RNA–Protein interactions for RNA: ENST00000450482.5

SS18L1-203, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18L1, Length 781 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-203ENST00000450482 NECTIN4Q96NY8 510 aa13.06□□□□□ -0.32
SS18L1-203ENST00000450482 PRRX2Q99811 253 aa13.06□□□□□ -0.32
SS18L1-203ENST00000450482 JPH2Q9BR39 696 aaPredicted RBP13.06□□□□□ -0.32
SS18L1-203ENST00000450482 LARP6Q9BRS8 491 aaKnown RBP13.06□□□□□ -0.32
SS18L1-203ENST00000450482 CYP26B1Q9NR63 512 aa13.06□□□□□ -0.32
SS18L1-203ENST00000450482 AGPAT5Q9NUQ2 364 aa13.06□□□□□ -0.32
SS18L1-203ENST00000450482 PPME1Q9Y570 386 aa13.06□□□□□ -0.32
SS18L1-203ENST00000450482 PLXNA4Q9HCM2 1894 aa13.06□□□□□ -0.32
SS18L1-203ENST00000450482 OFD1O75665 1012 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 GALTP07902 379 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 CTSAP10619 480 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 GCFC2P16383 781 aaKnown RBP13.05□□□□□ -0.32
SS18L1-203ENST00000450482 QARSP47897 775 aaKnown RBP13.05□□□□□ -0.32
SS18L1-203ENST00000450482 PTPN5P54829 565 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 TCF15Q12870 199 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 LETM2Q2VYF4 491 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 NOMO2Q5JPE7 1267 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 CES5AQ6NT32 575 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 CATSPER4Q7RTX7 472 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 VPS52Q8N1B4 723 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 SLC7A3Q8WY07 619 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 PHF20Q9BVI0 1012 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 POMKQ9H5K3 350 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 DHX33Q9H6R0 707 aaKnown RBP13.05□□□□□ -0.32
SS18L1-203ENST00000450482 NRDE2Q9H7Z3 1164 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 DZANK1Q9NVP4 752 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 WRAP73Q9P2S5 460 aaPredicted RBP13.05□□□□□ -0.32
SS18L1-203ENST00000450482 KCNJ14Q9UNX9 436 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 NR2E1Q9Y466 385 aa13.05□□□□□ -0.32
SS18L1-203ENST00000450482 FNDC1Q4ZHG4 1894 aaPredicted RBP13.05□□□□□ -0.32
SS18L1-203ENST00000450482 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.04□□□□□ -0.32
SS18L1-203ENST00000450482 TBX3O15119 743 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 B4GALT3O60512 393 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 DKC1O60832 514 aaKnown RBP eCLIP13.04□□□□□ -0.32
SS18L1-203ENST00000450482 CDKL5O76039 1030 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 CXCL14O95715 111 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 P4HBP07237 508 aaKnown RBP13.04□□□□□ -0.32
SS18L1-203ENST00000450482 SP100P23497 879 aaPredicted RBP13.04□□□□□ -0.32
SS18L1-203ENST00000450482 VCPP55072 806 aaKnown RBP13.04□□□□□ -0.32
SS18L1-203ENST00000450482 NPEPPSP55786 919 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 STK3Q13188 491 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 GIT2Q14161 759 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 BMS1Q14692 1282 aaKnown RBP13.04□□□□□ -0.32
SS18L1-203ENST00000450482 AGMOQ6ZNB7 445 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 MRPL10Q7Z7H8 261 aaKnown RBP13.04□□□□□ -0.32
SS18L1-203ENST00000450482 NEK8Q86SG6 692 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 ZNF579Q8NAF0 562 aaKnown RBP13.04□□□□□ -0.32
SS18L1-203ENST00000450482 AUTS2Q8WXX7 1259 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 HAS1Q92839 578 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 VN1R3Q9BXE9 311 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 PDRG1Q9NUG6 133 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 PCDHB2Q9Y5E7 798 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 COL4A3BPQ9Y5P4 624 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 STK36Q9NRP7 1315 aa13.04□□□□□ -0.32
SS18L1-203ENST00000450482 CCDC194A0A1B0GVG4 234 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 C2CD4DB7Z1M9 353 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 HOXA11P31270 313 aaPredicted RBP13.03□□□□□ -0.32
SS18L1-203ENST00000450482 RFC5P40937 340 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 MTHFRP42898 656 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 SLC11A1P49279 550 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 SCRN1Q12765 414 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 MTMR3Q13615 1198 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 PTPN14Q15678 1187 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 LONRF3Q496Y0 759 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 KIAA1841Q6NSI8 718 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 C4orf19Q8IY42 314 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 EXOC8Q8IYI6 725 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 UBALD2Q8IYN6 164 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 KREMEN2Q8NCW0 462 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 SLC22A17Q8WUG5 538 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 PRPF31Q8WWY3 499 aaKnown RBP13.03□□□□□ -0.32
SS18L1-203ENST00000450482 PSPC1Q8WXF1 523 aaKnown RBP13.03□□□□□ -0.32
SS18L1-203ENST00000450482 PGBD4Q96DM1 585 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 CEP170P1Q96L14 293 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 RIPOR3Q96MK2 946 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 PHOX2BQ99453 314 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 MINDY3Q9H8M7 445 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 TSHZ2Q9NRE2 1034 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 DNAJB4Q9UDY4 337 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 STK39Q9UEW8 545 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 SORCS3Q9UPU3 1222 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 INPP5FQ9Y2H2 1132 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 ZDBF2Q9HCK1 2354 aa13.03□□□□□ -0.32
SS18L1-203ENST00000450482 GAS2O43903 313 aaKnown RBP13.02□□□□□ -0.33
SS18L1-203ENST00000450482 EPCAMP16422 314 aa13.02□□□□□ -0.33
SS18L1-203ENST00000450482 AVPR2P30518 371 aa13.02□□□□□ -0.33
SS18L1-203ENST00000450482 YWHABP31946 246 aaKnown RBP13.02□□□□□ -0.33
SS18L1-203ENST00000450482 AFF1P51825 1210 aaKnown RBP13.02□□□□□ -0.33
SS18L1-203ENST00000450482 RNASELQ05823 741 aaKnown RBP13.02□□□□□ -0.33
SS18L1-203ENST00000450482 SPIRE1Q08AE8 756 aa13.02□□□□□ -0.33
SS18L1-203ENST00000450482 LAMTOR4Q0VGL1 99 aa13.02□□□□□ -0.33
SS18L1-203ENST00000450482 EPHA7Q15375 998 aa13.02□□□□□ -0.33
SS18L1-203ENST00000450482 UBXN11Q5T124 520 aa13.02□□□□□ -0.33
SS18L1-203ENST00000450482 RARS2Q5T160 578 aaKnown RBP13.02□□□□□ -0.33
SS18L1-203ENST00000450482 SRGAP1Q7Z6B7 1085 aa13.02□□□□□ -0.33
SS18L1-203ENST00000450482 ZNF280BQ86YH2 543 aa13.02□□□□□ -0.33
SS18L1-203ENST00000450482 ZDHHC14Q8IZN3 488 aa13.02□□□□□ -0.33
SS18L1-203ENST00000450482 C12orf76Q8N812 135 aaPredicted RBP13.02□□□□□ -0.33
SS18L1-203ENST00000450482 OXER1Q8TDS5 423 aa13.02□□□□□ -0.33
SS18L1-203ENST00000450482 TMEM143Q96AN5 459 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms