RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 MAGEC3Q8TD91 643 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 IPO4Q8TEX9 1081 aaKnown RBP6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 CTNNBL1Q8WYA6 563 aaPredicted RBP6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 PGM2Q96G03 612 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 NACC1Q96RE7 527 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 EIF2AK1Q9BQI3 630 aaKnown RBP6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 TIPINQ9BVW5 301 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 STRA6Q9BX79 667 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 WDR11Q9BZH6 1224 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 STMN4Q9H169 189 aaPredicted RBP6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 KDM4CQ9H3R0 1056 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 CCDC134Q9H6E4 229 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 VCPKMTQ9H867 229 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 RRAGCQ9HB90 399 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 TBC1D7Q9P0N9 293 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 GCNT4Q9P109 453 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 PCYOX1Q9UHG3 505 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 RASAL2Q9UJF2 1139 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 FRMD4BQ9Y2L6 1034 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 PCDHB13Q9Y5F0 798 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 SYNGAP1Q96PV0 1343 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 WDR90Q96KV7 1748 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 KIAA1217Q5T5P2 1943 aa6.64□□□□□ -1.35
UBQLN4-202ENST00000459954 IGLV3-22A0A075B6J6 115 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 ESYT3A0FGR9 886 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 ZSCAN5CA6NGD5 496 aaPredicted RBP6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 TMCO5BA8MYB1 307 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 MYO1FO00160 1098 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 KIF3CO14782 793 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 EVI5O60447 810 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 ENTPD3O75355 529 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 PSMD10O75832 226 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 FAM13AO94988 1023 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 GCNT3O95395 438 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 GZMAP12544 262 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 EEF2P13639 858 aaKnown RBP6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 TNFAIP3P21580 790 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 HNRNPH1P31943 449 aaKnown RBP6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 CHRNA3P32297 505 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 SLC16A2P36021 539 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 LIG3P49916 1009 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 ATP1A2P50993 1020 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 PSMC6P62333 389 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 FKBP1BP68106 108 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 ARID5AQ03989 594 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 IFFO1Q0D2I5 559 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 CETN1Q12798 172 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 PABPC4Q13310 644 aaKnown RBP eCLIP6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 PICALMQ13492 652 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 DRAP1Q14919 205 aaPredicted RBP6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 DLGAP5Q15398 846 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 CYP1B1Q16678 543 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 PRR16Q569H4 304 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 C6orf118Q5T5N4 469 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 KCTD16Q68DU8 428 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 OTOP1Q7RTM1 612 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 NIPA1Q7RTP0 329 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 ZNF720Q7Z2F6 126 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 CCDC91Q7Z6B0 441 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 APOBEC3FQ8IUX4 373 aaKnown RBP6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 MICALL2Q8IY33 904 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 CERS5Q8N5B7 392 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 SH2D3CQ8N5H7 860 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 UBL4BQ8N7F7 174 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 SLC17A8Q8NDX2 589 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 LNX1Q8TBB1 728 aaPredicted RBP6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 SLC35G2Q8TBE7 412 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 U2AF1L4Q8WU68 220 aaKnown RBP6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 SLC5A5Q92911 643 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 DCPSQ96C86 337 aaKnown RBP6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 CYFIP2Q96F07 1278 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 GPR101Q96P66 508 aaPredicted RBP6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 FIZ1Q96SL8 496 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 FMO2Q99518 471 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 ERP44Q9BS26 406 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 ROPN1BQ9BZX4 212 aaPredicted RBP6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 WNT8AQ9H1J5 351 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 PABPC3Q9H361 631 aaKnown RBP6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 ST6GALNAC4Q9H4F1 302 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 TMEM206Q9H813 350 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 ROPN1Q9HAT0 212 aaPredicted RBP6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 PARVGQ9HBI0 331 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 MYOZ2Q9NPC6 264 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 ZDHHC18Q9NUE0 388 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 ZMYM2Q9UBW7 1377 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 APEX2Q9UBZ4 518 aa6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 PACSIN2Q9UNF0 486 aaPredicted RBP6.63□□□□□ -1.35
UBQLN4-202ENST00000459954 PARP14Q460N5 1801 aa6.62□□□□□ -1.35
UBQLN4-202ENST00000459954 ZNF541Q9H0D2 1346 aa6.62□□□□□ -1.35
UBQLN4-202ENST00000459954 E7EVH7 732 aa6.62□□□□□ -1.35
UBQLN4-202ENST00000459954 FAM86B1E9PN63 330 aa6.62□□□□□ -1.35
UBQLN4-202ENST00000459954 F5H6K3 240 aa6.62□□□□□ -1.35
UBQLN4-202ENST00000459954 MPHOSPH10O00566 681 aaKnown RBP6.62□□□□□ -1.35
UBQLN4-202ENST00000459954 CHUKO15111 745 aa6.62□□□□□ -1.35
UBQLN4-202ENST00000459954 ASAP2O43150 1006 aa6.62□□□□□ -1.35
UBQLN4-202ENST00000459954 DAPK3O43293 454 aa6.62□□□□□ -1.35
UBQLN4-202ENST00000459954 BUB1BO60566 1050 aaPredicted RBP6.62□□□□□ -1.35
UBQLN4-202ENST00000459954 PHF2O75151 1096 aa6.62□□□□□ -1.35
UBQLN4-202ENST00000459954 RTN2O75298 545 aa6.62□□□□□ -1.35
UBQLN4-202ENST00000459954 RASSF9O75901 435 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms