RNA–Protein interactions for RNA: ENST00000456542.5

SP140-207, Transcript of SP140 nuclear body protein, humanhuman

TSL 4

Gene SP140, Length 580 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-207ENST00000456542 SLC12A3P55017 1021 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 MBTD1Q05BQ5 628 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 KARSQ15046 597 aaKnown RBP9.41□□□□□ -0.9
SP140-207ENST00000456542 MAEAQ7L5Y9 396 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 RASSF8Q8NHQ8 419 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 KCNG4Q8TDN1 519 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 LARP4BQ92615 738 aaKnown RBP9.41□□□□□ -0.9
SP140-207ENST00000456542 SYMPKQ92797 1274 aaKnown RBP9.41□□□□□ -0.9
SP140-207ENST00000456542 EPSTI1Q96J88 318 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 IFT74Q96LB3 600 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 PRIMPOLQ96LW4 560 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 DRC1Q96MC2 740 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 GUCD1Q96NT3 240 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 SAMD11Q96NU1 681 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 CLIC6Q96NY7 704 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 TGS1Q96RS0 853 aaKnown RBP9.41□□□□□ -0.9
SP140-207ENST00000456542 RUSC1Q9BVN2 902 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 C2orf40Q9H1Z8 148 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 BLOC1S4Q9NUP1 217 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 TFIP11Q9UBB9 837 aaKnown RBP9.41□□□□□ -0.9
SP140-207ENST00000456542 STK17AQ9UEE5 414 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 DAXXQ9UER7 740 aaPredicted RBP9.41□□□□□ -0.9
SP140-207ENST00000456542 LRFN2Q9ULH4 789 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 PIN4Q9Y237 131 aaKnown RBP9.41□□□□□ -0.9
SP140-207ENST00000456542 ZDHHC9Q9Y397 364 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 PCDHB7Q9Y5E2 793 aa9.41□□□□□ -0.9
SP140-207ENST00000456542 PHLPP2Q6ZVD8 1323 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 COL4A4P53420 1690 aaPredicted RBP9.4□□□□□ -0.9
SP140-207ENST00000456542 HOXA2O43364 376 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 TSPAN1O60635 241 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 CUTAO60888 179 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 ZNF623O75123 536 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 HIP1RO75146 1068 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 ARHGEF15O94989 841 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 EOMESO95936 686 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 SSBP05455 408 aaKnown RBP eCLIP9.4□□□□□ -0.9
SP140-207ENST00000456542 SKIP12755 728 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 HOXA11P31270 313 aaPredicted RBP9.4□□□□□ -0.9
SP140-207ENST00000456542 ERVK-21P61565 698 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 DNM1Q05193 864 aaKnown RBP9.4□□□□□ -0.9
SP140-207ENST00000456542 NCBP1Q09161 790 aaKnown RBP9.4□□□□□ -0.9
SP140-207ENST00000456542 MAPK7Q13164 816 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 GRIN2CQ14957 1233 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 AMHR2Q16671 573 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 FAM187BQ17R55 369 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 SPECC1Q5M775 1068 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 TWF2Q6IBS0 349 aaKnown RBP9.4□□□□□ -0.9
SP140-207ENST00000456542 USP49Q70CQ1 688 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 ZNF598Q86UK7 904 aaKnown RBP9.4□□□□□ -0.9
SP140-207ENST00000456542 ECHDC2Q86YB7 292 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 ZBTB8OSQ8IWT0 167 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 CMTR2Q8IYT2 770 aaKnown RBP9.4□□□□□ -0.9
SP140-207ENST00000456542 DAW1Q8N136 415 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 PIP4P2Q8N4L2 257 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 LRRC15Q8TF66 581 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 RSPH1Q8WYR4 309 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 BSNDQ8WZ55 320 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 RAD54LQ92698 747 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 CCDC51Q96ER9 411 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 FAM161BQ96MY7 647 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 PLIN2Q99541 437 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 CDX2Q99626 313 aaPredicted RBP9.4□□□□□ -0.9
SP140-207ENST00000456542 PRMT7Q9NVM4 692 aaPredicted RBP9.4□□□□□ -0.9
SP140-207ENST00000456542 KCNG1Q9UIX4 513 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 ODF2LQ9ULJ1 636 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 RWDD3Q9Y3V2 267 aa9.4□□□□□ -0.9
SP140-207ENST00000456542 SZT2Q5T011 3432 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 ATF7P17544 494 aaPredicted RBP9.39□□□□□ -0.91
SP140-207ENST00000456542 DDIT3P35638 169 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 EFNA5P52803 228 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 KRT85P78386 507 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 NUCB2P80303 420 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 DMP1Q13316 513 aaPredicted RBP9.39□□□□□ -0.91
SP140-207ENST00000456542 BTG3Q14201 252 aaPredicted RBP9.39□□□□□ -0.91
SP140-207ENST00000456542 MAPK6Q16659 721 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 AXDND1Q5T1B0 1012 aaPredicted RBP9.39□□□□□ -0.91
SP140-207ENST00000456542 RRAGBQ5VZM2 374 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 NOTUMQ6P988 496 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 CCDC73Q6ZRK6 1079 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 GPBP1Q86WP2 473 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 FIBCD1Q8N539 461 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 CNNM3Q8NE01 707 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 DEPTORQ8TB45 409 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 SPIRE2Q8WWL2 714 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 KCNN1Q92952 543 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 CLP1Q92989 425 aaKnown RBP9.39□□□□□ -0.91
SP140-207ENST00000456542 NTPCRQ9BSD7 190 aaKnown RBP9.39□□□□□ -0.91
SP140-207ENST00000456542 TMEM117Q9H0C3 514 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 CCDC113Q9H0I3 377 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 FZD8Q9H461 694 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 FAM105AQ9NUU6 356 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 RCOR1Q9UKL0 485 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 STXBP5LQ9Y2K9 1186 aa9.39□□□□□ -0.91
SP140-207ENST00000456542 RBM19Q9Y4C8 960 aaKnown RBP9.39□□□□□ -0.91
SP140-207ENST00000456542 CNTNAP2Q9UHC6 1331 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 A0A1B0GUA9 196 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 ACKR2O00590 384 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 PRKCBP05771 671 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 LINC00271P0C7V0 271 aa9.38□□□□□ -0.91
SP140-207ENST00000456542 PLS3P13797 630 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms