RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 GPR149Q86SP6 731 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 BCL7CQ8WUZ0 217 aaPredicted RBP13.12□□□□□ -0.31
HERC3-207ENST00000452979 AUTS2Q8WXX7 1259 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 BRF1Q92994 677 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 SCLT1Q96NL6 688 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 FDXACB1Q9BRP7 624 aaPredicted RBP13.12□□□□□ -0.31
HERC3-207ENST00000452979 SH3GLB2Q9NR46 395 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 CYP26B1Q9NR63 512 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 FAM105AQ9NUU6 356 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 STK39Q9UEW8 545 aa13.12□□□□□ -0.31
HERC3-207ENST00000452979 DBR1Q9UK59 544 aaKnown RBP13.12□□□□□ -0.31
HERC3-207ENST00000452979 CHMP2AO43633 222 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 LILRB3O75022 631 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 ZC3H11AO75152 810 aaKnown RBP eCLIP13.11□□□□□ -0.31
HERC3-207ENST00000452979 IFNAR1P17181 557 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 RAB27AP51159 221 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 EVCP57679 992 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 FOXK2Q01167 660 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 AKAP17AQ02040 695 aaKnown RBP13.11□□□□□ -0.31
HERC3-207ENST00000452979 PTPN14Q15678 1187 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 MTERF2Q49AM1 385 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 TWF2Q6IBS0 349 aaKnown RBP13.11□□□□□ -0.31
HERC3-207ENST00000452979 MRPL10Q7Z7H8 261 aaKnown RBP13.11□□□□□ -0.31
HERC3-207ENST00000452979 TMEM87AQ8NBN3 555 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 LPPQ93052 612 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 GJA10Q969M2 543 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 MBOAT7Q96N66 472 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 VN1R3Q9BXE9 311 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 SFXN1Q9H9B4 322 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 SUCLA2Q9P2R7 463 aaPredicted RBP13.11□□□□□ -0.31
HERC3-207ENST00000452979 DNAJB4Q9UDY4 337 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 SEPT9Q9UHD8 586 aaPredicted RBP13.11□□□□□ -0.31
HERC3-207ENST00000452979 CACNA1HO95180 2353 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 C2orf16Q68DN1 1984 aa13.11□□□□□ -0.31
HERC3-207ENST00000452979 TMEM150BA6NC51 233 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 PRR23AA6NEV1 266 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 MEIS3P2A8K0S8 358 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 CA8P35219 290 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 TMC5Q6UXY8 1006 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 ANO5Q75V66 913 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 MIER3Q7Z3K6 550 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 CABP7Q86V35 215 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 ZNF280BQ86YH2 543 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 RHPN2Q8IUC4 686 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 KSR1Q8IVT5 923 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 FEZF2Q8TBJ5 459 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 TBCKQ8TEA7 893 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 ACSF2Q96CM8 615 aaPredicted RBP13.1□□□□□ -0.31
HERC3-207ENST00000452979 PGBD4Q96DM1 585 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 KLHL5Q96PQ7 755 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 SLC26A6Q9BXS9 759 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 C22orf23Q9BZE7 217 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 IFT122Q9HBG6 1241 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 VPS54Q9P1Q0 977 aa13.1□□□□□ -0.31
HERC3-207ENST00000452979 PIN4Q9Y237 131 aaKnown RBP13.1□□□□□ -0.31
HERC3-207ENST00000452979 M0R2N6 131 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 ALDH2P05091 517 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 NPR3P17342 541 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 RPS6KB1P23443 525 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 PDIA3P30101 505 aaKnown RBP13.09□□□□□ -0.31
HERC3-207ENST00000452979 HSPA4P34932 840 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 SLC11A1P49279 550 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 CLCN4P51793 760 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 RNASELQ05823 741 aaKnown RBP13.09□□□□□ -0.31
HERC3-207ENST00000452979 TDGQ13569 410 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 LONRF3Q496Y0 759 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 BLOC1S2Q6QNY1 142 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 MOXD1Q6UVY6 613 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 AGMOQ6ZNB7 445 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 C15orf39Q6ZRI6 1047 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 OTOP3Q7RTS5 596 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 ETNPPLQ8TBG4 499 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 JAKMIP1Q96N16 626 aaKnown RBP13.09□□□□□ -0.31
HERC3-207ENST00000452979 JPH2Q9BR39 696 aaPredicted RBP13.09□□□□□ -0.31
HERC3-207ENST00000452979 TMEM175Q9BSA9 504 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 EMILIN2Q9BXX0 1053 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 MFSD1Q9H3U5 465 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 AGPAT5Q9NUQ2 364 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 PCDHA4Q9UN74 947 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 PCDHB2Q9Y5E7 798 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 SNX14Q9Y5W7 946 aa13.09□□□□□ -0.31
HERC3-207ENST00000452979 DDX11L8A8MPP1 907 aa13.08□□□□□ -0.32
HERC3-207ENST00000452979 B4GALT3O60512 393 aa13.08□□□□□ -0.32
HERC3-207ENST00000452979 DDHD2O94830 711 aa13.08□□□□□ -0.32
HERC3-207ENST00000452979 CNPP09543 421 aaKnown RBP13.08□□□□□ -0.32
HERC3-207ENST00000452979 AOC1P19801 751 aa13.08□□□□□ -0.32
HERC3-207ENST00000452979 NLRP5P59047 1200 aa13.08□□□□□ -0.32
HERC3-207ENST00000452979 PSMC5P62195 406 aa13.08□□□□□ -0.32
HERC3-207ENST00000452979 LETM2Q2VYF4 491 aa13.08□□□□□ -0.32
HERC3-207ENST00000452979 CWF19L1Q69YN2 538 aaKnown RBP13.08□□□□□ -0.32
HERC3-207ENST00000452979 CATSPER4Q7RTX7 472 aa13.08□□□□□ -0.32
HERC3-207ENST00000452979 FAM177A1Q8N128 213 aaPredicted RBP13.08□□□□□ -0.32
HERC3-207ENST00000452979 CMASQ8NFW8 434 aaPredicted RBP13.08□□□□□ -0.32
HERC3-207ENST00000452979 SH2D3AQ9BRG2 576 aa13.08□□□□□ -0.32
HERC3-207ENST00000452979 RHOBTB2Q9BYZ6 727 aa13.08□□□□□ -0.32
HERC3-207ENST00000452979 KCNK12Q9HB15 430 aa13.08□□□□□ -0.32
HERC3-207ENST00000452979 KANSL3Q9P2N6 904 aa13.08□□□□□ -0.32
HERC3-207ENST00000452979 INPP5FQ9Y2H2 1132 aa13.08□□□□□ -0.32
HERC3-207ENST00000452979 CNTNAP2Q9UHC6 1331 aa13.08□□□□□ -0.32
HERC3-207ENST00000452979 PAPLNO95428 1278 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms