RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 MCPH1Q8NEM0 835 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 C17orf80Q9BSJ5 609 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 MTUS1Q9ULD2 1270 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 PCDHB7Q9Y5E2 793 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 TRIP11Q15643 1979 aa16.25■□□□□ 0.19
VPS16-205ENST00000453689 EYA4O95677 639 aa16.24■□□□□ 0.19
VPS16-205ENST00000453689 CYP11B2P19099 503 aa16.24■□□□□ 0.19
VPS16-205ENST00000453689 TXLNAP40222 546 aa16.24■□□□□ 0.19
VPS16-205ENST00000453689 UBA7P41226 1012 aa16.24■□□□□ 0.19
VPS16-205ENST00000453689 PHKA2P46019 1235 aa16.24■□□□□ 0.19
VPS16-205ENST00000453689 GATMP50440 423 aa16.24■□□□□ 0.19
VPS16-205ENST00000453689 TFDP1Q14186 410 aa16.24■□□□□ 0.19
VPS16-205ENST00000453689 ZRSR1Q15695 479 aaKnown RBP16.24■□□□□ 0.19
VPS16-205ENST00000453689 SPECC1Q5M775 1068 aa16.24■□□□□ 0.19
VPS16-205ENST00000453689 IFNLR1Q8IU57 520 aaPredicted RBP16.24■□□□□ 0.19
VPS16-205ENST00000453689 SYMPKQ92797 1274 aaKnown RBP16.24■□□□□ 0.19
VPS16-205ENST00000453689 PNMA5Q96PV4 448 aa16.24■□□□□ 0.19
VPS16-205ENST00000453689 CCSER1Q9C0I3 900 aa16.24■□□□□ 0.19
VPS16-205ENST00000453689 RNF216Q9NWF9 866 aaPredicted RBP16.24■□□□□ 0.19
VPS16-205ENST00000453689 DNM3Q9UQ16 869 aa16.24■□□□□ 0.19
VPS16-205ENST00000453689 TRANK1O15050 2925 aa16.24■□□□□ 0.19
VPS16-205ENST00000453689 PRRC2BQ5JSZ5 2229 aaKnown RBP16.23■□□□□ 0.19
VPS16-205ENST00000453689 EYSQ5T1H1 3165 aa16.23■□□□□ 0.19
VPS16-205ENST00000453689 PTENP60484 403 aa16.23■□□□□ 0.19
VPS16-205ENST00000453689 POU5F1BQ06416 359 aa16.23■□□□□ 0.19
VPS16-205ENST00000453689 GRB10Q13322 594 aa16.23■□□□□ 0.19
VPS16-205ENST00000453689 BTG3Q14201 252 aaPredicted RBP16.23■□□□□ 0.19
VPS16-205ENST00000453689 PAN2Q504Q3 1202 aaKnown RBP16.23■□□□□ 0.19
VPS16-205ENST00000453689 FAM102BQ5T8I3 360 aa16.23■□□□□ 0.19
VPS16-205ENST00000453689 ADALQ6DHV7 355 aa16.23■□□□□ 0.19
VPS16-205ENST00000453689 ECHDC2Q86YB7 292 aa16.23■□□□□ 0.19
VPS16-205ENST00000453689 CMTR2Q8IYT2 770 aaKnown RBP16.23■□□□□ 0.19
VPS16-205ENST00000453689 FIBCD1Q8N539 461 aa16.23■□□□□ 0.19
VPS16-205ENST00000453689 TMEM87AQ8NBN3 555 aa16.23■□□□□ 0.19
VPS16-205ENST00000453689 GBP4Q96PP9 640 aa16.23■□□□□ 0.19
VPS16-205ENST00000453689 NT5C3AQ9H0P0 336 aa16.23■□□□□ 0.19
VPS16-205ENST00000453689 ELAC1Q9H777 363 aaKnown RBP16.23■□□□□ 0.19
VPS16-205ENST00000453689 CHST12Q9NRB3 414 aa16.23■□□□□ 0.19
VPS16-205ENST00000453689 AGPAT5Q9NUQ2 364 aa16.23■□□□□ 0.19
VPS16-205ENST00000453689 TMEM161AQ9NX61 479 aa16.23■□□□□ 0.19
VPS16-205ENST00000453689 DACT1Q9NYF0 836 aa16.23■□□□□ 0.19
VPS16-205ENST00000453689 PIN4Q9Y237 131 aaKnown RBP16.23■□□□□ 0.19
VPS16-205ENST00000453689 LINC00271P0C7V0 271 aa16.22■□□□□ 0.19
VPS16-205ENST00000453689 IGFBP4P22692 258 aa16.22■□□□□ 0.19
VPS16-205ENST00000453689 TMEM119Q4V9L6 283 aa16.22■□□□□ 0.19
VPS16-205ENST00000453689 SHC4Q6S5L8 630 aa16.22■□□□□ 0.19
VPS16-205ENST00000453689 USP49Q70CQ1 688 aa16.22■□□□□ 0.19
VPS16-205ENST00000453689 KCTD17Q8N5Z5 321 aa16.22■□□□□ 0.19
VPS16-205ENST00000453689 FBXO22Q8NEZ5 403 aa16.22■□□□□ 0.19
VPS16-205ENST00000453689 GDPD5Q8WTR4 605 aa16.22■□□□□ 0.19
VPS16-205ENST00000453689 BSNDQ8WZ55 320 aa16.22■□□□□ 0.19
VPS16-205ENST00000453689 CALML4Q96GE6 196 aa16.22■□□□□ 0.19
VPS16-205ENST00000453689 EPSTI1Q96J88 318 aa16.22■□□□□ 0.19
VPS16-205ENST00000453689 CDK5RAP3Q96JB5 506 aa16.22■□□□□ 0.19
VPS16-205ENST00000453689 SAMD11Q96NU1 681 aa16.22■□□□□ 0.19
VPS16-205ENST00000453689 PLIN2Q99541 437 aa16.22■□□□□ 0.19
VPS16-205ENST00000453689 NFKBIZQ9BYH8 718 aa16.22■□□□□ 0.19
VPS16-205ENST00000453689 A0A0U1RQF3 1178 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 A0A1W2PQ27 194 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 A0A1W2PQ64 194 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 A0A1W2PQD8 194 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 LRRIQ4A6NIV6 560 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 LPXNO60711 386 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 ERLIN2O94905 339 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 FGFR1P11362 822 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 ATF7P17544 494 aaPredicted RBP16.21■□□□□ 0.19
VPS16-205ENST00000453689 MBTD1Q05BQ5 628 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 KARSQ15046 597 aaKnown RBP16.21■□□□□ 0.19
VPS16-205ENST00000453689 EPC2Q52LR7 807 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 RESP18Q5W5W9 173 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 TWF2Q6IBS0 349 aaKnown RBP16.21■□□□□ 0.19
VPS16-205ENST00000453689 ZNF598Q86UK7 904 aaKnown RBP16.21■□□□□ 0.19
VPS16-205ENST00000453689 TMEM192Q8IY95 271 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 RASSF8Q8NHQ8 419 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 MAFAQ8NHW3 353 aaPredicted RBP16.21■□□□□ 0.19
VPS16-205ENST00000453689 CLP1Q92989 425 aaKnown RBP16.21■□□□□ 0.19
VPS16-205ENST00000453689 TRAIPQ9BWF2 469 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 POLD4Q9HCU8 107 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 RNF19AQ9NV58 838 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 FAM13BQ9NYF5 915 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 CCDC39Q9UFE4 941 aa16.21■□□□□ 0.19
VPS16-205ENST00000453689 MRPL42Q9Y6G3 142 aaKnown RBP16.21■□□□□ 0.19
VPS16-205ENST00000453689 REV3LO60673 3130 aa16.2■□□□□ 0.18
VPS16-205ENST00000453689 CITO14578 2027 aa16.2■□□□□ 0.18
VPS16-205ENST00000453689 GOLGA6L4A6NEF3 574 aa16.2■□□□□ 0.18
VPS16-205ENST00000453689 TBKBP1A7MCY6 615 aa16.2■□□□□ 0.18
VPS16-205ENST00000453689 INO80B-WBP1J3KQ70 363 aa16.2■□□□□ 0.18
VPS16-205ENST00000453689 TSPAN1O60635 241 aa16.2■□□□□ 0.18
VPS16-205ENST00000453689 CMA1P23946 247 aa16.2■□□□□ 0.18
VPS16-205ENST00000453689 HOXA11P31270 313 aaPredicted RBP16.2■□□□□ 0.18
VPS16-205ENST00000453689 CDCA2Q69YH5 1023 aaPredicted RBP16.2■□□□□ 0.18
VPS16-205ENST00000453689 RINT1Q6NUQ1 792 aa16.2■□□□□ 0.18
VPS16-205ENST00000453689 C1orf186Q6ZWK4 172 aa16.2■□□□□ 0.18
VPS16-205ENST00000453689 RNF169Q8NCN4 708 aa16.2■□□□□ 0.18
VPS16-205ENST00000453689 KIFAP3Q92845 792 aa16.2■□□□□ 0.18
VPS16-205ENST00000453689 RUSC1Q9BVN2 902 aa16.2■□□□□ 0.18
VPS16-205ENST00000453689 FAM105AQ9NUU6 356 aa16.2■□□□□ 0.18
VPS16-205ENST00000453689 EOMESO95936 686 aa16.19■□□□□ 0.18
VPS16-205ENST00000453689 PLCG1P19174 1290 aa16.19■□□□□ 0.18
VPS16-205ENST00000453689 POU3F3P20264 500 aaPredicted RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms