RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 FAM153BP0C7A2 387 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 MCCD1P59942 119 aaPredicted RBP19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 RPS6P62753 249 aaKnown RBP19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 GTF2BQ00403 316 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 FAM153CQ494X1 144 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 C1orf220Q5T0J3 134 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 C4orf19Q8IY42 314 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 HES6Q96HZ4 224 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 CALR3Q96L12 384 aaKnown RBP19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 FAM153AQ9UHL3 310 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 ASTN2O75129 1339 aaPredicted RBP19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 FOXN3O00409 490 aaPredicted RBP19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 P4HA2O15460 535 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 CTNND1O60716 968 aaKnown RBP19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 EIF2AK2P19525 551 aaKnown RBP19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 YWHABP31946 246 aaKnown RBP19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 VAMP7P51809 220 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 ZNF280AP59817 542 aaPredicted RBP19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 PPATQ06203 517 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 PPP3CAQ08209 521 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 UGCGQ16739 394 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 MREGQ8N565 214 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.94■□□□□ 0.782e-10■■□□□ 13.4
SEMA3B-209ENST00000456560 CBWD1Q9BRT8 395 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 TIPINQ9BVW5 301 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 HOMER2Q9NSB8 354 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 SAMM50Q9Y512 469 aa19.94■□□□□ 0.78
SEMA3B-209ENST00000456560 EMSYQ7Z589 1322 aa19.93■□□□□ 0.78
SEMA3B-209ENST00000456560 PGRMC1O00264 195 aaKnown RBP19.93■□□□□ 0.78
SEMA3B-209ENST00000456560 MAPK13O15264 365 aa19.93■□□□□ 0.78
SEMA3B-209ENST00000456560 OPA1O60313 960 aa19.93■□□□□ 0.78
SEMA3B-209ENST00000456560 EPC2Q52LR7 807 aa19.93■□□□□ 0.78
SEMA3B-209ENST00000456560 HAUS6Q7Z4H7 955 aa19.93■□□□□ 0.78
SEMA3B-209ENST00000456560 KLHL7Q8IXQ5 586 aa19.93■□□□□ 0.78
SEMA3B-209ENST00000456560 SLC35G2Q8TBE7 412 aa19.93■□□□□ 0.78
SEMA3B-209ENST00000456560 IFT81Q8WYA0 676 aa19.93■□□□□ 0.78
SEMA3B-209ENST00000456560 RFFLQ8WZ73 363 aa19.93■□□□□ 0.78
SEMA3B-209ENST00000456560 GOLGA8KD6RF30 607 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 NFKBIEO00221 500 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 ATP9AO75110 1047 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 TNFAIP3P21580 790 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 SNRPFP62306 86 aaKnown RBP19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 TRADDQ15628 312 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 PTPROQ16827 1216 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 ARHGAP44Q17R89 818 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 DAAM2Q86T65 1068 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 IQCKQ8N0W5 287 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 EIF1ADQ8N9N8 165 aaKnown RBP19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 PLEKHA4Q9H4M7 779 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 OSGEPQ9NPF4 335 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 TMCO5BA8MYB1 307 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 BACH1O14867 736 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 BUB1BO60566 1050 aaPredicted RBP19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 HSF2BPO75031 334 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 EGFRP00533 1210 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 VCAM1P19320 739 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 MAGEA9P43362 315 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 NCKAP1LP55160 1127 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 XXYLT1Q8NBI6 393 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 FAM76AQ8TAV0 307 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 PLEKHO2Q8TD55 490 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 VTI1AQ96AJ9 217 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 PDCD2LQ9BRP1 358 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 EFCC1Q9HA90 598 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 HSPBP1Q9NZL4 362 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 NOC2LQ9Y3T9 749 aaKnown RBP19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 IGSF9BQ9UPX0 1349 aa19.92■□□□□ 0.78
SEMA3B-209ENST00000456560 TMEM150BA6NC51 233 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 GOLGA6CA6NDK9 693 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 PMM2O15305 246 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 PPFIA4O75335 1185 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 CCNE2O96020 404 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 GOLGA6DP0CG33 693 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 JAK3P52333 1124 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 PSMC5P62195 406 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 TNFAIP1Q13829 316 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 ARHGEF19Q8IW93 802 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 ZSWIM2Q8NEG5 633 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 WHAMMQ8TF30 809 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 AGPAT1Q99943 283 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 TAOK3Q9H2K8 898 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 PXMP2Q9NR77 195 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 GOLGA6AQ9NYA3 693 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 AMFRQ9UKV5 643 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 PNMA2Q9UL42 364 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 USP20Q9Y2K6 914 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 CCDC188H7C350 402 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 MYCLP12524 364 aaPredicted RBP19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 PALB2Q86YC2 1186 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 CTNNBL1Q8WYA6 563 aaPredicted RBP19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 ZIM3Q96PE6 472 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 SH2D3AQ9BRG2 576 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 ISCUQ9H1K1 167 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 UBE2TQ9NPD8 197 aaPredicted RBP19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 ANKEF1Q9NU02 776 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 TAS2R14Q9NYV8 317 aa19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 TTC7AQ9ULT0 858 aaPredicted RBP19.91■□□□□ 0.78
SEMA3B-209ENST00000456560 SHOX2O60902 331 aaPredicted RBP19.9■□□□□ 0.78
SEMA3B-209ENST00000456560 ZBED4O75132 1171 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms