 904 aaKnown RBP15.77■□□□□ 0.12
PTPRU-205ENST00000460170 KBTBD4Q9NVX7 518 aa15.77■□□□□ 0.12
PTPRU-205ENST00000460170 RIMBP3CA6NJZ7 1639 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 RIMBP3BA6NNM3 1639 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 RIMBP3Q9UFD9 1639 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 ABL1P00519 1130 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 CYP2C19P33261 490 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 ASPHQ12797 758 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 ADGRA1Q86SQ6 560 aa15.77■□□□□ 0.11
PTPRU-205ENST00000460170 AP5M1Q9H0R1 490 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms