RNA–Protein interactions for RNA: ENST00000456932.6

CSPG4P10-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 10, humanhuman

BASIC

Gene CSPG4P10, Length 4,817 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P10-201ENST00000456932 TRIM49CP0CI26 452 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 TMOD1P28289 359 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 GLE1Q53GS7 698 aaKnown RBP12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 APOBEC3FQ8IUX4 373 aaKnown RBP12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 AFAP1L2Q8N4X5 818 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 GMCL1Q96IK5 515 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 PNMA5Q96PV4 448 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 PSMD1Q99460 953 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 PLAGL2Q9UPG8 496 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 AGTPBP1Q9UPW5 1226 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 ROBO1Q9Y6N7 1651 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 KRT19P08727 400 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 NSFP46459 744 aaKnown RBP12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 GCLMP48507 274 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 SLC18A3Q16572 532 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 FAM160B1Q5W0V3 765 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 SCYL3Q8IZE3 742 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 RILPQ96NA2 401 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 ZNF185O15231 689 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 SLC16A4O15374 487 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 BPIFB4P59827 614 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 DRAP1Q14919 205 aaPredicted RBP12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 FIGNQ5HY92 759 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 GSPT2Q8IYD1 628 aaKnown RBP12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 HAUS1Q96CS2 278 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 AP1M1Q9BXS5 423 aa12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 INTS2Q9H0H0 1204 aaKnown RBP12.12□□□□□ -0.47
CSPG4P10-201ENST00000456932 NUP188Q5SRE5 1749 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 hCG_2014768A0A024R1R8 64 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 PDHA1P08559 390 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 RASA3Q14644 834 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 SLMAPQ14BN4 828 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 SNRNP48Q6IEG0 339 aaKnown RBP12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 SYT2Q8N9I0 419 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 GMCL1P1Q8NEA9 526 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 THOC1Q96FV9 657 aaKnown RBP12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 WRNIP1Q96S55 665 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 TMEM39BQ9GZU3 492 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 ACTN1P12814 892 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 SREBF1P36956 1147 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 CERS5Q8N5B7 392 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 DUSP9Q99956 384 aaKnown RBP12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 Q9H521 79 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 PHLPP1O60346 1717 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 ROBO3Q96MS0 1386 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 LRRC10BA6NIK2 292 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 SFNP31947 248 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 ECE1P42892 770 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 RSPH3Q86UC2 560 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 CXorf38Q8TB03 319 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 ACER1Q8TDN7 264 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 CALR3Q96L12 384 aaKnown RBP12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 POLR3CQ9BUI4 534 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 NFU1Q9UMS0 254 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 SPECC1L-ADORA2AF8WAN1 911 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 WDR46O15213 610 aaKnown RBP12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 PLEKP08567 350 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 UCHL3P15374 230 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 H2AFXP16104 143 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 NBPF9Q3BBW0 867 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 RHOT2Q8IXI1 618 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 SPATA4Q8NEY3 305 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 GABPB2Q8TAK5 448 aaPredicted RBP12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 MAGOHBQ96A72 148 aaKnown RBP12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 KLC4Q9NSK0 619 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 BLOC1S4Q9NUP1 217 aa12.11□□□□□ -0.47
CSPG4P10-201ENST00000456932 TARSL2A2RTX5 802 aaKnown RBP12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 DNAJC8O75937 253 aaPredicted RBP12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 ABCD1P33897 745 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 VAMP7P51809 220 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 PSMC5P62195 406 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 LRRC43Q8N309 656 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 KCTD17Q8N5Z5 321 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 PACSIN2Q9UNF0 486 aaPredicted RBP12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 DAAM1Q9Y4D1 1078 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 ZHX2Q9Y6X8 837 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 I3L4J1 428 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 SLC15A2Q16348 729 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 METTL13Q8N6R0 699 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 CCHCR1Q8TD31 782 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 LPAR1Q92633 364 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 FAM81BQ96LP2 452 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 MTMR9Q96QG7 549 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 NUDT12Q9BQG2 462 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 MARF1Q9Y4F3 1742 aaKnown RBP12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 CCDC188H7C350 402 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 SLC9A1P19634 815 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 HOXD10P28358 340 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 ALS2CLQ60I27 953 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 ZFPM1Q8IX07 1006 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 NOA1Q8NC60 698 aaKnown RBP12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 MCPH1Q8NEM0 835 aa12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 NSUN6Q8TEA1 469 aaKnown RBP12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 N4BP2Q86UW6 1770 aaPredicted RBP12.1□□□□□ -0.47
CSPG4P10-201ENST00000456932 MYO1FO00160 1098 aa12.09□□□□□ -0.47
CSPG4P10-201ENST00000456932 MX2P20592 715 aa12.09□□□□□ -0.47
CSPG4P10-201ENST00000456932 YWHAEP62258 255 aaKnown RBP12.09□□□□□ -0.47
CSPG4P10-201ENST00000456932 TMEM119Q4V9L6 283 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms