RNA–Protein interactions for RNA: ENST00000452226.5

PDLIM2-214, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2

Gene PDLIM2, Length 845 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-214ENST00000452226 NLRP4Q96MN2 994 aa20.58■□□□□ 0.89
PDLIM2-214ENST00000452226 TCF25Q9BQ70 676 aa20.58■□□□□ 0.89
PDLIM2-214ENST00000452226 PHKA2P46019 1235 aa20.57■□□□□ 0.88
PDLIM2-214ENST00000452226 TWF2Q6IBS0 349 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-214ENST00000452226 POTEDQ86YR6 584 aa20.57■□□□□ 0.88
PDLIM2-214ENST00000452226 ZNF579Q8NAF0 562 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-214ENST00000452226 SLC7A3Q8WY07 619 aa20.57■□□□□ 0.88
PDLIM2-214ENST00000452226 CEP170P1Q96L14 293 aa20.57■□□□□ 0.88
PDLIM2-214ENST00000452226 MRPL9Q9BYD2 267 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-214ENST00000452226 FOXP1Q9H334 677 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-214ENST00000452226 WRAP73Q9P2S5 460 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-214ENST00000452226 PIN4Q9Y237 131 aaKnown RBP20.57■□□□□ 0.88
PDLIM2-214ENST00000452226 USP15Q9Y4E8 981 aaPredicted RBP20.57■□□□□ 0.88
PDLIM2-214ENST00000452226 PIEZO1Q92508 2521 aa20.57■□□□□ 0.88
PDLIM2-214ENST00000452226 POLGP54098 1239 aaPredicted RBP20.56■□□□□ 0.88
PDLIM2-214ENST00000452226 EPHA7Q15375 998 aa20.56■□□□□ 0.88
PDLIM2-214ENST00000452226 NCAPH2Q6IBW4 605 aa20.56■□□□□ 0.88
PDLIM2-214ENST00000452226 CATSPER4Q7RTX7 472 aa20.56■□□□□ 0.88
PDLIM2-214ENST00000452226 TMC7Q7Z402 723 aa20.56■□□□□ 0.88
PDLIM2-214ENST00000452226 RNF135Q8IUD6 432 aa20.56■□□□□ 0.88
PDLIM2-214ENST00000452226 EXOC8Q8IYI6 725 aa20.56■□□□□ 0.88
PDLIM2-214ENST00000452226 LXNQ9BS40 222 aa20.56■□□□□ 0.88
PDLIM2-214ENST00000452226 TRAIPQ9BWF2 469 aa20.56■□□□□ 0.88
PDLIM2-214ENST00000452226 NGRNQ9NPE2 291 aaKnown RBP20.56■□□□□ 0.88
PDLIM2-214ENST00000452226 MUTYHQ9UIF7 546 aa20.56■□□□□ 0.88
PDLIM2-214ENST00000452226 COL4A3BPQ9Y5P4 624 aa20.56■□□□□ 0.88
PDLIM2-214ENST00000452226 HIDE1A8MVS5 230 aa20.55■□□□□ 0.88
PDLIM2-214ENST00000452226 WNT7AO00755 349 aa20.55■□□□□ 0.88
PDLIM2-214ENST00000452226 BAG4O95429 457 aaKnown RBP20.55■□□□□ 0.88
PDLIM2-214ENST00000452226 SKIP12755 728 aa20.55■□□□□ 0.88
PDLIM2-214ENST00000452226 ALDH7A1P49419 539 aaKnown RBP20.55■□□□□ 0.88
PDLIM2-214ENST00000452226 LONRF3Q496Y0 759 aa20.55■□□□□ 0.88
PDLIM2-214ENST00000452226 C4orf19Q8IY42 314 aa20.55■□□□□ 0.88
PDLIM2-214ENST00000452226 SLFN12Q8IYM2 578 aa20.55■□□□□ 0.88
PDLIM2-214ENST00000452226 SLC39A11Q8N1S5 342 aa20.55■□□□□ 0.88
PDLIM2-214ENST00000452226 LPPQ93052 612 aa20.55■□□□□ 0.88
PDLIM2-214ENST00000452226 IFT122Q9HBG6 1241 aa20.55■□□□□ 0.88
PDLIM2-214ENST00000452226 RGL1Q9NZL6 768 aa20.55■□□□□ 0.88
PDLIM2-214ENST00000452226 PPME1Q9Y570 386 aa20.55■□□□□ 0.88
PDLIM2-214ENST00000452226 ARID2Q68CP9 1835 aa20.55■□□□□ 0.88
PDLIM2-214ENST00000452226 TECTAO75443 2155 aa20.54■□□□□ 0.88
PDLIM2-214ENST00000452226 SRGAP2BP0DMP2 458 aa20.54■□□□□ 0.88
PDLIM2-214ENST00000452226 YWHABP31946 246 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-214ENST00000452226 RFC5P40937 340 aa20.54■□□□□ 0.88
PDLIM2-214ENST00000452226 BCAR1P56945 870 aa20.54■□□□□ 0.88
PDLIM2-214ENST00000452226 HERC4Q5GLZ8 1057 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-214ENST00000452226 TMEM184AQ6ZMB5 413 aa20.54■□□□□ 0.88
PDLIM2-214ENST00000452226 OTUD6AQ7L8S5 288 aa20.54■□□□□ 0.88
PDLIM2-214ENST00000452226 PRPF31Q8WWY3 499 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-214ENST00000452226 PSPC1Q8WXF1 523 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-214ENST00000452226 TMEM143Q96AN5 459 aa20.54■□□□□ 0.88
PDLIM2-214ENST00000452226 DYDC2Q96IM9 177 aa20.54■□□□□ 0.88
PDLIM2-214ENST00000452226 DHX33Q9H6R0 707 aaKnown RBP20.54■□□□□ 0.88
PDLIM2-214ENST00000452226 BMP2KQ9NSY1 1161 aaPredicted RBP20.54■□□□□ 0.88
PDLIM2-214ENST00000452226 FAM105AQ9NUU6 356 aa20.54■□□□□ 0.88
PDLIM2-214ENST00000452226 NT5C1B-RDH14C9J2C7 533 aa20.53■□□□□ 0.88
PDLIM2-214ENST00000452226 SRGAP2CP0DJJ0 459 aa20.53■□□□□ 0.88
PDLIM2-214ENST00000452226 U2AF2P26368 475 aaKnown RBP eCLIP20.53■□□□□ 0.88
PDLIM2-214ENST00000452226 TECP42680 631 aa20.53■□□□□ 0.88
PDLIM2-214ENST00000452226 RAB27AP51159 221 aa20.53■□□□□ 0.88
PDLIM2-214ENST00000452226 CYP4A11Q02928 519 aa20.53■□□□□ 0.88
PDLIM2-214ENST00000452226 SPIRE1Q08AE8 756 aa20.53■□□□□ 0.88
PDLIM2-214ENST00000452226 KCNC3Q14003 757 aa20.53■□□□□ 0.88
PDLIM2-214ENST00000452226 LLGL2Q6P1M3 1020 aa20.53■□□□□ 0.88
PDLIM2-214ENST00000452226 GLB1LQ6UWU2 654 aa20.53■□□□□ 0.88
PDLIM2-214ENST00000452226 ALYREFQ86V81 257 aaKnown RBP20.53■□□□□ 0.88
PDLIM2-214ENST00000452226 RSPH1Q8WYR4 309 aa20.53■□□□□ 0.88
PDLIM2-214ENST00000452226 PHF7Q9BWX1 381 aaPredicted RBP20.53■□□□□ 0.88
PDLIM2-214ENST00000452226 ZSWIM4Q9H7M6 989 aa20.53■□□□□ 0.88
PDLIM2-214ENST00000452226 KIF3AQ9Y496 699 aa20.53■□□□□ 0.88
PDLIM2-214ENST00000452226 LOC730098B7Z3J9 87 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 ZBTB39O15060 712 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 ZNF623O75123 536 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 ZC3H11AO75152 810 aaKnown RBP eCLIP20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 GJB2P29033 226 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 LAMTOR4Q0VGL1 99 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 CUL4AQ13619 759 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 CTTNQ14247 550 aaKnown RBP20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 SMC1AQ14683 1233 aaKnown RBP20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 XKR9Q5GH70 373 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 NOMO2Q5JPE7 1267 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 ANKRD54Q6NXT1 300 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 SRGAP1Q7Z6B7 1085 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 NOSTRINQ8IVI9 506 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 TPH2Q8IWU9 490 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 MRPL43Q8N983 215 aaKnown RBP20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 SUSD6Q92537 303 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 TMEM169Q96HH4 297 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 MTMR9Q96QG7 549 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 AGPAT5Q9NUQ2 364 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 INPP5FQ9Y2H2 1132 aa20.52■□□□□ 0.88
PDLIM2-214ENST00000452226 MEIS3P2A8K0S8 358 aa20.51■□□□□ 0.87
PDLIM2-214ENST00000452226 GAS2O43903 313 aaKnown RBP20.51■□□□□ 0.87
PDLIM2-214ENST00000452226 EMC2Q15006 297 aa20.51■□□□□ 0.87
PDLIM2-214ENST00000452226 TCP11Q8WWU5 503 aa20.51■□□□□ 0.87
PDLIM2-214ENST00000452226 EDAQ92838 391 aa20.51■□□□□ 0.87
PDLIM2-214ENST00000452226 RPGRIP1Q96KN7 1286 aa20.51■□□□□ 0.87
PDLIM2-214ENST00000452226 S1PR5Q9H228 398 aa20.51■□□□□ 0.87
PDLIM2-214ENST00000452226 MINDY3Q9H8M7 445 aa20.51■□□□□ 0.87
PDLIM2-214ENST00000452226 TBC1D13Q9NVG8 400 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms