RNA–Protein interactions for RNA: ENST00000455362.1

HMGB1P4-201, Transcript of high mobility group box 1 pseudogene 4, humanhuman

BASIC

Gene HMGB1P4, Length 567 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P4-201ENST00000455362 CACNB3P54284 484 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 GEMIN4P57678 1058 aaKnown RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 PTSQ03393 145 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 GABPAQ06546 454 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 UBAP2LQ14157 1087 aaKnown RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 IKBKEQ14164 716 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 INPP5AQ14642 412 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 SKOR2Q2VWA4 1001 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 ATP13A4Q4VNC1 1196 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 TMEM201Q5SNT2 666 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 TMEM240Q5SV17 173 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 FKBP1CQ5VVH2 108 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 ELMSAN1Q6PJG2 1045 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 LRFN4Q6PJG9 635 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 MMS22LQ6ZRQ5 1243 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 SRLQ86TD4 932 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 FAM35AQ86V20 835 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 C11orf74Q86VG3 221 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 PHACTR4Q8IZ21 702 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 CACTIN-AS1Q8N1I8 211 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 CBARPQ8N350 705 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 C1orf131Q8NDD1 294 aaKnown RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 PTPRN2Q92932 1015 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 HSPBAP1Q96EW2 488 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 AHCYL2Q96HN2 611 aaKnown RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 SCLYQ96I15 445 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 TMEM87BQ96K49 555 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 FGD4Q96M96 766 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 SLC6A18Q96N87 628 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 AIFM3Q96NN9 605 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 LGR4Q9BXB1 951 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 OSBPL5Q9H0X9 879 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 LY9Q9HBG7 655 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 MKNK2Q9HBH9 465 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 MYOZ2Q9NPC6 264 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 ANLNQ9NQW6 1124 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 TOMM22Q9NS69 142 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 KLHL11Q9NVR0 708 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 APEX2Q9UBZ4 518 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZNF70Q9UC06 446 aaPredicted RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 SUSD2Q9UGT4 822 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 CNOT7Q9UIV1 285 aaKnown RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 ANGEL1Q9UNK9 670 aaKnown RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 MRFAP1Q9Y605 127 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZNF541Q9H0D2 1346 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 MYH8P13535 1937 aa5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 DDX60LQ5H9U9 1706 aaKnown RBP5.91□□□□□ -1.46
HMGB1P4-201ENST00000455362 KLF18A0A0U1RQI7 1052 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 DYTNA2CJ06 578 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 BLACEA4D250 179 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 DDTLA6NHG4 134 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZBTB42B2RXF5 422 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 PRRT4C9JH25 899 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 WNT10BO00744 389 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 GAS7O60861 476 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 ULK1O75385 1050 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 FKBP9O95302 570 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 CFBP00751 764 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 THBS1P07996 1170 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 SETSIPP0DME0 302 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 ESRRAP11474 423 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 ARL4DP49703 201 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 TFAP4Q01664 338 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 POU5F1Q01860 360 aaKnown RBP5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 ST3GAL1Q11201 340 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 TCP10Q12799 353 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 KLF1Q13351 362 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 SIM2Q14190 667 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 KRT72Q14CN4 511 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 PCBP2Q15366 365 aaKnown RBP eCLIP5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 SEC23AQ15436 765 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 GPR162Q16538 588 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 DBN1Q16643 649 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 NBPF9Q3BBW0 867 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 FAM47AQ5JRC9 791 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZCCHC8Q6NZY4 707 aaKnown RBP5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 PGM2L1Q6PCE3 622 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 FKBP9P1Q75LS8 142 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 VN1R5Q7Z5H4 357 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 DDX53Q86TM3 631 aaKnown RBP5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 SGMS1Q86VZ5 419 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 KIF18BQ86Y91 864 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 FOXP4Q8IVH2 680 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 CCDC83Q8IWF9 413 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZNF444Q8N0Y2 327 aaPredicted RBP5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 GPC2Q8N158 579 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 NXPE1Q8N323 547 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 CCDC89Q8N998 374 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 SLC44A5Q8NCS7 719 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 BVESQ8NE79 360 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 PPHLN1Q8NEY8 458 aaKnown RBP5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 FAM151AQ8WW52 585 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 ANKS1AQ92625 1134 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 GTF3C6Q969F1 213 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 TRMT2BQ96GJ1 504 aaKnown RBP5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 DHX36Q9H2U1 1008 aaKnown RBP5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 ZNF287Q9HBT7 754 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 C1orf112Q9NSG2 853 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 CHMP5Q9NZZ3 219 aa5.9□□□□□ -1.46
HMGB1P4-201ENST00000455362 RNF181Q9P0P0 153 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms