RNA–Protein interactions for RNA: ENST00000457823.6

SMARCAD1-204, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-204ENST00000457823 STRIP1Q5VSL9 837 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 FAM47EQ6ZV65 393 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 TRIM59Q8IWR1 403 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 SCN4BQ8IWT1 228 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 TTC17Q96AE7 1141 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 ZNF512BQ96KM6 892 aaPredicted RBP12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 EDEM3Q9BZQ6 932 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 Q9H521 79 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 LIMA1Q9UHB6 759 aaKnown RBP12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 STRIP2Q9ULQ0 834 aa12.53□□□□□ -0.4
SMARCAD1-204ENST00000457823 ATP1A1P05023 1023 aaKnown RBP12.52□□□□□ -0.4
SMARCAD1-204ENST00000457823 NCF2P19878 526 aaPredicted RBP12.52□□□□□ -0.4
SMARCAD1-204ENST00000457823 TBXAS1P24557 533 aaPredicted RBP12.52□□□□□ -0.4
SMARCAD1-204ENST00000457823 TMCO4Q5TGY1 634 aa12.52□□□□□ -0.4
SMARCAD1-204ENST00000457823 PDXDC1Q6P996 788 aa12.52□□□□□ -0.4
SMARCAD1-204ENST00000457823 VPS39Q96JC1 886 aa12.52□□□□□ -0.4
SMARCAD1-204ENST00000457823 UBN1Q9NPG3 1134 aa12.52□□□□□ -0.4
SMARCAD1-204ENST00000457823 KLHL8Q9P2G9 620 aaPredicted RBP12.52□□□□□ -0.4
SMARCAD1-204ENST00000457823 TTC4O95801 387 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 MMEP08473 750 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 RASA1P20936 1047 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 TERF2Q15554 542 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 MAML1Q92585 1016 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 SPATA33Q96N06 139 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 ATP8B3O60423 1300 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 C1orf167Q5SNV9 1468 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 ESRRAP11474 423 aaPredicted RBP12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 KPNA2P52292 529 aaKnown RBP12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 HP1BP3Q5SSJ5 553 aaPredicted RBP12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 FRMD5Q7Z6J6 570 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 APOBEC3FQ8IUX4 373 aaKnown RBP12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 PRPF31Q8WWY3 499 aaKnown RBP12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 TTC1Q99614 292 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.52□□□□□ -0.411e-10■■■□□ 16
SMARCAD1-204ENST00000457823 MRPL4Q9BYD3 311 aaKnown RBP12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 KIF9Q9HAQ2 790 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 FAM217BQ9NTX9 383 aaPredicted RBP12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 RNF181Q9P0P0 153 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 KIF3CO14782 793 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 FXR1P51114 621 aaKnown RBP eCLIP12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 BAATQ14032 418 aaPredicted RBP12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 SPATA4Q8NEY3 305 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 SDCCAG3Q96C92 435 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 C2orf40Q9H1Z8 148 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 MLXIPLQ9NP71 852 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 SLC9A2Q9UBY0 812 aa12.52□□□□□ -0.41
SMARCAD1-204ENST00000457823 GOLGA8QA0A0J9YX86 632 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 A0A1B0GTH6 734 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 GOLGA8OA6NCC3 632 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 GOLGA8NF8WBI6 632 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 CLGNO14967 610 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 CFLARO15519 480 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 NTSR2O95665 410 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 GNAT1P11488 350 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 SOX5P35711 763 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 HNRNPH2P55795 449 aaKnown RBP12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 MAGOHP61326 146 aaKnown RBP12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 ITPK1Q13572 414 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 DUOXA2Q1HG44 320 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 CDC42EP5Q6NZY7 148 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 BEST2Q8NFU1 509 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 RFFLQ8WZ73 363 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 SPDL1Q96EA4 605 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 USH1CQ9Y6N9 552 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 M0QYV0 167 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 YWHABP31946 246 aaKnown RBP12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 TMPRSS15P98073 1019 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 SPARCL1Q14515 664 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 E4F1Q66K89 784 aaPredicted RBP12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 FBXO33Q7Z6M2 555 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 GPD1LQ8N335 351 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 RNF149Q8NC42 400 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 PDZD8Q8NEN9 1154 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 AGPAT5Q9NUQ2 364 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 ZNRF3Q9ULT6 936 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 MYMKA6NI61 221 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 COPEO14579 308 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 CYP26A1O43174 497 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 CTDNEP1O95476 244 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 STAT5BP51692 787 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 DPYDQ12882 1025 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 MTMR2Q13614 643 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 COG2Q14746 738 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 TBC1D1Q86TI0 1168 aaPredicted RBP12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 NCAPGQ9BPX3 1015 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 ARHGEF40Q8TER5 1519 aa12.51□□□□□ -0.41
SMARCAD1-204ENST00000457823 A0A0G2JND7 137 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 SPDYE2BA6NHP3 402 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 SPDYE6P0CI01 402 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 PDHBP11177 359 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 SSTR3P32745 418 aaPredicted RBP12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 TMEM60Q9H2L4 133 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 TXLNGQ9NUQ3 528 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 NYAP2Q9P242 653 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 LAMC1P11047 1609 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 KRT38O76015 456 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 RHOBTB3O94955 611 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 GCKP35557 465 aa12.5□□□□□ -0.41
SMARCAD1-204ENST00000457823 HDLBPQ00341 1268 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms