RNA–Protein interactions for RNA: ENST00000451893.5

C9orf3-208, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-208ENST00000451893 POP1Q99575 1024 aaKnown RBP24.12■■□□□ 1.45
C9orf3-208ENST00000451893 TTC12Q9H892 705 aaPredicted RBP24.12■■□□□ 1.45
C9orf3-208ENST00000451893 PRKAG3Q9UGI9 489 aa24.12■■□□□ 1.45
C9orf3-208ENST00000451893 KIF3AQ9Y496 699 aa24.12■■□□□ 1.45
C9orf3-208ENST00000451893 ALDH7A1P49419 539 aaKnown RBP24.11■■□□□ 1.45
C9orf3-208ENST00000451893 HMGN5P82970 282 aaKnown RBP24.11■■□□□ 1.45
C9orf3-208ENST00000451893 RNASELQ05823 741 aaKnown RBP24.11■■□□□ 1.45
C9orf3-208ENST00000451893 SMAD4Q13485 552 aaKnown RBP24.11■■□□□ 1.45
C9orf3-208ENST00000451893 COL19A1Q14993 1142 aa24.11■■□□□ 1.45
C9orf3-208ENST00000451893 CTC1Q2NKJ3 1217 aa24.11■■□□□ 1.45
C9orf3-208ENST00000451893 LONRF3Q496Y0 759 aa24.11■■□□□ 1.45
C9orf3-208ENST00000451893 EFHBQ8N7U6 833 aa24.11■■□□□ 1.45
C9orf3-208ENST00000451893 TMEM87AQ8NBN3 555 aa24.11■■□□□ 1.45
C9orf3-208ENST00000451893 MRPS27Q92552 414 aaKnown RBP24.11■■□□□ 1.45
C9orf3-208ENST00000451893 PGBD4Q96DM1 585 aa24.11■■□□□ 1.45
C9orf3-208ENST00000451893 CEP89Q96ST8 783 aa24.11■■□□□ 1.45
C9orf3-208ENST00000451893 TCF25Q9BQ70 676 aa24.11■■□□□ 1.45
C9orf3-208ENST00000451893 EIF2AK1Q9BQI3 630 aaKnown RBP24.11■■□□□ 1.45
C9orf3-208ENST00000451893 EPHX3Q9H6B9 360 aa24.11■■□□□ 1.45
C9orf3-208ENST00000451893 INPP5FQ9Y2H2 1132 aa24.11■■□□□ 1.45
C9orf3-208ENST00000451893 ARID2Q68CP9 1835 aa24.11■■□□□ 1.45
C9orf3-208ENST00000451893 TBX10O75333 385 aa24.1■■□□□ 1.45
C9orf3-208ENST00000451893 ERLIN2O94905 339 aa24.1■■□□□ 1.45
C9orf3-208ENST00000451893 LTBRP36941 435 aa24.1■■□□□ 1.45
C9orf3-208ENST00000451893 PHKA2P46019 1235 aa24.1■■□□□ 1.45
C9orf3-208ENST00000451893 DLX2Q07687 328 aaPredicted RBP24.1■■□□□ 1.45
C9orf3-208ENST00000451893 NCBP1Q09161 790 aaKnown RBP24.1■■□□□ 1.45
C9orf3-208ENST00000451893 ADAM15Q13444 863 aa24.1■■□□□ 1.45
C9orf3-208ENST00000451893 TMEM31Q5JXX7 168 aa24.1■■□□□ 1.45
C9orf3-208ENST00000451893 GLB1LQ6UWU2 654 aa24.1■■□□□ 1.45
C9orf3-208ENST00000451893 TMC7Q7Z402 723 aa24.1■■□□□ 1.45
C9orf3-208ENST00000451893 PRPF31Q8WWY3 499 aaKnown RBP24.1■■□□□ 1.45
C9orf3-208ENST00000451893 SPG21Q9NZD8 308 aa24.1■■□□□ 1.45
C9orf3-208ENST00000451893 WRAP73Q9P2S5 460 aaPredicted RBP24.1■■□□□ 1.45
C9orf3-208ENST00000451893 LZTS1Q9Y250 596 aa24.1■■□□□ 1.45
C9orf3-208ENST00000451893 PCDHGC5Q9Y5F6 944 aa24.1■■□□□ 1.45
C9orf3-208ENST00000451893 PER2O15055 1255 aa24.09■■□□□ 1.45
C9orf3-208ENST00000451893 ASAP2O43150 1006 aa24.09■■□□□ 1.45
C9orf3-208ENST00000451893 MBTPS2O43462 519 aa24.09■■□□□ 1.45
C9orf3-208ENST00000451893 MCM7P33993 719 aa24.09■■□□□ 1.45
C9orf3-208ENST00000451893 PBX3P40426 434 aa24.09■■□□□ 1.45
C9orf3-208ENST00000451893 LAMTOR4Q0VGL1 99 aa24.09■■□□□ 1.45
C9orf3-208ENST00000451893 TFDP1Q14186 410 aa24.09■■□□□ 1.45
C9orf3-208ENST00000451893 CLLU1OSQ5K130 101 aa24.09■■□□□ 1.45
C9orf3-208ENST00000451893 SRGAP1Q7Z6B7 1085 aa24.09■■□□□ 1.45
C9orf3-208ENST00000451893 RNF149Q8NC42 400 aa24.09■■□□□ 1.45
C9orf3-208ENST00000451893 RSPH1Q8WYR4 309 aa24.09■■□□□ 1.45
C9orf3-208ENST00000451893 TNFRSF25Q93038 417 aa24.09■■□□□ 1.45
C9orf3-208ENST00000451893 CDCA3Q99618 268 aaPredicted RBP24.09■■□□□ 1.45
C9orf3-208ENST00000451893 DHX33Q9H6R0 707 aaKnown RBP24.09■■□□□ 1.45
C9orf3-208ENST00000451893 FAM105AQ9NUU6 356 aa24.09■■□□□ 1.45
C9orf3-208ENST00000451893 CARNS1A5YM72 827 aa24.08■■□□□ 1.45
C9orf3-208ENST00000451893 ZC3H11AO75152 810 aaKnown RBP eCLIP24.08■■□□□ 1.45
C9orf3-208ENST00000451893 ALADP13716 330 aa24.08■■□□□ 1.45
C9orf3-208ENST00000451893 PLCB3Q01970 1234 aa24.08■■□□□ 1.45
C9orf3-208ENST00000451893 ST3GAL1Q11201 340 aa24.08■■□□□ 1.45
C9orf3-208ENST00000451893 LRRC55Q6ZSA7 311 aa24.08■■□□□ 1.45
C9orf3-208ENST00000451893 ADHFE1Q8IWW8 467 aa24.08■■□□□ 1.45
C9orf3-208ENST00000451893 ZNF579Q8NAF0 562 aaKnown RBP24.08■■□□□ 1.45
C9orf3-208ENST00000451893 URGCPQ8TCY9 931 aa24.08■■□□□ 1.45
C9orf3-208ENST00000451893 LPPQ93052 612 aa24.08■■□□□ 1.45
C9orf3-208ENST00000451893 TMEM169Q96HH4 297 aa24.08■■□□□ 1.45
C9orf3-208ENST00000451893 NGRNQ9NPE2 291 aaKnown RBP24.08■■□□□ 1.45
C9orf3-208ENST00000451893 RNF19AQ9NV58 838 aa24.08■■□□□ 1.45
C9orf3-208ENST00000451893 BARX2Q9UMQ3 279 aaPredicted RBP24.08■■□□□ 1.45
C9orf3-208ENST00000451893 GJB2P29033 226 aa24.07■■□□□ 1.44
C9orf3-208ENST00000451893 ERVFC1P60507 584 aa24.07■■□□□ 1.44
C9orf3-208ENST00000451893 MXD4Q14582 209 aaPredicted RBP24.07■■□□□ 1.44
C9orf3-208ENST00000451893 GBP3Q9H0R5 595 aa24.07■■□□□ 1.44
C9orf3-208ENST00000451893 CD320Q9NPF0 282 aa24.07■■□□□ 1.44
C9orf3-208ENST00000451893 AGPAT5Q9NUQ2 364 aa24.07■■□□□ 1.44
C9orf3-208ENST00000451893 SLITRK3O94933 977 aa24.06■■□□□ 1.44
C9orf3-208ENST00000451893 ZP2Q05996 745 aa24.06■■□□□ 1.44
C9orf3-208ENST00000451893 SPIRE1Q08AE8 756 aa24.06■■□□□ 1.44
C9orf3-208ENST00000451893 SMAD2Q15796 467 aaKnown RBP24.06■■□□□ 1.44
C9orf3-208ENST00000451893 ZNF598Q86UK7 904 aaKnown RBP24.06■■□□□ 1.44
C9orf3-208ENST00000451893 FERMT3Q86UX7 667 aa24.06■■□□□ 1.44
C9orf3-208ENST00000451893 ERMNQ8TAM6 284 aa24.06■■□□□ 1.44
C9orf3-208ENST00000451893 FAM193BQ96PV7 902 aaPredicted RBP24.06■■□□□ 1.44
C9orf3-208ENST00000451893 IFT122Q9HBG6 1241 aa24.06■■□□□ 1.44
C9orf3-208ENST00000451893 BDP1A6H8Y1 2624 aa24.06■■□□□ 1.44
C9orf3-208ENST00000451893 DGAT1O75907 488 aa24.05■■□□□ 1.44
C9orf3-208ENST00000451893 ATF7P17544 494 aaPredicted RBP24.05■■□□□ 1.44
C9orf3-208ENST00000451893 BCAR1P56945 870 aa24.05■■□□□ 1.44
C9orf3-208ENST00000451893 SMC1AQ14683 1233 aaKnown RBP24.05■■□□□ 1.44
C9orf3-208ENST00000451893 DUSP6Q16828 381 aa24.05■■□□□ 1.44
C9orf3-208ENST00000451893 NOMO2Q5JPE7 1267 aa24.05■■□□□ 1.44
C9orf3-208ENST00000451893 LLGL2Q6P1M3 1020 aa24.05■■□□□ 1.44
C9orf3-208ENST00000451893 CLEC17AQ6ZS10 378 aa24.05■■□□□ 1.44
C9orf3-208ENST00000451893 TRAIPQ9BWF2 469 aa24.05■■□□□ 1.44
C9orf3-208ENST00000451893 ANKEF1Q9NU02 776 aa24.05■■□□□ 1.44
C9orf3-208ENST00000451893 NOL7Q9UMY1 257 aaKnown RBP24.05■■□□□ 1.44
C9orf3-208ENST00000451893 HCN4Q9Y3Q4 1203 aa24.05■■□□□ 1.44
C9orf3-208ENST00000451893 PCDHB2Q9Y5E7 798 aa24.05■■□□□ 1.44
C9orf3-208ENST00000451893 MUC3AQ02505 3323 aa24.04■■□□□ 1.44
C9orf3-208ENST00000451893 FAM86C2PA6NEL3 165 aa24.04■■□□□ 1.44
C9orf3-208ENST00000451893 POTEMA6NI47 508 aa24.04■■□□□ 1.44
C9orf3-208ENST00000451893 NT5C1B-RDH14C9J2C7 533 aa24.04■■□□□ 1.44
C9orf3-208ENST00000451893 PI4K2BG5E9Z4 385 aa24.04■■□□□ 1.44
C9orf3-208ENST00000451893 INO80B-WBP1J3KQ70 363 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms