RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 CYP11B2P19099 503 aa19.25■□□□□ 0.67
USP39-208ENST00000455732 IBSPP21815 317 aaPredicted RBP19.25■□□□□ 0.67
USP39-208ENST00000455732 GLRA2P23416 452 aa19.25■□□□□ 0.67
USP39-208ENST00000455732 PTENP60484 403 aa19.25■□□□□ 0.67
USP39-208ENST00000455732 SF3A1Q15459 793 aaKnown RBP19.25■□□□□ 0.67
USP39-208ENST00000455732 PADI6Q6TGC4 694 aa19.25■□□□□ 0.67
USP39-208ENST00000455732 ASAP3Q8TDY4 903 aa19.25■□□□□ 0.67
USP39-208ENST00000455732 ADAMTS19Q8TE59 1207 aa19.25■□□□□ 0.67
USP39-208ENST00000455732 P2RX5Q93086 422 aa19.25■□□□□ 0.67
USP39-208ENST00000455732 POLR3FQ9H1D9 316 aaPredicted RBP19.25■□□□□ 0.67
USP39-208ENST00000455732 AGPAT5Q9NUQ2 364 aa19.25■□□□□ 0.67
USP39-208ENST00000455732 DDX19AQ9NUU7 478 aaKnown RBP19.25■□□□□ 0.67
USP39-208ENST00000455732 COG5Q9UP83 839 aa19.25■□□□□ 0.67
USP39-208ENST00000455732 MORC2Q9Y6X9 1032 aaPredicted RBP19.25■□□□□ 0.67
USP39-208ENST00000455732 A0A0U1RQF3 1178 aa19.24■□□□□ 0.67
USP39-208ENST00000455732 GRM6O15303 877 aa19.24■□□□□ 0.67
USP39-208ENST00000455732 CDC25AP30304 524 aa19.24■□□□□ 0.67
USP39-208ENST00000455732 CAPSQ13938 189 aa19.24■□□□□ 0.67
USP39-208ENST00000455732 CATSPER4Q7RTX7 472 aa19.24■□□□□ 0.67
USP39-208ENST00000455732 LMAN2LQ9H0V9 348 aa19.24■□□□□ 0.67
USP39-208ENST00000455732 BHMT2Q9H2M3 363 aa19.24■□□□□ 0.67
USP39-208ENST00000455732 MINDY3Q9H8M7 445 aa19.24■□□□□ 0.67
USP39-208ENST00000455732 RNF19AQ9NV58 838 aa19.24■□□□□ 0.67
USP39-208ENST00000455732 DNM3Q9UQ16 869 aa19.24■□□□□ 0.67
USP39-208ENST00000455732 BDP1A6H8Y1 2624 aa19.23■□□□□ 0.67
USP39-208ENST00000455732 HOXA2O43364 376 aa19.23■□□□□ 0.67
USP39-208ENST00000455732 EYA4O95677 639 aa19.23■□□□□ 0.67
USP39-208ENST00000455732 HSP90AA1P07900 732 aaKnown RBP19.23■□□□□ 0.67
USP39-208ENST00000455732 FGFR1P11362 822 aa19.23■□□□□ 0.67
USP39-208ENST00000455732 PTPAQ15257 358 aa19.23■□□□□ 0.67
USP39-208ENST00000455732 TIGD5Q53EQ6 642 aa19.23■□□□□ 0.67
USP39-208ENST00000455732 NAALADL2Q58DX5 795 aa19.23■□□□□ 0.67
USP39-208ENST00000455732 ECHDC2Q86YB7 292 aa19.23■□□□□ 0.67
USP39-208ENST00000455732 HLA-CQ95604 372 aa19.23■□□□□ 0.67
USP39-208ENST00000455732 UHRF1Q96T88 793 aaPredicted RBP19.23■□□□□ 0.67
USP39-208ENST00000455732 NT5C3AQ9H0P0 336 aa19.23■□□□□ 0.67
USP39-208ENST00000455732 GPRC5CQ9NQ84 441 aa19.23■□□□□ 0.67
USP39-208ENST00000455732 PLAGL2Q9UPG8 496 aa19.23■□□□□ 0.67
USP39-208ENST00000455732 PIN4Q9Y237 131 aaKnown RBP19.23■□□□□ 0.67
USP39-208ENST00000455732 TBKBP1A7MCY6 615 aa19.22■□□□□ 0.67
USP39-208ENST00000455732 EOMESO95936 686 aa19.22■□□□□ 0.67
USP39-208ENST00000455732 ATF7P17544 494 aaPredicted RBP19.22■□□□□ 0.67
USP39-208ENST00000455732 LONP1P36776 959 aaKnown RBP19.22■□□□□ 0.67
USP39-208ENST00000455732 CAMK1Q14012 370 aa19.22■□□□□ 0.67
USP39-208ENST00000455732 AAK1Q2M2I8 961 aa19.22■□□□□ 0.67
USP39-208ENST00000455732 CDCA2Q69YH5 1023 aaPredicted RBP19.22■□□□□ 0.67
USP39-208ENST00000455732 ZNF598Q86UK7 904 aaKnown RBP19.22■□□□□ 0.67
USP39-208ENST00000455732 ALG13Q9NP73 1137 aaKnown RBP19.22■□□□□ 0.67
USP39-208ENST00000455732 CLIC4Q9Y696 253 aa19.22■□□□□ 0.67
USP39-208ENST00000455732 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.21■□□□□ 0.67
USP39-208ENST00000455732 E9PMD0 336 aa19.21■□□□□ 0.67
USP39-208ENST00000455732 ITGB1P05556 798 aa19.21■□□□□ 0.67
USP39-208ENST00000455732 SKIP12755 728 aa19.21■□□□□ 0.67
USP39-208ENST00000455732 BMP1P13497 986 aa19.21■□□□□ 0.67
USP39-208ENST00000455732 HOXA11P31270 313 aaPredicted RBP19.21■□□□□ 0.67
USP39-208ENST00000455732 RAB27AP51159 221 aa19.21■□□□□ 0.67
USP39-208ENST00000455732 MBTD1Q05BQ5 628 aa19.21■□□□□ 0.67
USP39-208ENST00000455732 TMEM119Q4V9L6 283 aa19.21■□□□□ 0.67
USP39-208ENST00000455732 KCNK18Q7Z418 384 aa19.21■□□□□ 0.67
USP39-208ENST00000455732 KLHL23Q8NBE8 558 aa19.21■□□□□ 0.67
USP39-208ENST00000455732 RSPH1Q8WYR4 309 aa19.21■□□□□ 0.67
USP39-208ENST00000455732 CASD1Q96PB1 797 aa19.21■□□□□ 0.67
USP39-208ENST00000455732 PNMA5Q96PV4 448 aa19.21■□□□□ 0.67
USP39-208ENST00000455732 TMEM117Q9H0C3 514 aa19.21■□□□□ 0.67
USP39-208ENST00000455732 HCSTQ9UBK5 93 aa19.21■□□□□ 0.67
USP39-208ENST00000455732 ZNF623O75123 536 aa19.2■□□□□ 0.66
USP39-208ENST00000455732 ERLIN2O94905 339 aa19.2■□□□□ 0.66
USP39-208ENST00000455732 AXLP30530 894 aa19.2■□□□□ 0.66
USP39-208ENST00000455732 KCNQ1P51787 676 aa19.2■□□□□ 0.66
USP39-208ENST00000455732 COL19A1Q14993 1142 aa19.2■□□□□ 0.66
USP39-208ENST00000455732 TCEAL5Q5H9L2 206 aa19.2■□□□□ 0.66
USP39-208ENST00000455732 TWF2Q6IBS0 349 aaKnown RBP19.2■□□□□ 0.66
USP39-208ENST00000455732 FAM173BQ6P4H8 233 aa19.2■□□□□ 0.66
USP39-208ENST00000455732 MAEAQ7L5Y9 396 aa19.2■□□□□ 0.66
USP39-208ENST00000455732 CABP7Q86V35 215 aa19.2■□□□□ 0.66
USP39-208ENST00000455732 SPPL3Q8TCT6 385 aa19.2■□□□□ 0.66
USP39-208ENST00000455732 KIFAP3Q92845 792 aa19.2■□□□□ 0.66
USP39-208ENST00000455732 CCDC51Q96ER9 411 aa19.2■□□□□ 0.66
USP39-208ENST00000455732 NSUN3Q9H649 340 aaKnown RBP19.2■□□□□ 0.66
USP39-208ENST00000455732 CWH43Q9H720 699 aa19.2■□□□□ 0.66
USP39-208ENST00000455732 TYW1Q9NV66 732 aaKnown RBP19.2■□□□□ 0.66
USP39-208ENST00000455732 INO80B-WBP1J3KQ70 363 aa19.19■□□□□ 0.66
USP39-208ENST00000455732 TSPAN1O60635 241 aa19.19■□□□□ 0.66
USP39-208ENST00000455732 DNAJB1P25685 340 aa19.19■□□□□ 0.66
USP39-208ENST00000455732 NAMPTP43490 491 aa19.19■□□□□ 0.66
USP39-208ENST00000455732 GRIN1Q05586 938 aa19.19■□□□□ 0.66
USP39-208ENST00000455732 PPP2R5AQ15172 486 aa19.19■□□□□ 0.66
USP39-208ENST00000455732 AMHR2Q16671 573 aa19.19■□□□□ 0.66
USP39-208ENST00000455732 CLLU1OSQ5K130 101 aa19.19■□□□□ 0.66
USP39-208ENST00000455732 LRRC55Q6ZSA7 311 aa19.19■□□□□ 0.66
USP39-208ENST00000455732 BSNDQ8WZ55 320 aa19.19■□□□□ 0.66
USP39-208ENST00000455732 CDK5RAP3Q96JB5 506 aa19.19■□□□□ 0.66
USP39-208ENST00000455732 USP28Q96RU2 1077 aa19.19■□□□□ 0.66
USP39-208ENST00000455732 TIPINQ9BVW5 301 aa19.19■□□□□ 0.66
USP39-208ENST00000455732 C2orf40Q9H1Z8 148 aa19.19■□□□□ 0.66
USP39-208ENST00000455732 UBE2ZQ9H832 354 aaPredicted RBP19.19■□□□□ 0.66
USP39-208ENST00000455732 FAM105AQ9NUU6 356 aa19.19■□□□□ 0.66
USP39-208ENST00000455732 FBXO2Q9UK22 296 aaPredicted RBP19.19■□□□□ 0.66
USP39-208ENST00000455732 SRPRBQ9Y5M8 271 aaKnown RBP19.19■□□□□ 0.66
USP39-208ENST00000455732 LRRIQ4A6NIV6 560 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms