RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 RASGRF1Q13972 1273 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 ATP2B3Q16720 1220 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 CDCP2Q5VXM1 449 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 OLFML2BQ68BL8 750 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 SPTY2D1Q68D10 685 aaPredicted RBP4.54□□□□□ -1.68
RBM39-220ENST00000455343 TMC3Q7Z5M5 1100 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 NLRX1Q86UT6 975 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 DZIP1Q86YF9 867 aaKnown RBP4.54□□□□□ -1.68
RBM39-220ENST00000455343 FOXP4Q8IVH2 680 aaPredicted RBP4.54□□□□□ -1.68
RBM39-220ENST00000455343 NSUN4Q96CB9 384 aaKnown RBP4.54□□□□□ -1.68
RBM39-220ENST00000455343 TIFAQ96CG3 184 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 TCTN2Q96GX1 697 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 MAP6Q96JE9 813 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 RNPC3Q96LT9 517 aaKnown RBP4.54□□□□□ -1.68
RBM39-220ENST00000455343 LRFN3Q9BTN0 628 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 FOXP3Q9BZS1 431 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP4.54□□□□□ -1.68
RBM39-220ENST00000455343 DHX36Q9H2U1 1008 aaKnown RBP4.54□□□□□ -1.68
RBM39-220ENST00000455343 TMOD4Q9NZQ9 345 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 PI4KBQ9UBF8 816 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 MGAMO43451 1857 aa4.54□□□□□ -1.68
RBM39-220ENST00000455343 DOCK3Q8IZD9 2030 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 TEX51A0A1B0GUA7 166 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 TMEM82A0PJX8 343 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 KBTBD13C9JR72 458 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 STRNO43815 780 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 NRDCO43847 1150 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 LDHCP07864 332 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 CLTBP09497 229 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 CNGA1P29973 690 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 ADORA1P30542 326 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 POLR2BP30876 1174 aaKnown RBP4.53□□□□□ -1.68
RBM39-220ENST00000455343 IL15P40933 162 aaPredicted RBP4.53□□□□□ -1.68
RBM39-220ENST00000455343 ADCYAP1R1P41586 468 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 TIMM10P62072 90 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 SNW1Q13573 536 aaKnown RBP4.53□□□□□ -1.68
RBM39-220ENST00000455343 LRRC41Q15345 812 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 SHROOM1Q2M3G4 852 aaPredicted RBP4.53□□□□□ -1.68
RBM39-220ENST00000455343 BBS9Q3SYG4 887 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 LILRA6Q6PI73 481 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 CATSPERGQ6ZRH7 1159 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 C16orf59Q7L2K0 433 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 ANKRD33Q7Z3H0 272 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 CCAR1Q8IX12 1150 aaKnown RBP4.53□□□□□ -1.68
RBM39-220ENST00000455343 ZNF655Q8N720 491 aaPredicted RBP4.53□□□□□ -1.68
RBM39-220ENST00000455343 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.53□□□□□ -1.685e-53■■■□□ 16.1
RBM39-220ENST00000455343 PAGR1Q9BTK6 254 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 CNNM2Q9H8M5 875 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 EHMT1Q9H9B1 1298 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 GCM1Q9NP62 436 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 BTBD7Q9P203 1132 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 ABCF2Q9UG63 623 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 TCFL5Q9UL49 500 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 REV3LO60673 3130 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 PLXNB2O15031 1838 aa4.53□□□□□ -1.68
RBM39-220ENST00000455343 NCOR1O75376 2440 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 OR14I1A6ND48 311 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 PRAMEF1O95521 474 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 TIMP1P01033 207 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 INHBBP09529 407 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 POU3F3P20264 500 aaPredicted RBP4.52□□□□□ -1.69
RBM39-220ENST00000455343 ADORA2AP29274 412 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 KIR2DL1P43626 348 aaPredicted RBP4.52□□□□□ -1.69
RBM39-220ENST00000455343 KIR2DL2P43627 348 aaPredicted RBP4.52□□□□□ -1.69
RBM39-220ENST00000455343 PCBP3P57721 371 aaKnown RBP4.52□□□□□ -1.69
RBM39-220ENST00000455343 FPGSQ05932 587 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 RAD51AP2Q09MP3 1159 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 CCDC184Q52MB2 194 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 FAM47AQ5JRC9 791 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 TMEM240Q5SV17 173 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 ANO1Q5XXA6 986 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 TATDN1Q6P1N9 297 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 ABRAQ8N0Z2 381 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 FERMT2Q96AC1 680 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 ATG4CQ96DT6 458 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 KIAA1683Q9H0B3 1180 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 IRF2BPLQ9H1B7 796 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 PRDM12Q9H4Q4 367 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 EPHX3Q9H6B9 360 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 HMG20BQ9P0W2 317 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 ADAMTS1Q9UHI8 967 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 NRBP1Q9UHY1 535 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 ZMYM5Q9UJ78 669 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 TBX21Q9UL17 535 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 ZBTB21Q9ULJ3 1066 aa4.52□□□□□ -1.69
RBM39-220ENST00000455343 PHIPQ8WWQ0 1821 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 PTPRCP08575 1304 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 LOC285556D6RIA3 1793 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 MAST2Q6P0Q8 1798 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 PTPRFP10586 1907 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 A0A1B0GUL7 405 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 A0A1W2PQ45 241 aaPredicted RBP4.51□□□□□ -1.69
RBM39-220ENST00000455343 A0A1W2PQY0 241 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 MEIS3P2A8K0S8 358 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 GRXCR1A8MXD5 290 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 HRKO00198 91 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 ERC2O15083 957 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 SIGLEC6O43699 453 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 IGSF3O75054 1194 aa4.51□□□□□ -1.69
RBM39-220ENST00000455343 SYPP08247 313 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms