RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 NPY5RQ15761 445 aa24.13■■□□□ 1.45
CPNE1-220ENST00000458038 PPP4R3AQ6IN85 833 aa24.13■■□□□ 1.45
CPNE1-220ENST00000458038 ANO5Q75V66 913 aa24.13■■□□□ 1.45
CPNE1-220ENST00000458038 ZBTB33Q86T24 672 aa24.13■■□□□ 1.45
CPNE1-220ENST00000458038 DDX53Q86TM3 631 aaKnown RBP24.13■■□□□ 1.45
CPNE1-220ENST00000458038 SLC7A3Q8WY07 619 aa24.13■■□□□ 1.45
CPNE1-220ENST00000458038 NAP1L4Q99733 375 aaKnown RBP24.13■■□□□ 1.45
CPNE1-220ENST00000458038 IRF2BPLQ9H1B7 796 aa24.13■■□□□ 1.45
CPNE1-220ENST00000458038 CYP26B1Q9NR63 512 aa24.13■■□□□ 1.45
CPNE1-220ENST00000458038 P4HBP07237 508 aaKnown RBP24.12■■□□□ 1.45
CPNE1-220ENST00000458038 RNASELQ05823 741 aaKnown RBP24.12■■□□□ 1.45
CPNE1-220ENST00000458038 INF2Q27J81 1249 aa24.12■■□□□ 1.45
CPNE1-220ENST00000458038 UBALD2Q8IYN6 164 aa24.12■■□□□ 1.45
CPNE1-220ENST00000458038 ASIC4Q96FT7 647 aa24.12■■□□□ 1.45
CPNE1-220ENST00000458038 IGSF21Q96ID5 467 aa24.12■■□□□ 1.45
CPNE1-220ENST00000458038 APOL5Q9BWW9 433 aa24.12■■□□□ 1.45
CPNE1-220ENST00000458038 ZBP1Q9H171 429 aa24.12■■□□□ 1.45
CPNE1-220ENST00000458038 CCDC194A0A1B0GVG4 234 aa24.11■■□□□ 1.45
CPNE1-220ENST00000458038 TMEM150BA6NC51 233 aa24.11■■□□□ 1.45
CPNE1-220ENST00000458038 NT5C1B-RDH14C9J2C7 533 aa24.11■■□□□ 1.45
CPNE1-220ENST00000458038 TBX3O15119 743 aa24.11■■□□□ 1.45
CPNE1-220ENST00000458038 GAS2O43903 313 aaKnown RBP24.11■■□□□ 1.45
CPNE1-220ENST00000458038 CTSAP10619 480 aa24.11■■□□□ 1.45
CPNE1-220ENST00000458038 NUBP1P53384 320 aa24.11■■□□□ 1.45
CPNE1-220ENST00000458038 LETM2Q2VYF4 491 aa24.11■■□□□ 1.45
CPNE1-220ENST00000458038 SRGAP1Q7Z6B7 1085 aa24.11■■□□□ 1.45
CPNE1-220ENST00000458038 PPFIBP1Q86W92 1011 aa24.11■■□□□ 1.45
CPNE1-220ENST00000458038 NLRP4Q96MN2 994 aa24.11■■□□□ 1.45
CPNE1-220ENST00000458038 SH2D3AQ9BRG2 576 aa24.11■■□□□ 1.45
CPNE1-220ENST00000458038 SLKQ9H2G2 1235 aaPredicted RBP24.11■■□□□ 1.45
CPNE1-220ENST00000458038 KCNMB3Q9NPA1 279 aa24.11■■□□□ 1.45
CPNE1-220ENST00000458038 TBC1D13Q9NVG8 400 aa24.11■■□□□ 1.45
CPNE1-220ENST00000458038 KANSL3Q9P2N6 904 aa24.11■■□□□ 1.45
CPNE1-220ENST00000458038 COL4A3BPQ9Y5P4 624 aa24.11■■□□□ 1.45
CPNE1-220ENST00000458038 OFD1O75665 1012 aa24.1■■□□□ 1.45
CPNE1-220ENST00000458038 GALTP07902 379 aa24.1■■□□□ 1.45
CPNE1-220ENST00000458038 CA8P35219 290 aa24.1■■□□□ 1.45
CPNE1-220ENST00000458038 RFC5P40937 340 aa24.1■■□□□ 1.45
CPNE1-220ENST00000458038 IER5LQ5T953 404 aa24.1■■□□□ 1.45
CPNE1-220ENST00000458038 NEK8Q86SG6 692 aa24.1■■□□□ 1.45
CPNE1-220ENST00000458038 PRSS33Q8NF86 280 aa24.1■■□□□ 1.45
CPNE1-220ENST00000458038 URGCPQ8TCY9 931 aa24.1■■□□□ 1.45
CPNE1-220ENST00000458038 PHF20Q9BVI0 1012 aa24.1■■□□□ 1.45
CPNE1-220ENST00000458038 NRDE2Q9H7Z3 1164 aa24.1■■□□□ 1.45
CPNE1-220ENST00000458038 IFT122Q9HBG6 1241 aa24.1■■□□□ 1.45
CPNE1-220ENST00000458038 TSHZ2Q9NRE2 1034 aa24.1■■□□□ 1.45
CPNE1-220ENST00000458038 AGPAT5Q9NUQ2 364 aa24.1■■□□□ 1.45
CPNE1-220ENST00000458038 KMT2EQ8IZD2 1858 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.09■■□□□ 1.45
CPNE1-220ENST00000458038 EML1O00423 815 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 ASAP2O43150 1006 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 SLC37A4O43826 429 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 STK3Q13188 491 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 ATAT1Q5SQI0 421 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 OTUD6AQ7L8S5 288 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 PLCD3Q8N3E9 789 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 PSPC1Q8WXF1 523 aaKnown RBP24.09■■□□□ 1.45
CPNE1-220ENST00000458038 LPPQ93052 612 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 CEP170P1Q96L14 293 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 AIFM3Q96NN9 605 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 POMKQ9H5K3 350 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 DHX33Q9H6R0 707 aaKnown RBP24.09■■□□□ 1.45
CPNE1-220ENST00000458038 PDRG1Q9NUG6 133 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 VAV3Q9UKW4 847 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 SORCS3Q9UPU3 1222 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 PCDHB2Q9Y5E7 798 aa24.09■■□□□ 1.45
CPNE1-220ENST00000458038 MTMR3Q13615 1198 aa24.08■■□□□ 1.45
CPNE1-220ENST00000458038 PCBP1Q15365 356 aaKnown RBP eCLIP24.08■■□□□ 1.452e-19■□□□□ 8.2
CPNE1-220ENST00000458038 PLA2G4FQ68DD2 849 aa24.08■■□□□ 1.45
CPNE1-220ENST00000458038 MRPL10Q7Z7H8 261 aaKnown RBP24.08■■□□□ 1.45
CPNE1-220ENST00000458038 KSR1Q8IVT5 923 aa24.08■■□□□ 1.45
CPNE1-220ENST00000458038 C4orf19Q8IY42 314 aa24.08■■□□□ 1.45
CPNE1-220ENST00000458038 KREMEN2Q8NCW0 462 aa24.08■■□□□ 1.45
CPNE1-220ENST00000458038 TCP11Q8WWU5 503 aa24.08■■□□□ 1.45
CPNE1-220ENST00000458038 PRPF31Q8WWY3 499 aaKnown RBP24.08■■□□□ 1.45
CPNE1-220ENST00000458038 USTQ9Y2C2 406 aa24.08■■□□□ 1.45
CPNE1-220ENST00000458038 INPP5FQ9Y2H2 1132 aa24.08■■□□□ 1.45
CPNE1-220ENST00000458038 STK36Q9NRP7 1315 aa24.08■■□□□ 1.44
CPNE1-220ENST00000458038 CNTNAP2Q9UHC6 1331 aa24.08■■□□□ 1.44
CPNE1-220ENST00000458038 AVPR2P30518 371 aa24.07■■□□□ 1.44
CPNE1-220ENST00000458038 NPEPPSP55786 919 aa24.07■■□□□ 1.44
CPNE1-220ENST00000458038 EPHA7Q15375 998 aa24.07■■□□□ 1.44
CPNE1-220ENST00000458038 KIAA1841Q6NSI8 718 aa24.07■■□□□ 1.44
CPNE1-220ENST00000458038 ZDHHC14Q8IZN3 488 aa24.07■■□□□ 1.44
CPNE1-220ENST00000458038 CNNM3Q8NE01 707 aa24.07■■□□□ 1.44
CPNE1-220ENST00000458038 UBN1Q9NPG3 1134 aa24.07■■□□□ 1.44
CPNE1-220ENST00000458038 KCNJ14Q9UNX9 436 aa24.07■■□□□ 1.44
CPNE1-220ENST00000458038 MARCH6O60337 910 aa24.06■■□□□ 1.44
CPNE1-220ENST00000458038 ALDH2P05091 517 aa24.06■■□□□ 1.44
CPNE1-220ENST00000458038 RARS2Q5T160 578 aaKnown RBP24.06■■□□□ 1.44
CPNE1-220ENST00000458038 TMEM173Q86WV6 379 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-220ENST00000458038 SLFN12Q8IYM2 578 aa24.06■■□□□ 1.44
CPNE1-220ENST00000458038 SLC22A17Q8WUG5 538 aa24.06■■□□□ 1.44
CPNE1-220ENST00000458038 FAM193BQ96PV7 902 aaPredicted RBP24.06■■□□□ 1.44
CPNE1-220ENST00000458038 LARP6Q9BRS8 491 aaKnown RBP24.06■■□□□ 1.44
CPNE1-220ENST00000458038 TMEM175Q9BSA9 504 aa24.06■■□□□ 1.44
CPNE1-220ENST00000458038 EMILIN2Q9BXX0 1053 aa24.06■■□□□ 1.44
CPNE1-220ENST00000458038 C2CD4DB7Z1M9 353 aa24.05■■□□□ 1.44
CPNE1-220ENST00000458038 CCNT1O60563 726 aaKnown RBP24.05■■□□□ 1.44
CPNE1-220ENST00000458038 BAG4O95429 457 aaKnown RBP24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms