RNA–Protein interactions for RNA: ENST00000459783.5

MRPL55-223, Transcript of mitochondrial ribosomal protein L55, human

TSL 5 BASIC

Gene MRPL55, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-223	ENST00000459783	CDC42EP1	Q00587	391 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	POU5F1B	Q06416	359 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	GIT2	Q14161	759 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	RRAGB	Q5VZM2	374 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	CATSPER4	Q7RTX7	472 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	SRGAP1	Q7Z6B7	1085 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	ZNF598	Q86UK7	904 aa	Known RBP	11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	CDR2L	Q86X02	465 aa	Predicted RBP	11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	SP7	Q8TDD2	431 aa	Predicted RBP	11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	KIFAP3	Q92845	792 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	SPATA32	Q96LK8	384 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	FIZ1	Q96SL8	496 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	FTHL17	Q9BXU8	183 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	FZD8	Q9H461	694 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	GOLPH3L	Q9H4A5	285 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	AGPAT5	Q9NUQ2	364 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	STK17A	Q9UEE5	414 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	PCDHA11	Q9Y5I1	949 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	GBF1	Q92538	1859 aa		11.36	□□□□□ -0.59
MRPL55-223	ENST00000459783	SZT2	Q5T011	3432 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	INO80B-WBP1	J3KQ70	363 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	IBSP	P21815	317 aa	Predicted RBP	11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	SFPQ	P23246	707 aa	Known RBP eCLIP	11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	NAMPT	P43490	491 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	SARS	P49591	514 aa	Known RBP	11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	ZNF131	P52739	623 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	PEX3	P56589	373 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	TAP1	Q03518	808 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	TFDP1	Q14186	410 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	RASSF8	Q8NHQ8	419 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	STAM	Q92783	540 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	TIFA	Q96CG3	184 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	ZNF689	Q96CS4	500 aa	Predicted RBP	11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	DNAJC19	Q96DA6	116 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	CPB2	Q96IY4	423 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	INO80B	Q9C086	356 aa	Predicted RBP	11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	ARHGAP28	Q9P2N2	729 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	HCST	Q9UBK5	93 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	CCDC39	Q9UFE4	941 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	CIZ1	Q9ULV3	898 aa	Predicted RBP	11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	PIN4	Q9Y237	131 aa	Known RBP	11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	HPSE	Q9Y251	543 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	TTC3	P53804	2025 aa		11.35	□□□□□ -0.59
MRPL55-223	ENST00000459783	FAM237A	A0A1B0GTK4	181 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	DENND3	A2RUS2	1198 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	EPOP	A6NHQ4	379 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	SLC16A4	O15374	487 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	TLL1	O43897	1013 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	DGKI	O75912	1065 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	FGFR1	P11362	822 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	PLS3	P13797	630 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	PFKFB1	P16118	471 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	ARF4	P18085	180 aa	Predicted RBP	11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	STAT6	P42226	847 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	RAB30	Q15771	203 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	CLLU1OS	Q5K130	101 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	NT5DC1	Q5TFE4	455 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	EEF1DP3	Q658K8	133 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	PPP4R3CP	Q6ZMV5	832 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	CCDC73	Q6ZRK6	1079 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	SLC24A5	Q71RS6	500 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	DYM	Q7RTS9	669 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	ECHDC2	Q86YB7	292 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	NPAS4	Q8IUM7	802 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	DHX58	Q96C10	678 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	FAM161B	Q96MY7	647 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	RAD9A	Q99638	391 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	TRAIP	Q9BWF2	469 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	EIF2A	Q9BY44	585 aa	Known RBP	11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	FGFBP2	Q9BYJ0	223 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	KCND2	Q9NZV8	630 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783	ATP6V1D	Q9Y5K8	247 aa		11.34	□□□□□ -0.59
MRPL55-223	ENST00000459783		A0A0U1RQF3	1178 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783		A0A1B0GVL5	298 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	LINC01553	A4QN01	128 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	POLR2D	O15514	142 aa	Known RBP	11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	ACTN4	O43707	911 aa	Known RBP	11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	PRKCB	P05771	671 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	CMA1	P23946	247 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	CASP1	P29466	404 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	TXLNA	P40222	546 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	GRIN2C	Q14957	1233 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	FAM187B	Q17R55	369 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	LONRF3	Q496Y0	759 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	ODR4	Q5SWX8	454 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	ADAL	Q6DHV7	355 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	GRAMD1C	Q8IYS0	662 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	SMG8	Q8ND04	991 aa	Known RBP	11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	TMEM161B	Q8NDZ6	487 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	DEPTOR	Q8TB45	409 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	SPIRE2	Q8WWL2	714 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	DDX12P	Q92771	950 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	LPP	Q93052	612 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	DRC1	Q96MC2	740 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	GUCD1	Q96NT3	240 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	NTPCR	Q9BSD7	190 aa	Known RBP	11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	TIPIN	Q9BVW5	301 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	SCAND2P	Q9GZW5	306 aa	Predicted RBP	11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	RNF39	Q9H2S5	420 aa		11.33	□□□□□ -0.6
MRPL55-223	ENST00000459783	SEMA6B	Q9H3T3	888 aa		11.33	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms