RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 DZANK1Q9NVP4 752 aa12.23□□□□□ -0.45
USP1-204ENST00000452143 STK39Q9UEW8 545 aa12.23□□□□□ -0.45
USP1-204ENST00000452143 PIN4Q9Y237 131 aaKnown RBP12.23□□□□□ -0.45
USP1-204ENST00000452143 PPME1Q9Y570 386 aa12.23□□□□□ -0.45
USP1-204ENST00000452143 IRAK3Q9Y616 596 aa12.23□□□□□ -0.45
USP1-204ENST00000452143 ZFHX2Q9C0A1 2572 aaPredicted RBP12.23□□□□□ -0.45
USP1-204ENST00000452143 A0A087WZ62 844 aa12.22□□□□□ -0.45
USP1-204ENST00000452143 DKC1O60832 514 aaKnown RBP eCLIP12.22□□□□□ -0.45
USP1-204ENST00000452143 ZC3H11AO75152 810 aaKnown RBP eCLIP12.22□□□□□ -0.45
USP1-204ENST00000452143 MAFO75444 373 aaPredicted RBP12.22□□□□□ -0.45
USP1-204ENST00000452143 STBD1O95210 358 aa12.22□□□□□ -0.45
USP1-204ENST00000452143 FGFR4P22455 802 aa12.22□□□□□ -0.45
USP1-204ENST00000452143 PSMC5P62195 406 aa12.22□□□□□ -0.45
USP1-204ENST00000452143 MTMR3Q13615 1198 aa12.22□□□□□ -0.45
USP1-204ENST00000452143 NONOQ15233 471 aaKnown RBP eCLIP12.22□□□□□ -0.45
USP1-204ENST00000452143 NPY5RQ15761 445 aa12.22□□□□□ -0.45
USP1-204ENST00000452143 TWF2Q6IBS0 349 aaKnown RBP12.22□□□□□ -0.45
USP1-204ENST00000452143 GLB1LQ6UWU2 654 aa12.22□□□□□ -0.45
USP1-204ENST00000452143 KRT25Q7Z3Z0 450 aa12.22□□□□□ -0.45
USP1-204ENST00000452143 ZBTB33Q86T24 672 aa12.22□□□□□ -0.45
USP1-204ENST00000452143 EXOC8Q8IYI6 725 aa12.22□□□□□ -0.45
USP1-204ENST00000452143 GJA10Q969M2 543 aa12.22□□□□□ -0.45
USP1-204ENST00000452143 ZNF274Q96GC6 653 aaPredicted RBP12.22□□□□□ -0.45
USP1-204ENST00000452143 FDXACB1Q9BRP7 624 aaPredicted RBP12.22□□□□□ -0.45
USP1-204ENST00000452143 ZBP1Q9H171 429 aa12.22□□□□□ -0.45
USP1-204ENST00000452143 ADAM7Q9H2U9 754 aa12.22□□□□□ -0.45
USP1-204ENST00000452143 DDX25Q9UHL0 483 aaKnown RBP12.22□□□□□ -0.45
USP1-204ENST00000452143 DMDP11532 3685 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.21□□□□□ -0.45
USP1-204ENST00000452143 TMEM150BA6NC51 233 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 CLASP2O75122 1294 aaKnown RBP12.21□□□□□ -0.45
USP1-204ENST00000452143 ZNF623O75123 536 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 CSDE1O75534 798 aaKnown RBP12.21□□□□□ -0.45
USP1-204ENST00000452143 CTSAP10619 480 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 GCFC2P16383 781 aaKnown RBP12.21□□□□□ -0.45
USP1-204ENST00000452143 MTHFRP42898 656 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 NUBP1P53384 320 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 PPP2R5CQ13362 524 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 ANO5Q75V66 913 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 RHPN2Q8IUC4 686 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 UBALD2Q8IYN6 164 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 SLC7A3Q8WY07 619 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 PGBD4Q96DM1 585 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 RIPOR3Q96MK2 946 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 NLRP4Q96MN2 994 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 TM6SF1Q9BZW5 370 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 IRF2BPLQ9H1B7 796 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 CYP26B1Q9NR63 512 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 AGPAT5Q9NUQ2 364 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 FAM105AQ9NUU6 356 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 TBC1D13Q9NVG8 400 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 SUCLA2Q9P2R7 463 aaPredicted RBP12.21□□□□□ -0.45
USP1-204ENST00000452143 SORCS3Q9UPU3 1222 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 CYP46A1Q9Y6A2 500 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 MYO10Q9HD67 2058 aa12.21□□□□□ -0.45
USP1-204ENST00000452143 GAS2O43903 313 aaKnown RBP12.2□□□□□ -0.46
USP1-204ENST00000452143 CDKL5O76039 1030 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 CA8P35219 290 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 QARSP47897 775 aaKnown RBP12.2□□□□□ -0.46
USP1-204ENST00000452143 RNASELQ05823 741 aaKnown RBP12.2□□□□□ -0.46
USP1-204ENST00000452143 NOMO2Q5JPE7 1267 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 IER5LQ5T953 404 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 PPP4R3AQ6IN85 833 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 KIAA1841Q6NSI8 718 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 CATSPER4Q7RTX7 472 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 DDX53Q86TM3 631 aaKnown RBP12.2□□□□□ -0.46
USP1-204ENST00000452143 TMEM173Q86WV6 379 aaPredicted RBP12.2□□□□□ -0.46
USP1-204ENST00000452143 VPS52Q8N1B4 723 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 IGSF21Q96ID5 467 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 FAM20AQ96MK3 541 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 NAP1L4Q99733 375 aaKnown RBP12.2□□□□□ -0.46
USP1-204ENST00000452143 SH2D3AQ9BRG2 576 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 APOL5Q9BWW9 433 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 POMKQ9H5K3 350 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 KCNMB3Q9NPA1 279 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 TSHZ2Q9NRE2 1034 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 VAV3Q9UKW4 847 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 USTQ9Y2C2 406 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 COL4A3BPQ9Y5P4 624 aa12.2□□□□□ -0.46
USP1-204ENST00000452143 C2orf16Q68DN1 1984 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 CFAP54Q96N23 3096 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 STK36Q9NRP7 1315 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 CNTNAP2Q9UHC6 1331 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 DDX11L8A8MPP1 907 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 NT5C1B-RDH14C9J2C7 533 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 TBX3O15119 743 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 SLC37A4O43826 429 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 CXCL14O95715 111 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 XBP1P17861 261 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 SP100P23497 879 aaPredicted RBP12.19□□□□□ -0.46
USP1-204ENST00000452143 RFC5P40937 340 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 TCF15Q12870 199 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 PCBP1Q15365 356 aaKnown RBP eCLIP12.19□□□□□ -0.46
USP1-204ENST00000452143 INF2Q27J81 1249 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 LETM2Q2VYF4 491 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 PLA2G4FQ68DD2 849 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 SRGAP1Q7Z6B7 1085 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 NEK8Q86SG6 692 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 PPFIBP1Q86W92 1011 aa12.19□□□□□ -0.46
USP1-204ENST00000452143 TDRD5Q8NAT2 981 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms