RNA–Protein interactions for RNA: ENST00000454850.1

CLCN4-204, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 3

Gene CLCN4, Length 487 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-204ENST00000454850 TBC1D13Q9NVG8 400 aa11.18□□□□□ -0.62
CLCN4-204ENST00000454850 RBM28Q9NW13 759 aaKnown RBP11.18□□□□□ -0.62
CLCN4-204ENST00000454850 BARHL2Q9NY43 387 aa11.18□□□□□ -0.62
CLCN4-204ENST00000454850 PIN4Q9Y237 131 aaKnown RBP11.18□□□□□ -0.62
CLCN4-204ENST00000454850 PATJQ8NI35 1801 aa11.18□□□□□ -0.62
CLCN4-204ENST00000454850 WDR64B1ANS9 1081 aa11.17□□□□□ -0.62
CLCN4-204ENST00000454850 ADAMTS3O15072 1205 aa11.17□□□□□ -0.62
CLCN4-204ENST00000454850 B4GALT3O60512 393 aa11.17□□□□□ -0.62
CLCN4-204ENST00000454850 DCNP07585 359 aaKnown RBP11.17□□□□□ -0.62
CLCN4-204ENST00000454850 CNPP09543 421 aaKnown RBP11.17□□□□□ -0.62
CLCN4-204ENST00000454850 DRP2Q13474 957 aa11.17□□□□□ -0.62
CLCN4-204ENST00000454850 SGMS1Q86VZ5 419 aa11.17□□□□□ -0.62
CLCN4-204ENST00000454850 ZNF280BQ86YH2 543 aa11.17□□□□□ -0.62
CLCN4-204ENST00000454850 TCEANC2Q96MN5 208 aa11.17□□□□□ -0.62
CLCN4-204ENST00000454850 KLHL5Q96PQ7 755 aa11.17□□□□□ -0.62
CLCN4-204ENST00000454850 GCOM2Q9BZD3 368 aaPredicted RBP11.17□□□□□ -0.62
CLCN4-204ENST00000454850 GLT8D2Q9H1C3 349 aa11.17□□□□□ -0.62
CLCN4-204ENST00000454850 SEMA4AQ9H3S1 761 aa11.17□□□□□ -0.62
CLCN4-204ENST00000454850 MAN1C1Q9NR34 630 aa11.17□□□□□ -0.62
CLCN4-204ENST00000454850 NRBP2Q9NSY0 501 aa11.17□□□□□ -0.62
CLCN4-204ENST00000454850 IGSF9Q9P2J2 1179 aa11.17□□□□□ -0.62
CLCN4-204ENST00000454850 NAP1L2Q9ULW6 460 aaPredicted RBP11.17□□□□□ -0.62
CLCN4-204ENST00000454850 A0A087WZ62 844 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 GOLGA8AA7E2F4 631 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 GOLGA8BA8MQT2 603 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 hCG_1984214I3L0E3 225 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 ZBTB43O43298 467 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 CYP3A4P08684 503 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 SFPQP23246 707 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLCN4-204ENST00000454850 FUT2Q10981 343 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 PUM1Q14671 1186 aaKnown RBP eCLIP11.16□□□□□ -0.62
CLCN4-204ENST00000454850 MTERF2Q49AM1 385 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 CREB3L3Q68CJ9 461 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 TEX2Q8IWB9 1127 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 ZNF710Q8N1W2 664 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 DCLK2Q8N568 766 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 ZNF713Q8N859 430 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-204ENST00000454850 ST13P5Q8NFI4 369 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-204ENST00000454850 SH2D3AQ9BRG2 576 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 FDXACB1Q9BRP7 624 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-204ENST00000454850 LSG1Q9H089 658 aaKnown RBP11.16□□□□□ -0.62
CLCN4-204ENST00000454850 CHST12Q9NRB3 414 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 DISC1Q9NRI5 854 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 WNT16Q9UBV4 365 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 SEPT9Q9UHD8 586 aaPredicted RBP11.16□□□□□ -0.62
CLCN4-204ENST00000454850 BRPF3Q9ULD4 1205 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 COL4A3Q01955 1670 aa11.16□□□□□ -0.62
CLCN4-204ENST00000454850 CLUHO75153 1309 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 ARID2Q68CP9 1835 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 CCDC195A0A1B0GUA6 201 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 CARNS1A5YM72 827 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 TMEM150BA6NC51 233 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 OFD1O75665 1012 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 SKIP12755 728 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 AK2P54819 239 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 NONOQ15233 471 aaKnown RBP eCLIP11.15□□□□□ -0.62
CLCN4-204ENST00000454850 ZC3H14Q6PJT7 736 aaKnown RBP11.15□□□□□ -0.62
CLCN4-204ENST00000454850 C15orf39Q6ZRI6 1047 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 CATSPER4Q7RTX7 472 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 REXO1Q8N1G1 1221 aaKnown RBP11.15□□□□□ -0.62
CLCN4-204ENST00000454850 URGCPQ8TCY9 931 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 GPR152Q8TDT2 470 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 CRYGNQ8WXF5 182 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 STAMQ92783 540 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 GJA10Q969M2 543 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 MYADMQ96S97 322 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 MRPL17Q9NRX2 175 aaKnown RBP11.15□□□□□ -0.62
CLCN4-204ENST00000454850 FAM105AQ9NUU6 356 aa11.15□□□□□ -0.62
CLCN4-204ENST00000454850 KLF18A0A0U1RQI7 1052 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 INPPL1O15357 1258 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 RFPL2O75678 378 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 KRT37O76014 449 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 DDHD2O94830 711 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 URODP06132 367 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 SPATA31D3P0C874 917 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 SP9P0CG40 484 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 SRFP11831 508 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 RAB27AP51159 221 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 AFF1P51825 1210 aaKnown RBP11.14□□□□□ -0.63
CLCN4-204ENST00000454850 SPATA31D4Q6ZUB0 917 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 RHPN2Q8IUC4 686 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 KSR1Q8IVT5 923 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 SLC44A3Q8N4M1 653 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 SMG7Q92540 1137 aaKnown RBP11.14□□□□□ -0.63
CLCN4-204ENST00000454850 RUBCNQ92622 972 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 LENG9Q96B70 501 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 NLRP4Q96MN2 994 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 CNTNAP3BQ96NU0 1288 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 FAM193BQ96PV7 902 aaPredicted RBP11.14□□□□□ -0.63
CLCN4-204ENST00000454850 CNTNAP3Q9BZ76 1288 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 UNC45AQ9H3U1 944 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 FAN1Q9Y2M0 1017 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 PRG3Q9Y2Y8 225 aaPredicted RBP11.14□□□□□ -0.63
CLCN4-204ENST00000454850 RALGAPA1Q6GYQ0 2036 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 CHD6Q8TD26 2715 aa11.14□□□□□ -0.63
CLCN4-204ENST00000454850 CFAP47Q6ZTR5 3102 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 POTEMA6NI47 508 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 MSH4O15457 936 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 GAS7O60861 476 aa11.13□□□□□ -0.63
CLCN4-204ENST00000454850 LRRN2O75325 713 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms