RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 KREMEN2Q8NCW0 462 aa17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 SLC7A3Q8WY07 619 aa17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 CEP170P1Q96L14 293 aa17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 FDXACB1Q9BRP7 624 aaPredicted RBP17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 INO80BQ9C086 356 aaPredicted RBP17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 ENTPD7Q9NQZ7 604 aa17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 CYP26B1Q9NR63 512 aa17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 BMP2KQ9NSY1 1161 aaPredicted RBP17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 PIN4Q9Y237 131 aaKnown RBP17.63■□□□□ 0.41
CHCHD3-204ENST00000457942 FAM205CA6NFA0 338 aa17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 TBX3O15119 743 aa17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 STBD1O95210 358 aa17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 LARGE1O95461 756 aa17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 P4HBP07237 508 aaKnown RBP17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 PBX3P40426 434 aa17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 ANKRD54Q6NXT1 300 aa17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 CATSPER4Q7RTX7 472 aa17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 ZNF410Q86VK4 478 aa17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 TMEM105Q8N8V8 129 aa17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 HELQQ8TDG4 1101 aa17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 RIPOR3Q96MK2 946 aa17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 ZNF558Q96NG5 402 aa17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 CASD1Q96PB1 797 aa17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 LXNQ9BS40 222 aa17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 CWH43Q9H720 699 aa17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 PUF60Q9UHX1 559 aaKnown RBP17.62■□□□□ 0.41
CHCHD3-204ENST00000457942 ARID2Q68CP9 1835 aa17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 IGKV6-21A0A0C4DH24 114 aa17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 PRR23AA6NEV1 266 aa17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 GALR2O43603 387 aaPredicted RBP17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 BRD1O95696 1058 aa17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 SRGAP2BP0DMP2 458 aa17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 CA8P35219 290 aa17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 PPM1AP35813 382 aa17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 NPEPPSP55786 919 aa17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 EARS2Q5JPH6 523 aaKnown RBP17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 KCNT2Q6UVM3 1135 aa17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 KSR1Q8IVT5 923 aa17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 SLFN12Q8IYM2 578 aa17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 CCDC43Q96MW1 224 aaKnown RBP17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 TCF25Q9BQ70 676 aa17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 MRPL9Q9BYD2 267 aaKnown RBP17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 RNF19AQ9NV58 838 aa17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 COL4A3BPQ9Y5P4 624 aa17.61■□□□□ 0.41
CHCHD3-204ENST00000457942 A0A0U1RQF3 1178 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 HIDE1A8MVS5 230 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 EOMESO95936 686 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 WEE2P0C1S8 567 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 YWHABP31946 246 aaKnown RBP17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 CYP4A11Q02928 519 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 KRT17Q04695 432 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 EPHA7Q15375 998 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 LONRF3Q496Y0 759 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 CLLU1OSQ5K130 101 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 SYCE2Q6PIF2 218 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 OTUD6AQ7L8S5 288 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 FRMD5Q7Z6J6 570 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 EXOC8Q8IYI6 725 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 NSUN7Q8NE18 718 aaKnown RBP17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 MRPS27Q92552 414 aaKnown RBP17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 HAS1Q92839 578 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 DYDC2Q96IM9 177 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 CEP89Q96ST8 783 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 IRF2BPLQ9H1B7 796 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 S1PR5Q9H228 398 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 CHST12Q9NRB3 414 aa17.6■□□□□ 0.41
CHCHD3-204ENST00000457942 WDR87Q6ZQQ6 2873 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 FSD2A1L4K1 749 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 C2CD4DB7Z1M9 353 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 FSCN2O14926 492 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 JAK2O60674 1132 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 ASGR2P07307 311 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 SKIP12755 728 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 FDPSP14324 419 aaKnown RBP17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 RFC5P40937 340 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 MTMR3Q13615 1198 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 CTTNQ14247 550 aaKnown RBP17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 CALCRLQ16602 461 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 XKR9Q5GH70 373 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 PDE12Q6L8Q7 609 aaKnown RBP17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 LRRC55Q6ZSA7 311 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 DIS3L2Q8IYB7 885 aaKnown RBP17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 PSPC1Q8WXF1 523 aaKnown RBP17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 TMEM143Q96AN5 459 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 CDCA3Q99618 268 aaPredicted RBP17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 POMKQ9H5K3 350 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 ZSWIM4Q9H7M6 989 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 SPG21Q9NZD8 308 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 RGL1Q9NZL6 768 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 WRAP73Q9P2S5 460 aaPredicted RBP17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 PPME1Q9Y570 386 aa17.59■□□□□ 0.41
CHCHD3-204ENST00000457942 DCHS1Q96JQ0 3298 aa17.58■□□□□ 0.41
CHCHD3-204ENST00000457942 SRGAP2CP0DJJ0 459 aa17.58■□□□□ 0.4
CHCHD3-204ENST00000457942 PHKA2P46019 1235 aa17.58■□□□□ 0.4
CHCHD3-204ENST00000457942 PLCB3Q01970 1234 aa17.58■□□□□ 0.4
CHCHD3-204ENST00000457942 EMC2Q15006 297 aa17.58■□□□□ 0.4
CHCHD3-204ENST00000457942 TMC7Q7Z402 723 aa17.58■□□□□ 0.4
CHCHD3-204ENST00000457942 ZNF598Q86UK7 904 aaKnown RBP17.58■□□□□ 0.4
CHCHD3-204ENST00000457942 TPH2Q8IWU9 490 aa17.58■□□□□ 0.4
CHCHD3-204ENST00000457942 C4orf19Q8IY42 314 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms